Literature DB >> 12718933

Protein crystallization by capillary counterdiffusion for applied crystallographic structure determination.

Joseph D Ng1, José A Gavira, Juan M García-Ruíz.   

Abstract

Counterdiffusion crystallization in capillary is a very simple, cost-effective, and practical procedure for obtaining protein crystals suitable for X-ray data analysis. Its principles have been derived using well-known concepts coupling the ideas of precipitation and diffusion mass transport in a restricted geometry. The counterdiffusion process has been used to simultaneously screen for optimal conditions for protein crystal growth, incorporate strong anomalous scattering atoms, and mix in cryogenic solutions in a single capillary tube. The crystals obtained in the capillary have been used in situ for X-ray analysis. The implementation of this technique linked to the advancement of current crystallography software leads to a powerful structure determination method consolidating crystal growth, X-ray data collection, and ab initio phase determination into one without crystal manipulation. We review the historical progress of counterdiffusion crystallization, its application to X-ray crystallography, and ongoing tool development for high-throughput protein structure determination.

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Year:  2003        PMID: 12718933     DOI: 10.1016/s1047-8477(03)00052-2

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  49 in total

Review 1.  Protein crystallization in the structural genomics era.

Authors:  Alexander McPherson
Journal:  J Struct Funct Genomics       Date:  2004

Review 2.  The role of mass transport in protein crystallization.

Authors:  Juan Manuel García-Ruiz; Fermín Otálora; Alfonso García-Caballero
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-01-26       Impact factor: 1.056

3.  Protein production and crystallization at SECSG -- an overview.

Authors:  Bi-Cheng Wang; Michael W W Adams; Harry Dailey; Larry DeLucas; Ming Luo; John Rose; Robert Bunzel; Tamara Dailey; Jeff Habel; Peter Horanyi; Francis E Jenney; Irina Kataeva; Han-Seung Lee; Songlin Li; Ting Li; Dawei Lin; Zhi-Jie Liu; Chi-Hao Luan; Michael Mayer; Lisa Nagy; M Gary Newton; Joseph Ng; Farris L Poole; Ashit Shah; Claudia Shah; Frank J Sugar; Hao Xu
Journal:  J Struct Funct Genomics       Date:  2005

Review 4.  Using nanoliter plugs in microfluidics to facilitate and understand protein crystallization.

Authors:  Bo Zheng; Cory J Gerdts; Rustem F Ismagilov
Journal:  Curr Opin Struct Biol       Date:  2005-10       Impact factor: 6.809

5.  Using microfluidics to observe the effect of mixing on nucleation of protein crystals.

Authors:  Delai L Chen; Cory J Gerdts; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2005-07-13       Impact factor: 15.419

6.  Crystallization of ornithine acetyltransferase from yeast by counter-diffusion and preliminary X-ray study.

Authors:  Dominique Maes; Marjolaine Crabeel; Cécile Van de Weerdt; Joseph Martial; Eveline Peeters; Daniël Charlier; Klaas Decanniere; Celine Vanhee; Lode Wyns; Ingrid Zegers
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-11-30

7.  Crystallization and preliminary crystallographic studies of an active-site mutant hydantoin racemase from Sinorhizobium meliloti CECT4114.

Authors:  Sergio Martínez-Rodríguez; Luis Antonio González-Ramírez; Josefa María Clemente-Jiménez; Felipe Rodríguez-Vico; Francisco Javier Las Heras-Vázquez; Jose Antonio Gavira; Juan Ma García-Ruiz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-12-20

8.  Characterization of crystals of the Hjc resolvase from Archaeoglobus fulgidus grown in gel by counter-diffusion.

Authors:  Christian Biertümpfel; Jérôme Basquin; Rainer P Birkenbihl; Dietrich Suck; Claude Sauter
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-06-15

9.  Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.

Authors:  Liang Li; Wenbin Du; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

10.  Optimizing Associative Experimental Design for Protein Crystallization Screening.

Authors:  Imren Dinc; Marc L Pusey; Ramazan S Aygun
Journal:  IEEE Trans Nanobioscience       Date:  2016-02-29       Impact factor: 2.935

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