Literature DB >> 32598356

Resilience of three-dimensional sinusoidal networks in liver tissue.

Jens Karschau1, André Scholich2, Jonathan Wise1,3, Hernán Morales-Navarrete4, Yannis Kalaidzidis4, Marino Zerial4,5, Benjamin M Friedrich1,5.   

Abstract

Can three-dimensional, microvasculature networks still ensure blood supply if individual links fail? We address this question in the sinusoidal network, a plexus-like microvasculature network, which transports nutrient-rich blood to every hepatocyte in liver tissue, by building on recent advances in high-resolution imaging and digital reconstruction of adult mice liver tissue. We find that the topology of the three-dimensional sinusoidal network reflects its two design requirements of a space-filling network that connects all hepatocytes, while using shortest transport routes: sinusoidal networks are sub-graphs of the Delaunay graph of their set of branching points, and also contain the corresponding minimum spanning tree, both to good approximation. To overcome the spatial limitations of experimental samples and generate arbitrarily-sized networks, we developed a network generation algorithm that reproduces the statistical features of 0.3-mm-sized samples of sinusoidal networks, using multi-objective optimization for node degree and edge length distribution. Nematic order in these simulated networks implies anisotropic transport properties, characterized by an empirical linear relation between a nematic order parameter and the anisotropy of the permeability tensor. Under the assumption that all sinusoid tubes have a constant and equal flow resistance, we predict that the distribution of currents in the network is very inhomogeneous, with a small number of edges carrying a substantial part of the flow-a feature known for hierarchical networks, but unexpected for plexus-like networks. We quantify network resilience in terms of a permeability-at-risk, i.e., permeability as function of the fraction of removed edges. We find that sinusoidal networks are resilient to random removal of edges, but vulnerable to the removal of high-current edges. Our findings suggest the existence of a mechanism counteracting flow inhomogeneity to balance metabolic load on the liver.

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Year:  2020        PMID: 32598356      PMCID: PMC7351228          DOI: 10.1371/journal.pcbi.1007965

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  42 in total

1.  Mathematical modeling of the circulation in the liver lobule.

Authors:  Andrea Bonfiglio; Kritsada Leungchavaphongse; Rodolfo Repetto; Jennifer H Siggers
Journal:  J Biomech Eng       Date:  2010-11       Impact factor: 2.097

2.  Easily repairable networks: reconnecting nodes after damage.

Authors:  Robert S Farr; John L Harer; Thomas M A Fink
Journal:  Phys Rev Lett       Date:  2014-09-26       Impact factor: 9.161

3.  Regional distribution of diffusible tracers and carbonized microspheres in the left ventricle of isolated dog hearts.

Authors:  T Yipintsoi; W A Dobbs; P D Scanlon; T J Knopp; J B Bassingthwaighte
Journal:  Circ Res       Date:  1973-11       Impact factor: 17.367

4.  Robust Increase in Supply by Vessel Dilation in Globally Coupled Microvasculature.

Authors:  Felix J Meigel; Peter Cha; Michael P Brenner; Karen Alim
Journal:  Phys Rev Lett       Date:  2019-11-29       Impact factor: 9.161

5.  Integrated metabolic spatial-temporal model for the prediction of ammonia detoxification during liver damage and regeneration.

Authors:  Freimut Schliess; Stefan Hoehme; Sebastian G Henkel; Ahmed Ghallab; Dominik Driesch; Jan Böttger; Reinhard Guthke; Michael Pfaff; Jan G Hengstler; Rolf Gebhardt; Dieter Häussinger; Dirk Drasdo; Sebastian Zellmer
Journal:  Hepatology       Date:  2014-05-12       Impact factor: 17.425

6.  Pulmonary blood flow remains fractal down to the level of gas exchange.

Authors:  R W Glenny; S L Bernard; H T Robertson
Journal:  J Appl Physiol (1985)       Date:  2000-08

Review 7.  Bile formation and secretion.

Authors:  James L Boyer
Journal:  Compr Physiol       Date:  2013-07       Impact factor: 9.090

8.  Building a 3D Virtual Liver: Methods for Simulating Blood Flow and Hepatic Clearance on 3D Structures.

Authors:  Diana White; Dennis Coombe; Vahid Rezania; Jack Tuszynski
Journal:  PLoS One       Date:  2016-09-20       Impact factor: 3.240

9.  A versatile pipeline for the multi-scale digital reconstruction and quantitative analysis of 3D tissue architecture.

Authors:  Hernán Morales-Navarrete; Fabián Segovia-Miranda; Piotr Klukowski; Kirstin Meyer; Hidenori Nonaka; Giovanni Marsico; Mikhail Chernykh; Alexander Kalaidzidis; Marino Zerial; Yannis Kalaidzidis
Journal:  Elife       Date:  2015-12-27       Impact factor: 8.140

10.  Three-dimensional spatially resolved geometrical and functional models of human liver tissue reveal new aspects of NAFLD progression.

Authors:  Fabián Segovia-Miranda; Hernán Morales-Navarrete; Michael Kücken; Vincent Moser; Sarah Seifert; Urska Repnik; Fabian Rost; Mario Brosch; Alexander Hendricks; Sebastian Hinz; Christoph Röcken; Dieter Lütjohann; Yannis Kalaidzidis; Clemens Schafmayer; Lutz Brusch; Jochen Hampe; Marino Zerial
Journal:  Nat Med       Date:  2019-12-02       Impact factor: 53.440

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  3 in total

1.  Quantification of nematic cell polarity in three-dimensional tissues.

Authors:  André Scholich; Simon Syga; Hernán Morales-Navarrete; Fabián Segovia-Miranda; Hidenori Nonaka; Kirstin Meyer; Walter de Back; Lutz Brusch; Yannis Kalaidzidis; Marino Zerial; Frank Jülicher; Benjamin M Friedrich
Journal:  PLoS Comput Biol       Date:  2020-12-10       Impact factor: 4.475

2.  Automated Detection of Portal Fields and Central Veins in Whole-Slide Images of Liver Tissue.

Authors:  Daniel Budelmann; Hendrik Laue; Nick Weiss; Uta Dahmen; Lorenza A D'Alessandro; Ina Biermayer; Ursula Klingmüller; Ahmed Ghallab; Reham Hassan; Brigitte Begher-Tibbe; Jan G Hengstler; Lars Ole Schwen
Journal:  J Pathol Inform       Date:  2022-01-20

3.  Myostatin Knockout Regulates Bile Acid Metabolism by Promoting Bile Acid Synthesis in Cattle.

Authors:  Di Wu; Mingjuan Gu; Zhuying Wei; Chunling Bai; Guanghua Su; Xuefei Liu; Yuefang Zhao; Lei Yang; Guangpeng Li
Journal:  Animals (Basel)       Date:  2022-01-15       Impact factor: 2.752

  3 in total

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