Literature DB >> 23995840

Regulation of the structurally dynamic N-terminal domain of progesterone receptor by protein-induced folding.

Raj Kumar1, Carmen M Moure, Shagufta H Khan, Celetta Callaway, Sandra L Grimm, Devrishi Goswami, Patrick R Griffin, Dean P Edwards.   

Abstract

The N-terminal domain (NTD) of steroid receptors harbors a transcriptional activation function (AF1) that is composed of an intrinsically disordered polypeptide. We examined the interaction of the TATA-binding protein (TBP) with the NTD of the progesterone receptor (PR) and its ability to regulate AF1 activity through coupled folding and binding. As assessed by solution phase biophysical methods, the isolated NTD of PR contains a large content of random coil, and it is capable of adopting secondary α-helical structure and more stable tertiary folding either in the presence of the natural osmolyte trimethylamine-N-oxide or through a direct interaction with TBP. Hydrogen-deuterium exchange coupled with mass spectrometry confirmed the highly dynamic intrinsically disordered property of the NTD within the context of full-length PR. Deletion mapping and point mutagenesis defined a region of the NTD (amino acids 350-428) required for structural folding in response to TBP interaction. Overexpression of TBP in cells enhanced transcriptional activity mediated by the PR NTD, and deletion mutations showed that a region (amino acids 327-428), similar to that required for TBP-induced folding, was required for functional response. TBP also increased steroid receptor co-activator 1 (SRC-1) interaction with the PR NTD and cooperated with SRC-1 to stimulate NTD-dependent transcriptional activity. These data suggest that TBP can mediate structural reorganization of the NTD to facilitate the binding of co-activators required for maximal transcriptional activation.

Entities:  

Keywords:  Hydrogen Deuterium Exchange Mass; Intrinsically Disordered Proteins; Mass Spectrometry (MS); N-terminal Transcription Activation domain AF1; Progesterone; Progesterone Receptor; Protein Folding; Steroid Hormone Receptor; TATA-binding Protein

Mesh:

Substances:

Year:  2013        PMID: 23995840      PMCID: PMC3798494          DOI: 10.1074/jbc.M113.491787

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  66 in total

1.  Mechanisms underlying the control of progesterone receptor transcriptional activity by SUMOylation.

Authors:  Hany Abdel-Hafiz; Michelle L Dudevoir; Kathryn B Horwitz
Journal:  J Biol Chem       Date:  2009-02-11       Impact factor: 5.157

2.  Conformation of the mineralocorticoid receptor N-terminal domain: evidence for induced and stable structure.

Authors:  Katharina Fischer; Sharon M Kelly; Kate Watt; Nicholas C Price; Iain J McEwan
Journal:  Mol Endocrinol       Date:  2010-08-04

Review 3.  Intrinsically disordered proteins: regulation and disease.

Authors:  M Madan Babu; Robin van der Lee; Natalia Sanchez de Groot; Jörg Gsponer
Journal:  Curr Opin Struct Biol       Date:  2011-04-20       Impact factor: 6.809

4.  Partial agonist activity of the progesterone receptor antagonist RU486 mediated by an amino-terminal domain coactivator and phosphorylation of serine400.

Authors:  Suzanne E Wardell; Ramesh Narayanan; Nancy L Weigel; Dean P Edwards
Journal:  Mol Endocrinol       Date:  2009-12-11

5.  Structure of the intact PPAR-gamma-RXR- nuclear receptor complex on DNA.

Authors:  Vikas Chandra; Pengxiang Huang; Yoshitomo Hamuro; Srilatha Raghuram; Yongjun Wang; Thomas P Burris; Fraydoon Rastinejad
Journal:  Nature       Date:  2008-11-20       Impact factor: 49.962

6.  Site-specific phosphorylation induces functionally active conformation in the intrinsically disordered N-terminal activation function (AF1) domain of the glucocorticoid receptor.

Authors:  Anna M S Garza; Shagufta H Khan; Raj Kumar
Journal:  Mol Cell Biol       Date:  2010-01       Impact factor: 4.272

Review 7.  Linking folding and binding.

Authors:  Peter E Wright; H Jane Dyson
Journal:  Curr Opin Struct Biol       Date:  2009-01-20       Impact factor: 6.809

8.  A progesterone receptor co-activator (JDP2) mediates activity through interaction with residues in the carboxyl-terminal extension of the DNA binding domain.

