Literature DB >> 23898203

Random network peristalsis in Physarum polycephalum organizes fluid flows across an individual.

Karen Alim1, Gabriel Amselem, François Peaudecerf, Michael P Brenner, Anne Pringle.   

Abstract

Individuals can function as integrated organisms only when information and resources are shared across a body. Signals and substrates are commonly moved using fluids, often channeled through a network of tubes. Peristalsis is one mechanism for fluid transport and is caused by a wave of cross-sectional contractions along a tube. We extend the concept of peristalsis from the canonical case of one tube to a random network. Transport is maximized within the network when the wavelength of the peristaltic wave is of the order of the size of the network. The slime mold Physarum polycephalum grows as a random network of tubes, and our experiments confirm peristalsis is used by the slime mold to drive internal cytoplasmic flows. Comparisons of theoretically generated contraction patterns with the patterns exhibited by individuals of P. polycephalum demonstrate that individuals maximize internal flows by adapting patterns of contraction to size, thus optimizing transport throughout an organism. This control of fluid flow may be the key to coordinating growth and behavior, including the dynamic changes in network architecture seen over time in an individual.

Entities:  

Keywords:  acellular; fungi; myxomycete

Mesh:

Year:  2013        PMID: 23898203      PMCID: PMC3746869          DOI: 10.1073/pnas.1305049110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Transformation of cytoplasmic actin. Importance for the organization of the contractile gel reticulum and the contraction--relasation cycle of cytoplasmic actomyosin.

Authors:  G Isenberg; K E Wohlfarth-Bottermann
Journal:  Cell Tissue Res       Date:  1976-10-19       Impact factor: 5.249

2.  Protoplasmic movement in slime mold plasmodia; the diffusion drag force hypothesis.

Authors:  P A STEWART; B T STEWART
Journal:  Exp Cell Res       Date:  1959-04       Impact factor: 3.905

3.  Mechanism of protoplasmic movement.

Authors:  W SEIFRIZ
Journal:  Nature       Date:  1953-06-27       Impact factor: 49.962

4.  Structure of optimal transport networks subject to a global constraint.

Authors:  Marc Durand
Journal:  Phys Rev Lett       Date:  2007-02-21       Impact factor: 9.161

5.  Peristaltic transport and mixing of cytosol through the whole body of Physarum plasmodium.

Authors:  Makoto Iima; Toshiyuki Nakagaki
Journal:  Math Med Biol       Date:  2011-07-12       Impact factor: 1.854

6.  Synchronization and signal transmission in protoplasmic strands of Physarum : The endoplasmic streaming as a pacemaker and the importance of phase deviations for the control of streaming reversal.

Authors:  U Achenbach; K E Wohlfarth-Bottermann
Journal:  Planta       Date:  1981-05       Impact factor: 4.116

7.  Rules for biologically inspired adaptive network design.

Authors:  Atsushi Tero; Seiji Takagi; Tetsu Saigusa; Kentaro Ito; Dan P Bebber; Mark D Fricker; Kenji Yumiki; Ryo Kobayashi; Toshiyuki Nakagaki
Journal:  Science       Date:  2010-01-22       Impact factor: 47.728

8.  An active membrane model for peristaltic pumping: Part I--Periodic activation waves in an infinite tube.

Authors:  E O Carew; T J Pedley
Journal:  J Biomech Eng       Date:  1997-02       Impact factor: 2.097

9.  Plasmodium of Physarum polycephalum as a synchronous contractile system.

Authors:  A Grebecki; M Cieślawska
Journal:  Cytobiologie       Date:  1978-08

10.  Patterns in the distribution of intracellular ATP concentration in relation to coordination of amoeboid cell behavior in Physarum polycephalum.

Authors:  T Ueda; Y Mori; Y Kobatake
Journal:  Exp Cell Res       Date:  1987-03       Impact factor: 3.905

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  24 in total

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Review 3.  A brief history of liquid computers.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-06-10       Impact factor: 6.237

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Authors:  M Dora; D Holcman
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5.  Oscillatory fluid flow drives scaling of contraction wave with system size.

Authors:  Jean-Daniel Julien; Karen Alim
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-03       Impact factor: 11.205

6.  Stochastic cycle selection in active flow networks.

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7.  A revised model of fluid transport optimization in Physarum polycephalum.

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Journal:  J Math Biol       Date:  2016-06-11       Impact factor: 2.259

8.  Cytoplasmic Flow and Mixing Due to Deformation of Motile Cells.

Authors:  Elena F Koslover; Caleb K Chan; Julie A Theriot
Journal:  Biophys J       Date:  2017-11-07       Impact factor: 4.033

Review 9.  Fluid flows shaping organism morphology.

Authors:  Karen Alim
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

10.  Mechanism of signal propagation in Physarum polycephalum.

Authors:  Karen Alim; Natalie Andrew; Anne Pringle; Michael P Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-02       Impact factor: 11.205

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