Literature DB >> 24018421

Cohesin and the nucleolus constrain the mobility of spontaneous repair foci.

Vincent Dion1, Véronique Kalck, Andrew Seeber, Thomas Schleker, Susan M Gasser.   

Abstract

The regulation of chromatin mobility in response to DNA damage is important for homologous recombination in yeast. Anchorage reduces rates of recombination, whereas increased chromatin mobility correlates with more efficient homology search. Here we tracked the mobility and localization of spontaneous S-phase lesions bound by Rad52, and find that these foci have reduced movement, unlike enzymatically induced double-strand breaks. Moreover, spontaneous repair foci are positioned in the nuclear core, abutting the nucleolus. We show that cohesin and nucleolar integrity constrain the mobility of these foci, consistent with the notion that spontaneous, S-phase damage is preferentially repaired from the sister chromatid.

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Year:  2013        PMID: 24018421      PMCID: PMC3818071          DOI: 10.1038/embor.2013.142

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  36 in total

1.  Chromatin motion is constrained by association with nuclear compartments in human cells.

Authors:  Jonathan R Chubb; Shelagh Boyle; Paul Perry; Wendy A Bickmore
Journal:  Curr Biol       Date:  2002-03-19       Impact factor: 10.834

2.  Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins.

Authors:  Michael Lisby; Jacqueline H Barlow; Rebecca C Burgess; Rodney Rothstein
Journal:  Cell       Date:  2004-09-17       Impact factor: 41.582

3.  DNA breaks promote genomic instability by impeding proper chromosome segregation.

Authors:  Julia A Kaye; Justine A Melo; Stephanie K Cheung; Moreshwar B Vaze; James E Haber; David P Toczyski
Journal:  Curr Biol       Date:  2004-12-14       Impact factor: 10.834

4.  Double-strand breaks arising by replication through a nick are repaired by cohesin-dependent sister-chromatid exchange.

Authors:  Felipe Cortés-Ledesma; Andrés Aguilera
Journal:  EMBO Rep       Date:  2006-08-04       Impact factor: 8.807

Review 5.  DNA damage and mutagenesis by radiomimetic DNA-cleaving agents: bleomycin, neocarzinostatin and other enediynes.

Authors:  L F Povirk
Journal:  Mutat Res       Date:  1996-08-17       Impact factor: 2.433

6.  Rad52 forms DNA repair and recombination centers during S phase.

Authors:  M Lisby; R Rothstein; U H Mortensen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

7.  Chromosome fragmentation after induction of a double-strand break is an active process prevented by the RMX repair complex.

Authors:  Kirill Lobachev; Eric Vitriol; Jennifer Stemple; Michael A Resnick; Kerry Bloom
Journal:  Curr Biol       Date:  2004-12-14       Impact factor: 10.834

8.  Identification of protein complexes required for efficient sister chromatid cohesion.

Authors:  Melanie L Mayer; Isabelle Pot; Michael Chang; Hong Xu; Victoria Aneliunas; Teresa Kwok; Rick Newitt; Ruedi Aebersold; Charles Boone; Grant W Brown; Philip Hieter
Journal:  Mol Biol Cell       Date:  2004-01-23       Impact factor: 4.138

9.  Smc5-Smc6 mediate DNA double-strand-break repair by promoting sister-chromatid recombination.

Authors:  Giacomo De Piccoli; Felipe Cortes-Ledesma; Gregory Ira; Jordi Torres-Rosell; Stefan Uhle; Sarah Farmer; Ji-Young Hwang; Felix Machin; Audrey Ceschia; Alexandra McAleenan; Violeta Cordon-Preciado; Andrés Clemente-Blanco; Felip Vilella-Mitjana; Pranav Ullal; Adam Jarmuz; Beatriz Leitao; Debra Bressan; Farokh Dotiwala; Alma Papusha; Xiaolan Zhao; Kyungjae Myung; James E Haber; Andrés Aguilera; Luis Aragón
Journal:  Nat Cell Biol       Date:  2006-08-06       Impact factor: 28.824

10.  The positioning and dynamics of origins of replication in the budding yeast nucleus.

Authors:  P Heun; T Laroche; M K Raghuraman; S M Gasser
Journal:  J Cell Biol       Date:  2001-01-22       Impact factor: 10.539

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  38 in total

Review 1.  Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.

