Literature DB >> 23789944

A general method for fluorescent labeling of the N-termini of lanthipeptides and its application to visualize their cellular localization.

Noah A Bindman1, Wilfred A van der Donk.   

Abstract

Labeling of natural products with biophysical probes has greatly contributed to investigations of their modes of action and has provided tools for visualization of their targets. A general challenge is the availability of a suitable functional group for chemoselective modification. We demonstrate here that an N-terminal ketone is readily introduced into various lanthipeptides by the generation of a cryptic N-terminal dehydro amino acid by the cognate biosynthetic enzymes. Spontaneous hydrolysis of the N-terminal enamines results in α-ketoamides that site-specifically react with an aminooxy-derivatized alkyne or fluorophore. The methodology was successfully applied to prochlorosins 1.7 and 2.8, as well as the lantibiotics lacticin 481, haloduracin α, and haloduracin β. The fluorescently modified lantibiotics were added to bacteria, and their cellular localization was visualized by confocal fluorescence microscopy. Lacticin 481 and haloduracin α localized predominantly at sites of new and old cell division as well as in punctate patterns along the long axis of rod-shaped bacilli, similar to the localization of lipid II. On the other hand, haloduracin β was localized nonspecifically in the absence of haloduracin α, but formed specific patterns when coadministered with haloduracin α. Using two-color labeling, colocalization of both components of the two-component lantibiotic haloduracin was demonstrated. These data with living cells supports a model in which the α component recognizes lipid II and then recruits the β-component.

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Year:  2013        PMID: 23789944      PMCID: PMC3775354          DOI: 10.1021/ja4010706

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  72 in total

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Authors:  G Dirix; P Monsieurs; K Marchal; J Vanderleyden; J Michiels
Journal:  Microbiology       Date:  2004-05       Impact factor: 2.777

2.  An alternative bactericidal mechanism of action for lantibiotic peptides that target lipid II.

Authors:  Hester E Hasper; Naomi E Kramer; James L Smith; J D Hillman; Cherian Zachariah; Oscar P Kuipers; Ben de Kruijff; Eefjan Breukink
Journal:  Science       Date:  2006-09-15       Impact factor: 47.728

3.  Catalytic promiscuity in the biosynthesis of cyclic peptide secondary metabolites in planktonic marine cyanobacteria.

Authors:  Bo Li; Daniel Sher; Libusha Kelly; Yanxiang Shi; Katherine Huang; Patrick J Knerr; Ike Joewono; Doug Rusch; Sallie W Chisholm; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

4.  Congeneric lantibiotics from ribosomal in vivo peptide synthesis with noncanonical amino acids.

Authors:  Florian Oldach; Rashed Al Toma; Anja Kuthning; Tânia Caetano; Sónia Mendo; Nediljko Budisa; Roderich D Süssmuth
Journal:  Angew Chem Int Ed Engl       Date:  2011-11-30       Impact factor: 15.336

5.  Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights.

Authors:  Yuki Goto; Bo Li; Jan Claesen; Yanxiang Shi; Mervyn J Bibb; Wilfred A van der Donk
Journal:  PLoS Biol       Date:  2010-03-23       Impact factor: 8.029

6.  Evaluation of essential and variable residues of nukacin ISK-1 by NNK scanning.

Authors:  Mohammad R Islam; K Shioya; J Nagao; M Nishie; H Jikuya; T Zendo; J Nakayama; K Sonomoto
Journal:  Mol Microbiol       Date:  2009-05-08       Impact factor: 3.501

7.  An engineered lantibiotic synthetase that does not require a leader peptide on its substrate.

Authors:  Trent J Oman; Patrick J Knerr; Noah A Bindman; Juan E Velásquez; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2012-04-11       Impact factor: 15.419

8.  Production of lantipeptides in Escherichia coli.

Authors:  Yanxiang Shi; Xiao Yang; Neha Garg; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2010-11-29       Impact factor: 15.419

9.  Nine post-translational modifications during the biosynthesis of cinnamycin.

Authors:  Ayşe Ökesli; Lisa E Cooper; Emily J Fogle; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2011-08-10       Impact factor: 15.419

10.  In vitro mutasynthesis of lantibiotic analogues containing nonproteinogenic amino acids.

Authors:  Matthew R Levengood; Patrick J Knerr; Trent J Oman; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

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  15 in total

Review 1.  Lights, Camera, Action! Antimicrobial Peptide Mechanisms Imaged in Space and Time.

Authors:  Heejun Choi; Nambirajan Rangarajan; James C Weisshaar
Journal:  Trends Microbiol       Date:  2015-12-13       Impact factor: 17.079

2.  Visualizing attack of Escherichia coli by the antimicrobial peptide human defensin 5.

Authors:  Haritha R Chileveru; Shion A Lim; Phoom Chairatana; Andrew J Wommack; I-Ling Chiang; Elizabeth M Nolan
Journal:  Biochemistry       Date:  2015-03-02       Impact factor: 3.162

3.  Application of meta- and para-Phenylenediamine as Enhanced Oxime Ligation Catalysts for Protein Labeling, PEGylation, Immobilization, and Release.

Authors:  Mohammad M Mahmoodi; Mohammad Rashidian; Yi Zhang; Mark D Distefano
Journal:  Curr Protoc Protein Sci       Date:  2015-02-02

4.  Facile Removal of Leader Peptides from Lanthipeptides by Incorporation of a Hydroxy Acid.

Authors:  Noah A Bindman; Silvia C Bobeica; Wenshe R Liu; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2015-06-01       Impact factor: 15.419

Review 5.  Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.

Authors:  Lindsay M Repka; Jonathan R Chekan; Satish K Nair; Wilfred A van der Donk
Journal:  Chem Rev       Date:  2017-01-30       Impact factor: 60.622

6.  Recombinant thiopeptides containing noncanonical amino acids.

Authors:  Xiaozhou Luo; Claudio Zambaldo; Tao Liu; Yuhan Zhang; Weimin Xuan; Chen Wang; Sean A Reed; Peng-Yu Yang; Rongsheng E Wang; Tsotne Javahishvili; Peter G Schultz; Travis S Young
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-14       Impact factor: 11.205

7.  Plantazolicin is an ultra-narrow spectrum antibiotic that targets the Bacillus anthracis membrane.

Authors:  Katie J Molohon; Patricia M Blair; Seongjin Park; James R Doroghazi; Tucker Maxson; Jeremy R Hershfield; Kristen M Flatt; Nathan E Schroeder; Taekjip Ha; Douglas A Mitchell
Journal:  ACS Infect Dis       Date:  2015-12-23       Impact factor: 5.084

8.  CylA is a sequence-specific protease involved in toxin biosynthesis.

Authors:  Weixin Tang; Silvia C Bobeica; Li Wang; Wilfred A van der Donk
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-27       Impact factor: 3.346

9.  De novo biosynthesis of terminal alkyne-labeled natural products.

Authors:  Xuejun Zhu; Joyce Liu; Wenjun Zhang
Journal:  Nat Chem Biol       Date:  2014-12-22       Impact factor: 15.040

10.  Structural Characterization and Bioactivity Analysis of the Two-Component Lantibiotic Flv System from a Ruminant Bacterium.

Authors:  Xiling Zhao; Wilfred A van der Donk
Journal:  Cell Chem Biol       Date:  2016-01-28       Impact factor: 8.116

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