Literature DB >> 28293487

Digested disorder, Quarterly intrinsic disorder digest (October-November-December, 2013).

Shelly DeForte1, Krishna D Reddy1, Vladimir N Uversky2.   

Abstract

This is the 4th issue of the Digested Disorder series that represents reader's digest of the scientific literature on intrinsically disordered proteins. The only 2 criteria for inclusion in this digest are the publication date (a paper should be published within the covered time frame) and topic (a paper should be dedicated to any aspect of protein intrinsic disorder). The current digest issue covers papers published during the fourth quarter of 2013; i.e. during the period of October, November, and December of 2013. Similar to previous issues, the papers are grouped hierarchically by topics they cover, and for each of the included paper a short description is given on its major findings.

Entities:  

Keywords:  molecular dynamic simulation, pathogenesis, post-translational modification, protein-protein interaction, viral protein

Year:  2015        PMID: 28293487      PMCID: PMC5336282          DOI: 10.4161/21690707.2014.984569

Source DB:  PubMed          Journal:  Intrinsically Disord Proteins        ISSN: 2169-0707


  86 in total

1.  SPINE-D: accurate prediction of short and long disordered regions by a single neural-network based method.

Authors:  Tuo Zhang; Eshel Faraggi; Bin Xue; A Keith Dunker; Vladimir N Uversky; Yaoqi Zhou
Journal:  J Biomol Struct Dyn       Date:  2012

2.  Evaluation of disorder predictions in CASP9.

Authors:  Bohdan Monastyrskyy; Krzysztof Fidelis; John Moult; Anna Tramontano; Andriy Kryshtafovych
Journal:  Proteins       Date:  2011-09-16

3.  Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.

Authors:  Daniel P Denning; Samir S Patel; Vladimir Uversky; Anthony L Fink; Michael Rexach
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

4.  Interplay of alpha-synuclein binding and conformational switching probed by single-molecule fluorescence.

Authors:  Allan Chris M Ferreon; Yann Gambin; Edward A Lemke; Ashok A Deniz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-17       Impact factor: 11.205

5.  Are all regions of folded proteins that undergo ligand-dependent order-disorder transitions targets for allosteric peptide mimetics?

Authors:  Aron W Fenton
Journal:  Biopolymers       Date:  2013-11       Impact factor: 2.505

6.  An N-terminal, 830 residues intrinsically disordered region of the cytoskeleton-regulatory protein supervillin contains Myosin II- and F-actin-binding sites.

Authors:  Stanislav O Fedechkin; Jacob Brockerman; Elizabeth J Luna; Michail Yu Lobanov; Oxana V Galzitskaya; Serge L Smirnov
Journal:  J Biomol Struct Dyn       Date:  2012-10-17

7.  Structural divergence is more extensive than sequence divergence for a family of intrinsically disordered proteins.

Authors:  Wade Borcherds; Stepan Kashtanov; Hongwei Wu; Gary W Daughdrill
Journal:  Proteins       Date:  2013-07-23

8.  Backbone ¹H, ¹³C and ¹⁵N resonance assignments of an intrinsically unstructured βγ-crystallin from Hahella chejuensis.

Authors:  Venkatraman Ramanujam; Sunita Patel; Atul K Srivastava; Yogendra Sharma; Kandala V R Chary
Journal:  Biomol NMR Assign       Date:  2012-07-27       Impact factor: 0.746

Review 9.  Transcriptional/epigenetic regulator CBP/p300 in tumorigenesis: structural and functional versatility in target recognition.

Authors:  Feng Wang; Christopher B Marshall; Mitsuhiko Ikura
Journal:  Cell Mol Life Sci       Date:  2013-01-11       Impact factor: 9.261

Review 10.  Protein truncation as a common denominator of human neurodegenerative foldopathies.

Authors:  Santosh Jadhav; Norbert Zilka; Michal Novak
Journal:  Mol Neurobiol       Date:  2013-03-21       Impact factor: 5.590

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  1 in total

1.  Quarterly intrinsic disorder digest (January-February-March, 2014).

Authors:  Shelly DeForte; Krishna D Reddy; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2016-02-12
  1 in total

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