Literature DB >> 12770847

Karyotype analysis of four Vicia species using in situ hybridization with repetitive sequences.

Alice Navrátilová1, Pavel Neumann, Jirí Macas.   

Abstract

Mitotic chromosomes of four Vicia species (V. sativa, V. grandiflora, V. pannonica and V. narbonensis) were subjected to in situ hybridization with probes derived from conserved plant repetitive DNA sequences (18S-25S and 5S rDNA, telomeres) and genus-specific satellite repeats (VicTR-A and VicTR-B). Numbers and positions of hybridization signals provided cytogenetic landmarks suitable for unambiguous identification of all chromosomes, and establishment of the karyotypes. The VicTR-A and -B sequences, in particular, produced highly informative banding patterns that alone were sufficient for discrimination of all chromosomes. However, these patterns were not conserved among species and thus could not be employed for identification of homologous chromosomes. This fact, together with observed variations in positions and numbers of rDNA loci, suggests considerable divergence between karyotypes of the species studied.

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Year:  2003        PMID: 12770847      PMCID: PMC4242401          DOI: 10.1093/aob/mcg099

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  18 in total

1.  Two new families of tandem repeats isolated from genus Vicia using genomic self-priming PCR.

Authors:  J Macas; D Pozárková; A Navrátilová; M Nouzová; P Neumann
Journal:  Mol Gen Genet       Date:  2000-06

2.  Molecular and cytogenetic analysis of repetitive DNA in pea (pisum sativum L.).

Authors:  P Neumann; M Nouzová; J Macas
Journal:  Genome       Date:  2001-08       Impact factor: 2.166

3.  Chromosome identification and comparative karyotypic analyses of four Pinus species.

Authors:  M. Hizume; F. Shibata; Y. Matsusaki; Z. Garajova
Journal:  Theor Appl Genet       Date:  2002-06-20       Impact factor: 5.699

4.  Preparation of pea (Pisum sativum L.) chromosome and nucleus suspensions from single root tips.

Authors:  G Gualberti; J Doležel; J Macas; S Lucretti
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

5.  A high-yield procedure for isolation of metaphase chromosomes from root tips of Vicia faba L.

Authors:  J Doležel; J Cíhalíková; S Lucretti
Journal:  Planta       Date:  1992-08       Impact factor: 4.116

6.  Molecular-cytogenetic characterization of the Vicia faba genome--heterochromatin differentiation, replication patterns and sequence localization.

Authors:  J Fuchs; S Strehl; A Brandes; D Schweizer; I Schubert
Journal:  Chromosome Res       Date:  1998-04       Impact factor: 5.239

7.  Isolation of a higher eukaryotic telomere from Arabidopsis thaliana.

Authors:  E J Richards; F M Ausubel
Journal:  Cell       Date:  1988-04-08       Impact factor: 41.582

8.  A heterochromatic satellite DNA is highly amplified in a single chromosome of Muscari (Hyacinthaceae).

Authors:  R de la Herrán; F Robles; N Cuñado; J L Santos; M Ruiz Rejón; M A Garrido-Ramos; C Ruiz Rejón
Journal:  Chromosoma       Date:  2001-07       Impact factor: 4.316

9.  Molecular cytogenetic analyses and phylogenetic studies in the Nicotiana section Tomentosae.

Authors:  K Y Lim; R Matyásek; C P Lichtenstein; A R Leitch
Journal:  Chromosoma       Date:  2000-07       Impact factor: 4.316

10.  The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation.

Authors:  S R Pearce; G Harrison; D Li; J Heslop-Harrison; A Kumar; A J Flavell
Journal:  Mol Gen Genet       Date:  1996-02-25
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  18 in total

1.  TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads.

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Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

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Authors:  Eduardo A Moscone; Rosabelle Samuel; Trude Schwarzacher; Dieter Schweizer; Andrea Pedrosa-Harand
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3.  Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species.

Authors:  Jirí Macas; Alice Navrátilová; Andrea Koblízková
Journal:  Chromosoma       Date:  2006-06-20       Impact factor: 4.316

4.  Occurrence and chromosome distribution of retroelements and NUPT sequences in Copaifera langsdorffii Desf. (Caesalpinioideae).

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5.  Isolation and characterization of a new repetitive DNA family recently amplified in the Mesoamerican gene pool of the common bean (Phaseolus vulgaris L., Fabaceae).

Authors:  Tiago Ribeiro; Karla G B dos Santos; Artur Fonsêca; Andrea Pedrosa-Harand
Journal:  Genetica       Date:  2011-11-16       Impact factor: 1.082

6.  Chromosome homeologies and high variation in heterochromatin distribution between Citrus L. and Poncirus Raf. as evidenced by comparative cytogenetic mapping.

Authors:  Sandra Mendes; Ana Paula Moraes; T Erik Mirkov; Andrea Pedrosa-Harand
Journal:  Chromosome Res       Date:  2011-04-06       Impact factor: 5.239

7.  Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement.

Authors:  Pavel Neumann; Andrea Koblízková; Alice Navrátilová; Jirí Macas
Journal:  Genetics       Date:  2006-04-03       Impact factor: 4.562

8.  Comparative mapping between Medicago sativa and Pisum sativum.

Authors:  P Kaló; A Seres; S A Taylor; J Jakab; Z Kevei; A Kereszt; G Endre; T H N Ellis; G B Kiss
Journal:  Mol Genet Genomics       Date:  2004-09-01       Impact factor: 3.291

9.  Using carrot centromeric repeats to study karyotype relationships in the genus Daucus (Apiaceae).

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Journal:  BMC Genomics       Date:  2021-07-06       Impact factor: 3.969

10.  Molecular analysis and genomic organization of major DNA satellites in banana (Musa spp.).

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Journal:  PLoS One       Date:  2013-01-23       Impact factor: 3.240

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