Literature DB >> 24172921

High-resolution flow karyotyping and chromosome sorting in Vicia faba lines with standard and reconstructed karyotypes.

J Doležel1, S Lucretti.   

Abstract

Flow cytometric analysis has been performed on chromosomes isolated from formaldehyde-fixed root tips in a Vicia faba (2n = 12) line with a standard (wild-type) karyotype and in six V. faba translocation lines with reconstructed karyotypes. The resolution of individual chromosome types on histograms of chromosome fluorescence intensity (flow karyotypes) depended on the type of fluorochrome used for chromosome staining. The highest degree of resolution was achieved with 4',6-diamidino-2-phenylindole (DAPI). The lower resolution obtained after staining with mithramycin A (MIT) and propidium iodide (PI) was probably due to the sensitivity of these stains to changes in chromatin structure induced by formaldehyde fixation. After the staining with DAPI, only 1 chromosome type could be discriminated in the line with a standard karyotype. In the translocation lines, the number of chromosome types resolved on flow karyotypes ranged from 2 in the G and the ACB lines to all (6) chromosome types in the EFK and EF lines. Refined flow karyotyping permitted the sorting of a total of 15 different chromosome types from five of the translocation lines. It is expected that flow sorting of chromosomes from reconstructed karyotypes will become a powerful tool in the study of nuclear genome organisation in V. faba.

Entities:  

Year:  1995        PMID: 24172921     DOI: 10.1007/BF00222014

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  13 in total

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Authors:  R L Becker; U V Mikel
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2.  Monoparametric models of flow cytometric karyotypes with spreadsheet software.

Authors:  J Conia; P Muller; S Brown; C Bergounioux; P Gadal
Journal:  Theor Appl Genet       Date:  1989-02       Impact factor: 5.699

Review 3.  Nonintercalating DNA-binding ligands: specificity of the interaction and their use as tools in biophysical, biochemical and biological investigations of the genetic material.

Authors:  C Zimmer; U Wähnert
Journal:  Prog Biophys Mol Biol       Date:  1986       Impact factor: 3.667

4.  Quantification of the DNA content of structurally abnormal X chromosomes and X chromosome aneuploidy using high resolution bivariate flow karyotyping.

Authors:  B Trask; G van den Engh; R Nussbaum; C Schwartz; J Gray
Journal:  Cytometry       Date:  1990

5.  A high-yield procedure for isolation of metaphase chromosomes from root tips of Vicia faba L.

Authors:  J Doležel; J Cíhalíková; S Lucretti
Journal:  Planta       Date:  1992-08       Impact factor: 4.116

6.  Application of flow karyotyping in prenatal detection of chromosome aberrations.

Authors:  J W Gray; B Trask; G van den Engh; A Silva; C Lozes; S Grell; S Schonberg; L C Yu; M S Golbus
Journal:  Am J Hum Genet       Date:  1988-01       Impact factor: 11.025

7.  Low-frequency chimeric yeast artificial chromosome libraries from flow-sorted human chromosomes 16 and 21.

Authors:  M K McCormick; E Campbell; L Deaven; R Moyzis
Journal:  Proc Natl Acad Sci U S A       Date:  1993-02-01       Impact factor: 11.205

8.  Localization of seed protein genes on flow-sorted field bean chromosomes.

Authors:  J Macas; J Dolezel; S Lucretti; U Pich; A Meister; J Fuchs; I Schubert
Journal:  Chromosome Res       Date:  1993-07       Impact factor: 5.239

9.  Detailed studies on the application of three fluorescent antibiotics for DNA staining in flow cytometry.

Authors:  H A Crissman; A P Stevenson; D J Orlicky; R J Kissane
Journal:  Stain Technol       Date:  1978-11

10.  Flow karyotyping and sorting of Vicia faba chromosomes.

Authors:  S Lucretti; J Doležel; I Schubert; J Fuchs
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

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  13 in total

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Review 2.  Flow cytogenetics and plant genome mapping.

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Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

3.  Construction of chromosome-specific DNA libraries covering the whole genome of field bean (Vicia faba L.).

Authors:  J Macas; G Gualberti; M Nouzová; P Samec; S Lucretti; J Dolezel
Journal:  Chromosome Res       Date:  1996-11       Impact factor: 5.239

Review 4.  Chromosome-based genomics in the cereals.

Authors:  Jaroslav Dolezel; Marie Kubaláková; Etienne Paux; Jan Bartos; Catherine Feuillet
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

5.  Preparation of pea (Pisum sativum L.) chromosome and nucleus suspensions from single root tips.

Authors:  G Gualberti; J Doležel; J Macas; S Lucretti
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

6.  Flow karyotyping and sorting of mitotic chromosomes of barley (Hordeum vulgare L.).

Authors:  M A Lysák; J Cíhalíková; M Kubaláková; H Simková; G Künzel; J Dolezel
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

7.  Unlocking the barley genome by chromosomal and comparative genomics.

Authors:  Klaus F X Mayer; Mihaela Martis; Pete E Hedley; Hana Simková; Hui Liu; Jenny A Morris; Burkhard Steuernagel; Stefan Taudien; Stephan Roessner; Heidrun Gundlach; Marie Kubaláková; Pavla Suchánková; Florent Murat; Marius Felder; Thomas Nussbaumer; Andreas Graner; Jerome Salse; Takashi Endo; Hiroaki Sakai; Tsuyoshi Tanaka; Takeshi Itoh; Kazuhiro Sato; Matthias Platzer; Takashi Matsumoto; Uwe Scholz; Jaroslav Dolezel; Robbie Waugh; Nils Stein
Journal:  Plant Cell       Date:  2011-04-05       Impact factor: 11.277

8.  Chromosomal DNA content of sweet pepper determined by association of cytogenetic and cytometric tools.

Authors:  Isabella Santiago de Abreu; Carlos Roberto Carvalho; Wellington Ronildo Clarindo
Journal:  Plant Cell Rep       Date:  2008-03-18       Impact factor: 4.570

9.  Flow karyotypes and chromosomal DNA contents of genus Triticum species and rye (Secale cereale).

Authors:  Jai-Heon Lee; Youzhi Ma; Toshiyuki Wako; Lian Cheng Li; Kee-Young Kim; Seong-Whan Park; Susumu Uchiyama; Kiichi Fukui
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

Review 10.  Chromosomes in the flow to simplify genome analysis.

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Journal:  Funct Integr Genomics       Date:  2012-08-16       Impact factor: 3.410

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