Literature DB >> 30282737

Oscillatory fluid flow drives scaling of contraction wave with system size.

Jean-Daniel Julien1, Karen Alim2.   

Abstract

Flows over remarkably long distances are crucial to the functioning of many organisms, across all kingdoms of life. Coordinated flows are fundamental to power deformations, required for migration or development, or to spread resources and signals. A ubiquitous mechanism to generate flows, particularly prominent in animals and amoebas, is actomyosin cortex-driven mechanical deformations that pump the fluid enclosed by the cortex. However, it is unclear how cortex dynamics can self-organize to give rise to coordinated flows across the largely varying scales of biological systems. Here, we develop a mechanochemical model of actomyosin cortex mechanics coupled to a contraction-triggering, soluble chemical. The chemical itself is advected with the flows generated by the cortex-driven deformations of the tubular-shaped cell. The theoretical model predicts a dynamic instability giving rise to stable patterns of cortex contraction waves and oscillatory flows. Surprisingly, simulated patterns extend beyond the intrinsic length scale of the dynamic instability-scaling with system size instead. Patterns appear randomly but can be robustly generated in a growing system or by flow-generating boundary conditions. We identify oscillatory flows as the key for the scaling of contraction waves with system size. Our work shows the importance of active flows in biophysical models of patterning, not only as a regulating input or an emergent output, but also as a full part of a self-organized machinery. Contractions and fluid flows are observed in all kinds of organisms, so this concept is likely to be relevant for a broad class of systems.

Keywords:  active matter; fluid mechanics; pattern formation

Mesh:

Substances:

Year:  2018        PMID: 30282737      PMCID: PMC6196541          DOI: 10.1073/pnas.1805981115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

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3.  Rapid leukocyte migration by integrin-independent flowing and squeezing.

Authors:  Tim Lämmermann; Bernhard L Bader; Susan J Monkley; Tim Worbs; Roland Wedlich-Söldner; Karin Hirsch; Markus Keller; Reinhold Förster; David R Critchley; Reinhard Fässler; Michael Sixt
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4.  Pattern formation in active fluids.

Authors:  Justin S Bois; Frank Jülicher; Stephan W Grill
Journal:  Phys Rev Lett       Date:  2011-01-13       Impact factor: 9.161

Review 5.  Actin cortex mechanics and cellular morphogenesis.

Authors:  Guillaume Salbreux; Guillaume Charras; Ewa Paluch
Journal:  Trends Cell Biol       Date:  2012-08-04       Impact factor: 20.808

6.  Pulsatile cell-autonomous contractility drives compaction in the mouse embryo.

Authors:  Jean-Léon Maître; Ritsuya Niwayama; Hervé Turlier; François Nédélec; Takashi Hiiragi
Journal:  Nat Cell Biol       Date:  2015-06-15       Impact factor: 28.824

7.  Dictyostelium cells' cytoplasm as an active viscoplastic body.

Authors:  W Feneberg; M Westphal; E Sackmann
Journal:  Eur Biophys J       Date:  2001-08       Impact factor: 1.733

8.  Mechanics of cytogels I: oscillations in physarum.

Authors:  G F Oster; G M Odell
Journal:  Cell Motil       Date:  1984

9.  Random network peristalsis in Physarum polycephalum organizes fluid flows across an individual.

Authors:  Karen Alim; Gabriel Amselem; François Peaudecerf; Michael P Brenner; Anne Pringle
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-29       Impact factor: 11.205

10.  Coordinated waves of actomyosin flow and apical cell constriction immediately after wounding.

Authors:  Marco Antunes; Telmo Pereira; João V Cordeiro; Luis Almeida; Antonio Jacinto
Journal:  J Cell Biol       Date:  2013-07-22       Impact factor: 10.539

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Journal:  Cureus       Date:  2019-06-03

3.  Active poroelastic two-phase model for the motion of physarum microplasmodia.

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Journal:  Cureus       Date:  2020-02-10

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Journal:  Elife       Date:  2022-01-21       Impact factor: 8.140

  5 in total

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