Authors:  Hannah L Klein; Giedrė Bačinskaja; Jun Che; Anais Cheblal; Rajula Elango; Anastasiya Epshtein; Devon M Fitzgerald; Belén Gómez-González; Sharik R Khan; Sandeep Kumar; Bryan A Leland; Léa Marie; Qian Mei; Judith Miné-Hattab; Alicja Piotrowska; Erica J Polleys; Christopher D Putnam; Elina A Radchenko; Anissia Ait Saada; Cynthia J Sakofsky; Eun Yong Shim; Mathew Stracy; Jun Xia; Zhenxin Yan; Yi Yin; Andrés Aguilera; Juan Lucas Argueso; Catherine H Freudenreich; Susan M Gasser; Dmitry A Gordenin; James E Haber; Grzegorz Ira; Sue Jinks-Robertson; Megan C King; Richard D Kolodner; Andrei Kuzminov; Sarah Ae Lambert; Sang Eun Lee; Kyle M Miller; Sergei M Mirkin; Thomas D Petes; Susan M Rosenberg; Rodney Rothstein; Lorraine S Symington; Pawel Zawadzki; Nayun Kim; Michael Lisby; Anna Malkova
Journal:  Microb Cell       Date:  2019-01-07

Review 2.  Poetry in motion: Increased chromosomal mobility after DNA damage.

Authors:  Michael J Smith; Rodney Rothstein
Journal:  DNA Repair (Amst)       Date:  2017-06-09

Review 3.  Mechanisms and principles of homology search during recombination.

Authors:  Jörg Renkawitz; Claudio A Lademann; Stefan Jentsch
Journal:  Nat Rev Mol Cell Biol       Date:  2014-05-14       Impact factor: 94.444

4.  Actin and Nuclear Envelope Components Influence Ectopic Recombination in the Absence of Swr1.

Authors:  Macarena Morillo-Huesca; Marina Murillo-Pineda; Marta Barrientos-Moreno; Elena Gómez-Marín; Marta Clemente-Ruiz; Félix Prado
Journal:  Genetics       Date:  2019-09-18       Impact factor: 4.562

Review 5.  SMC complexes: from DNA to chromosomes.

Authors:  Frank Uhlmann
Journal:  Nat Rev Mol Cell Biol       Date:  2016-04-14       Impact factor: 94.444

Review 6.  RecA: Regulation and Mechanism of a Molecular Search Engine.

Authors:  Jason C Bell; Stephen C Kowalczykowski
Journal:  Trends Biochem Sci       Date:  2016-05-04       Impact factor: 13.807

Review 7.  The cohesin complex prevents the end-joining of distant DNA double-strand ends in S phase: Consequences on genome stability maintenance.

Authors:  Camille Gelot; Josée Guirouilh-Barbat; Bernard S Lopez
Journal:  Nucleus       Date:  2016-06-21       Impact factor: 4.197

Review 8.  A Crowdsourced nucleus: understanding nuclear organization in terms of dynamically networked protein function.

Authors:  Ashley M Wood; Arturo G Garza-Gongora; Steven T Kosak
Journal:  Biochim Biophys Acta       Date:  2014-01-09

Review 9.  Heterogeneous fluid-like movements of chromatin and their implications to transcription.

Authors:  S S Ashwin; Kazuhiro Maeshima; Masaki Sasai
Journal:  Biophys Rev       Date:  2020-03-23

10.  Quantitative Methods to Investigate the 4D Dynamics of Heterochromatic Repair Sites in Drosophila Cells.

Authors:  Christopher P Caridi; Laetitia Delabaere; Harianto Tjong; Hannah Hopp; Devika Das; Frank Alber; Irene Chiolo
Journal:  Methods Enzymol       Date:  2018-02-26       Impact factor: 1.600

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