Literature DB >> 23869195

Biomolecular membrane protein crystallization.

Jani Reddy Bolla1, Chih-Chia Su, Edward W Yu.   

Abstract

Integral membrane proteins comprise approximately 30% of the sequenced genomes, and there is an immediate need for their high-resolution structural information. Currently, the most reliable approach to obtain these structures is x-ray crystallography. However, obtaining crystals of membrane proteins that diffract to high resolution appears to be quite challenging, and remains a major obstacle in structural determination. This brief review summarizes a variety of methodologies for use in crystallizing these membrane proteins. Hopefully, by introducing the available methods, techniques, and providing a general understanding of membrane proteins, a rational decision can be made about now to crystallize these complex materials.

Entities:  

Year:  2012        PMID: 23869195      PMCID: PMC3712538          DOI: 10.1080/14786435.2012.670734

Source DB:  PubMed          Journal:  Philos Mag (Abingdon)        ISSN: 1478-6435            Impact factor:   1.864


  43 in total

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Authors:  Joseph D Ng; José A Gavira; Juan M García-Ruíz
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

2.  Structure of the cytochrome b6f complex of oxygenic photosynthesis: tuning the cavity.

Authors:  Genji Kurisu; Huamin Zhang; Janet L Smith; William A Cramer
Journal:  Science       Date:  2003-10-02       Impact factor: 47.728

3.  Crystallization of bacteriorhodopsin from bicelle formulations at room temperature.

Authors:  Salem Faham; Gabriella L Boulting; Elizabeth A Massey; Sarah Yohannan; Dawn Yang; James U Bowie
Journal:  Protein Sci       Date:  2005-02-02       Impact factor: 6.725

Review 4.  Heterologous protein expression in the methylotrophic yeast Pichia pastoris.

Authors:  J L Cereghino; J M Cregg
Journal:  FEMS Microbiol Rev       Date:  2000-01       Impact factor: 16.408

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.

Authors:  S Iwata; C Ostermeier; B Ludwig; H Michel
Journal:  Nature       Date:  1995-08-24       Impact factor: 49.962

7.  Structure of acid-sensing ion channel 1 at 1.9 A resolution and low pH.

Authors:  Jayasankar Jasti; Hiroyasu Furukawa; Eric B Gonzales; Eric Gouaux
Journal:  Nature       Date:  2007-09-20       Impact factor: 49.962

8.  A lipidic-sponge phase screen for membrane protein crystallization.

Authors:  Annemarie B Wöhri; Linda C Johansson; Pia Wadsten-Hindrichsen; Weixiao Y Wahlgren; Gerhard Fischer; Rob Horsefield; Gergely Katona; Maria Nyblom; Fredrik Oberg; Gillian Young; Richard J Cogdell; Niall J Fraser; Sven Engström; Richard Neutze
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

9.  The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist.

Authors:  Veli-Pekka Jaakola; Mark T Griffith; Michael A Hanson; Vadim Cherezov; Ellen Y T Chien; J Robert Lane; Adriaan P Ijzerman; Raymond C Stevens
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

Review 10.  Recombinant protein expression in Pichia pastoris.

Authors:  J M Cregg; J L Cereghino; J Shi; D R Higgins
Journal:  Mol Biotechnol       Date:  2000-09       Impact factor: 2.860

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  9 in total

Review 1.  Membrane proteins, detergents and crystals: what is the state of the art?

Authors:  Patrick J Loll
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-28       Impact factor: 1.056

2.  Detergent screening of the human voltage-gated proton channel using fluorescence-detection size-exclusion chromatography.

Authors:  Amruta Agharkar; Jennifer Rzadkowolski; Mandy McBroom; Eric B Gonzales
Journal:  Protein Sci       Date:  2014-06-14       Impact factor: 6.725

3.  Comparison of NMR and crystal structures of membrane proteins and computational refinement to improve model quality.

Authors:  Julia Koehler Leman; Andrew R D'Avino; Yash Bhatnagar; Jeffrey J Gray
Journal:  Proteins       Date:  2017-11-08

Review 4.  Computational modeling of membrane proteins.

Authors:  Julia Koehler Leman; Martin B Ulmschneider; Jeffrey J Gray
Journal:  Proteins       Date:  2014-11-19

Review 5.  Crystallization of membrane proteins by vapor diffusion.

Authors:  Jared A Delmar; Jani Reddy Bolla; Chih-Chia Su; Edward W Yu
Journal:  Methods Enzymol       Date:  2015-03-24       Impact factor: 1.600

Review 6.  Plant High-Affinity Potassium (HKT) Transporters involved in salinity tolerance: structural insights to probe differences in ion selectivity.

Authors:  Shane Waters; Matthew Gilliham; Maria Hrmova
Journal:  Int J Mol Sci       Date:  2013-04-09       Impact factor: 5.923

7.  Repeat-swap homology modeling of secondary active transporters: updated protocol and prediction of elevator-type mechanisms.

Authors:  Ariela Vergara-Jaque; Cristina Fenollar-Ferrer; Desirée Kaufmann; Lucy R Forrest
Journal:  Front Pharmacol       Date:  2015-09-04       Impact factor: 5.810

8.  Editorial: In silico Modeling of Brain Receptors for Antidepressants, Psychostimulants, and Other CNS-Active Drugs.

Authors:  Christopher K Surratt; Jeffry D Madura
Journal:  Front Pharmacol       Date:  2016-01-08       Impact factor: 5.810

9.  Deep phylogeny of cancer drivers and compensatory mutations.

Authors:  Nash D Rochman; Yuri I Wolf; Eugene V Koonin
Journal:  Commun Biol       Date:  2020-10-02
  9 in total

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