Literature DB >> 24166265

Karyotyping of three Pinaceae species via fluorescent in situ hybridization and computer-aided chromosome analysis.

O Lubaretz1, J Fuchs, R Ahne, A Meister, I Schubert.   

Abstract

The positions of 18/25S rRNA genes, 5S RNA genes and of Arabidopsis-type telomeric repeats were localized by fluorescent in situ hybridization (FISH) on the chromosomes of three coniferous species; Picea abies, Larix decidua and Pinus sylvestris, each with 2n=24 chromosomes. Computer-aided chromosome analysis was performed on the basis of the chromosome length, the arm length ratio and the position of the hybridization signals. This enabled the chromosomes of the Norway spruce, 4 chromosomes of the European larch and 3 of the karyotype of the Scots pine to be individually distinguished. With respect to the chromosomal positions of rDNA and 5S rDNA loci, chromosome pair I of P. sylvestris is suggested to be homoeologous to pair II of P. abies, while another chromosome pair of P. sylvestris might be homoeologous to chromosome pair III of L. decidua.

Entities:  

Year:  1996        PMID: 24166265     DOI: 10.1007/BF00223687

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  9 in total

1.  Reprobing of DNA:DNA in situ hybridization preparations.

Authors:  J S Heslop-Harrison; G E Harrison; I J Leitch
Journal:  Trends Genet       Date:  1992-11       Impact factor: 11.639

2.  Improved telomere detection using a telomere repeat probe (TTAGGG)n generated by PCR.

Authors:  J W Ijdo; R A Wells; A Baldini; S T Reeders
Journal:  Nucleic Acids Res       Date:  1991-09-11       Impact factor: 16.971

3.  Cytological and molecular relationships between Larix decidua, L. leptolepis and Larix x eurolepis: identification of species-specific Chromosoms and synchronization of mitotic cells.

Authors:  K K Nkongolo; K Klimaszewska
Journal:  Theor Appl Genet       Date:  1995-05       Impact factor: 5.699

4.  Organization of the 5S rRNA genes in the soybean Glycine max (L.) Merrill and conservation of the 5S rDNA repeat structure in higher plants.

Authors:  S G Gottlob-McHugh; M Lévesque; K MacKenzie; M Olson; O Yarosh; D A Johnson
Journal:  Genome       Date:  1990-08       Impact factor: 2.166

5.  Isolation of a higher eukaryotic telomere from Arabidopsis thaliana.

Authors:  E J Richards; F M Ausubel
Journal:  Cell       Date:  1988-04-08       Impact factor: 41.582

6.  Chromosome 'painting' in plants - a feasible technique?

Authors:  J Fuchs; A Houben; A Brandes; I Schubert
Journal:  Chromosoma       Date:  1996       Impact factor: 4.316

7.  Sister-chromatid exchanges in Picea abies--a test for genotoxicity in forest trees.

Authors:  I Schubert; R Rieger
Journal:  Mutat Res       Date:  1994-03       Impact factor: 2.433

8.  Preliminary karyotype and chromosomal localization of ribosomal DNA sites in white spruce using fluorescence in situ hybridization.

Authors:  G R Brown; V Amarasinghe; G Kiss; J E Carlson
Journal:  Genome       Date:  1993-04       Impact factor: 2.166

9.  Localization of seed protein genes on metaphase chromosomes of Vicia faba via fluorescence in situ hybridization.

Authors:  J Fuchs; I Schubert
Journal:  Chromosome Res       Date:  1995-03       Impact factor: 5.239

  9 in total
  16 in total

1.  Molecular cytogenetic analysis of Podocarpus and comparison with other gymnosperm species.

Authors:  Brian G Murray; Nikolai Friesen; J S Pat Heslop-Harrison
Journal:  Ann Bot       Date:  2002-04       Impact factor: 4.357

2.  Karyotype analysis of four Vicia species using in situ hybridization with repetitive sequences.

Authors:  Alice Navrátilová; Pavel Neumann; Jirí Macas
Journal:  Ann Bot       Date:  2003-06       Impact factor: 4.357

3.  Karyotype of Norway spruce by multicolor FISH.

Authors:  M Vischi; I Jurman; G Bianchi; M Morgante
Journal:  Theor Appl Genet       Date:  2003-06-25       Impact factor: 5.699

4.  Chromosomal localization of 5S and 18S rDNA in five species of subgenus Strobus and their implications for genome evolution of Pinus.

Authors:  Qing Cai; Daming Zhang; Zhan-Lin Liu; Xiao-Ru Wang
Journal:  Ann Bot       Date:  2006-02-15       Impact factor: 4.357

5.  Physical location of SSR regions and cytogenetic instabilities in Pinus sylvestris chromosomes revealed by ND-FISH.

Authors:  Ivo Pavia; Ana Carvalho; Luís Rocha; Maria João Gaspar; José Lima-Brito
Journal:  J Genet       Date:  2014-08       Impact factor: 1.166

6.  Two classes of 5S rDNA unit arrays of the silver fir, Abies alba Mill.: structure, localization and evolution.

Authors:  Visnja Besendorfer; Iva Krajacić-Sokol; Srećko Jelenić; Jasna Puizina; Jelena Mlinarec; Tonka Sviben; Drazena Papes
Journal:  Theor Appl Genet       Date:  2005-01-19       Impact factor: 5.699

7.  The chromosomal distribution of histone methylation marks in gymnosperms differs from that of angiosperms.

Authors:  Jörg Fuchs; Gabriele Jovtchev; Ingo Schubert
Journal:  Chromosome Res       Date:  2008-08-09       Impact factor: 5.239

8.  A full saturated linkage map of Picea abies including AFLP, SSR, ESTP, 5S rDNA and morphological markers.

Authors:  V Acheré; P Faivre-Rampant; S Jeandroz; G Besnard; T Markussen; A Aragones; M Fladung; E Ritter; J-M Favre
Journal:  Theor Appl Genet       Date:  2004-02-27       Impact factor: 5.699

9.  Marked intragenomic heterogeneity and geographical differentiation of nrDNA ITS in Larix potaninii (Pinaceae).

Authors:  Xiao-Xin Wei; Xiao-Quan Wang; De-Yuan Hong
Journal:  J Mol Evol       Date:  2003-12       Impact factor: 2.395

10.  Dancing together and separate again: gymnosperms exhibit frequent changes of fundamental 5S and 35S rRNA gene (rDNA) organisation.

Authors:  S Garcia; A Kovařík
Journal:  Heredity (Edinb)       Date:  2013-03-20       Impact factor: 3.821

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