Literature DB >> 29632264

Fluid flows shaping organism morphology.

Karen Alim1.   

Abstract

A dynamic self-organized morphology is the hallmark of network-shaped organisms like slime moulds and fungi. Organisms continuously reorganize their flexible, undifferentiated body plans to forage for food. Among these organisms the slime mould Physarum polycephalum has emerged as a model to investigate how an organism can self-organize their extensive networks and act as a coordinated whole. Cytoplasmic fluid flows flowing through the tubular networks have been identified as the key driver of morphological dynamics. Inquiring how fluid flows can shape living matter from small to large scales opens up many new avenues for research. This article is part of the theme issue 'Self-organization in cell biology'.
© 2018 The Author(s).

Entities:  

Keywords:  fluid flows; morphogenesis; transport

Mesh:

Year:  2018        PMID: 29632264      PMCID: PMC5904298          DOI: 10.1098/rstb.2017.0112

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  32 in total

1.  Protoplasmic movement in slime mold plasmodia; the diffusion drag force hypothesis.

Authors:  P A STEWART; B T STEWART
Journal:  Exp Cell Res       Date:  1959-04       Impact factor: 3.905

Review 2.  Blebs lead the way: how to migrate without lamellipodia.

Authors:  Guillaume Charras; Ewa Paluch
Journal:  Nat Rev Mol Cell Biol       Date:  2008-07-16       Impact factor: 94.444

3.  Doppler OCT imaging of cytoplasm shuttle flow in Physarum polycephalum.

Authors:  Alexander V Bykov; Alexander V Priezzhev; Janne Lauri; Risto Myllylä
Journal:  J Biophotonics       Date:  2009-09       Impact factor: 3.207

4.  Rapid leukocyte migration by integrin-independent flowing and squeezing.

Authors:  Tim Lämmermann; Bernhard L Bader; Susan J Monkley; Tim Worbs; Roland Wedlich-Söldner; Karin Hirsch; Markus Keller; Reinhold Förster; David R Critchley; Reinhard Fässler; Michael Sixt
Journal:  Nature       Date:  2008-05-01       Impact factor: 49.962

Review 5.  Turing's next steps: the mechanochemical basis of morphogenesis.

Authors:  Jonathon Howard; Stephan W Grill; Justin S Bois
Journal:  Nat Rev Mol Cell Biol       Date:  2011-06       Impact factor: 94.444

6.  Pruning to Increase Taylor Dispersion in Physarum polycephalum Networks.

Authors:  Sophie Marbach; Karen Alim; Natalie Andrew; Anne Pringle; Michael P Brenner
Journal:  Phys Rev Lett       Date:  2016-10-20       Impact factor: 9.161

7.  Cytoplasmic actin patterns in Physarum as revealed by NBD-phallacidin staining.

Authors:  W Naib-Majani; W Stockem; K Weber; J Wehland; K E Wohlfarth-Bottermann
Journal:  Cell Biol Int Rep       Date:  1983-08

8.  Random network peristalsis in Physarum polycephalum organizes fluid flows across an individual.

Authors:  Karen Alim; Gabriel Amselem; François Peaudecerf; Michael P Brenner; Anne Pringle
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-29       Impact factor: 11.205

9.  Adaptive regulation of wall shear stress to flow change in the canine carotid artery.

Authors:  A Kamiya; T Togawa
Journal:  Am J Physiol       Date:  1980-07

10.  Emergence of self-organised oscillatory domains in fungal mycelia.

Authors:  M Tlalka; D P Bebber; P R Darrah; S C Watkinson; M D Fricker
Journal:  Fungal Genet Biol       Date:  2007-03-13       Impact factor: 3.495

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  6 in total

Review 1.  A brief history of liquid computers.

Authors:  Andrew Adamatzky
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-06-10       Impact factor: 6.237

2.  Stress signalling in acellular slime moulds and its detection by conspecifics.

Authors:  L Briard; C Goujarde; C Bousquet; A Dussutour
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-05-18       Impact factor: 6.237

3.  Self-organization: the fundament of cell biology.

Authors:  Roland Wedlich-Söldner; Timo Betz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

4.  Adaptive behaviour and learning in slime moulds: the role of oscillations.

Authors:  Aurèle Boussard; Adrian Fessel; Christina Oettmeier; Léa Briard; Hans-Günther Döbereiner; Audrey Dussutour
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-01-25       Impact factor: 6.237

5.  A hydro-osmotic coarsening theory of biological cavity formation.

Authors:  Mathieu Le Verge-Serandour; Hervé Turlier
Journal:  PLoS Comput Biol       Date:  2021-09-03       Impact factor: 4.475

6.  Complex population dynamics in a spatial microbial ecosystem with Physarum polycephalum.

Authors:  Leo Epstein; Zeth Dubois; Jessica Smith; Yunha Lee; Kyle Harrington
Journal:  Biosystems       Date:  2021-07-14       Impact factor: 1.957

  6 in total

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