Authors:  Krista K Hill; Sarah C Roemer; David N M Jones; Mair E A Churchill; Dean P Edwards
Journal:  J Biol Chem       Date:  2009-06-24       Impact factor: 5.157

9.  Naturally occurring osmolyte, trehalose induces functional conformation in an intrinsically disordered activation domain of glucocorticoid receptor.

Authors:  Shagufta H Khan; John A Arnott; Raj Kumar
Journal:  PLoS One       Date:  2011-05-16       Impact factor: 3.240

10.  DNA binding alters coactivator interaction surfaces of the intact VDR-RXR complex.

Authors:  Jun Zhang; Michael J Chalmers; Keith R Stayrook; Lorri L Burris; Yongjun Wang; Scott A Busby; Bruce D Pascal; Ruben D Garcia-Ordonez; John B Bruning; Monica A Istrate; Douglas J Kojetin; Jeffrey A Dodge; Thomas P Burris; Patrick R Griffin
Journal:  Nat Struct Mol Biol       Date:  2011-04-10       Impact factor: 15.369

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  18 in total

Review 1.  Minireview: dynamic structures of nuclear hormone receptors: new promises and challenges.

Authors:  S Stoney Simons; Dean P Edwards; Raj Kumar
Journal:  Mol Endocrinol       Date:  2013-11-27

Review 2.  Allosteric pathways in nuclear receptors - Potential targets for drug design.

Authors:  Elias J Fernandez
Journal:  Pharmacol Ther       Date:  2017-10-31       Impact factor: 12.310

3.  A Metastable Contact and Structural Disorder in the Estrogen Receptor Transactivation Domain.

Authors:  Yi Peng; Shufen Cao; Janna Kiselar; Xiangzhu Xiao; Zhanwen Du; An Hsieh; Soobin Ko; Yinghua Chen; Prashansa Agrawal; Wenwei Zheng; Wuxian Shi; Wei Jiang; Lin Yang; Mark R Chance; Witold K Surewicz; Matthias Buck; Sichun Yang
Journal:  Structure       Date:  2018-12-20       Impact factor: 5.006

Review 4.  Ensemble allosteric model: energetic frustration within the intrinsically disordered glucocorticoid receptor.

Authors:  Jordan T White; Jing Li; Emily Grasso; James O Wrabl; Vincent J Hilser
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

5.  A role for site-specific phosphorylation of mouse progesterone receptor at serine 191 in vivo.

Authors:  Sandra L Grimm; Robert D Ward; Alison E Obr; Heather L Franco; Rodrigo Fernandez-Valdivia; Jung-Sun Kim; Justin M Roberts; Jae-Wook Jeong; Francesco J DeMayo; John P Lydon; Dean P Edwards; Nancy L Weigel
Journal:  Mol Endocrinol       Date:  2014-12

6.  Influence of domain interactions on conformational mobility of the progesterone receptor detected by hydrogen/deuterium exchange mass spectrometry.

Authors:  Devrishi Goswami; Celetta Callaway; Bruce D Pascal; Raj Kumar; Dean P Edwards; Patrick R Griffin
Journal:  Structure       Date:  2014-06-05       Impact factor: 5.006

7.  Peptidylprolyl Isomerase Pin1 Directly Enhances the DNA Binding Functions of Estrogen Receptor α.

Authors:  Prashant Rajbhandari; Mary Szatkowski Ozers; Natalia M Solodin; Christopher L Warren; Elaine T Alarid
Journal:  J Biol Chem       Date:  2015-04-12       Impact factor: 5.157

8.  Digested disorder, Quarterly intrinsic disorder digest (October-November-December, 2013).

Authors:  Shelly DeForte; Krishna D Reddy; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2015-03-09

9.  Identification of ELK1 interacting peptide segments in the androgen receptor.

Authors:  Claire Soave; Charles Ducker; Seongho Kim; Thomas Strahl; Rayna Rosati; Yanfang Huang; Peter E Shaw; Manohar Ratnam
Journal:  Biochem J       Date:  2022-07-29       Impact factor: 3.766

10.  NFAT5, which protects against hypertonicity, is activated by that stress via structuring of its intrinsically disordered domain.

Authors:  Raj Kumar; Jenna F DuMond; Shagufta H Khan; E Brad Thompson; Yi He; Maurice B Burg; Joan D Ferraris
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

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