Literature DB >> 20093467

Rules for biologically inspired adaptive network design.

Atsushi Tero1, Seiji Takagi, Tetsu Saigusa, Kentaro Ito, Dan P Bebber, Mark D Fricker, Kenji Yumiki, Ryo Kobayashi, Toshiyuki Nakagaki.   

Abstract

Transport networks are ubiquitous in both social and biological systems. Robust network performance involves a complex trade-off involving cost, transport efficiency, and fault tolerance. Biological networks have been honed by many cycles of evolutionary selection pressure and are likely to yield reasonable solutions to such combinatorial optimization problems. Furthermore, they develop without centralized control and may represent a readily scalable solution for growing networks in general. We show that the slime mold Physarum polycephalum forms networks with comparable efficiency, fault tolerance, and cost to those of real-world infrastructure networks--in this case, the Tokyo rail system. The core mechanisms needed for adaptive network formation can be captured in a biologically inspired mathematical model that may be useful to guide network construction in other domains.

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Year:  2010        PMID: 20093467     DOI: 10.1126/science.1177894

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  104 in total

1.  Resilience of three-dimensional sinusoidal networks in liver tissue.

Authors:  Jens Karschau; André Scholich; Jonathan Wise; Hernán Morales-Navarrete; Yannis Kalaidzidis; Marino Zerial; Benjamin M Friedrich
Journal:  PLoS Comput Biol       Date:  2020-06-29       Impact factor: 4.475

2.  Speed-accuracy trade-offs during foraging decisions in the acellular slime mould Physarum polycephalum.

Authors:  Tanya Latty; Madeleine Beekman
Journal:  Proc Biol Sci       Date:  2010-09-08       Impact factor: 5.349

3.  Brainless behavior: a myxomycete chooses a balanced diet.

Authors:  John Tyler Bonner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-23       Impact factor: 11.205

4.  Local cost minimization in ant transport networks: from small-scale data to large-scale trade-offs.

Authors:  A Bottinelli; E van Wilgenburg; D J T Sumpter; T Latty
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

5.  Phenotypic variability in unicellular organisms: from calcium signalling to social behaviour.

Authors:  David Vogel; Stamatios C Nicolis; Alfonso Perez-Escudero; Vidyanand Nanjundiah; David J T Sumpter; Audrey Dussutour
Journal:  Proc Biol Sci       Date:  2015-11-22       Impact factor: 5.349

6.  PhysarumSpreader: A New Bio-Inspired Methodology for Identifying Influential Spreaders in Complex Networks.

Authors:  Hongping Wang; Yajuan Zhang; Zili Zhang; Sankaran Mahadevan; Yong Deng
Journal:  PLoS One       Date:  2015-12-18       Impact factor: 3.240

Review 7.  Untapped potential: exploiting fungi in bioremediation of hazardous chemicals.

Authors:  Hauke Harms; Dietmar Schlosser; Lukas Y Wick
Journal:  Nat Rev Microbiol       Date:  2011-02-07       Impact factor: 60.633

8.  Taxonomies of networks from community structure.

Authors:  Jukka-Pekka Onnela; Daniel J Fenn; Stephen Reid; Mason A Porter; Peter J Mucha; Mark D Fricker; Nick S Jones
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-10

9.  Transportation network with fluctuating input/output designed by the bio-inspired Physarum algorithm.

Authors:  Shin Watanabe; Atsuko Takamatsu
Journal:  PLoS One       Date:  2014-02-26       Impact factor: 3.240

10.  The ecological basis of morphogenesis: branching patterns in swarming colonies of bacteria.

Authors:  Pan Deng; Laura de Vargas Roditi; Dave van Ditmarsch; Joao B Xavier
Journal:  New J Phys       Date:  2014-01       Impact factor: 3.729

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