Literature DB >> 26006047

Facile Removal of Leader Peptides from Lanthipeptides by Incorporation of a Hydroxy Acid.

Noah A Bindman1, Silvia C Bobeica1, Wenshe R Liu, Wilfred A van der Donk1.   

Abstract

The biosynthesis of ribosomally synthesized and post-translationally modified peptide (RiPP) natural products typically involves a precursor peptide which contains a leader peptide that is important for the modification process, and that is removed in the final step by a protease. Genome mining efforts for new RiPPs are often hampered by the lack of a general method to remove the leader peptides. We describe here the incorporation of hydroxy acids into the precursor peptides in E. coli which results in connection of the leader peptide via an ester linkage that is readily cleaved by simple hydrolysis. We demonstrate the method for two lantibiotics, lacticin 481 and nukacin ISK-1.

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Year:  2015        PMID: 26006047      PMCID: PMC4505723          DOI: 10.1021/jacs.5b04681

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  Requirements of the engineered leader peptide of nisin for inducing modification, export, and cleavage.

Authors:  Annechien Plat; Leon D Kluskens; Anneke Kuipers; Rick Rink; Gert N Moll
Journal:  Appl Environ Microbiol       Date:  2010-11-19       Impact factor: 4.792

2.  Heterologous expression, biosynthesis, and mutagenesis of type II lantibiotics from Bacillus licheniformis in Escherichia coli.

Authors:  Tânia Caetano; Joanna M Krawczyk; Eva Mösker; Roderich D Süssmuth; Sónia Mendo
Journal:  Chem Biol       Date:  2011-01-28

3.  To protect peptide pharmaceuticals against peptidases.

Authors:  R Rink; A Arkema-Meter; I Baudoin; E Post; A Kuipers; S A Nelemans; M Haas Jimoh Akanbi; G N Moll
Journal:  J Pharmacol Toxicol Methods       Date:  2010-02-20       Impact factor: 1.950

Review 4.  Genome mining for ribosomally synthesized natural products.

Authors:  Juan E Velásquez; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2010-11-20       Impact factor: 8.822

5.  Photochemical cleavage of leader peptides.

Authors:  Noah Bindman; Remco Merkx; Robert Koehler; Nicholas Herrman; Wilfred A van der Donk
Journal:  Chem Commun (Camb)       Date:  2010-11-02       Impact factor: 6.222

6.  Dissection of the bridging pattern of bovicin HJ50, a lantibiotic containing a characteristic disulfide bridge.

Authors:  Yuheng Lin; Kunling Teng; Liandong Huan; Jin Zhong
Journal:  Microbiol Res       Date:  2010-07-13       Impact factor: 5.415

7.  Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights.

Authors:  Yuki Goto; Bo Li; Jan Claesen; Yanxiang Shi; Mervyn J Bibb; Wilfred A van der Donk
Journal:  PLoS Biol       Date:  2010-03-23       Impact factor: 8.029

8.  Production of lantipeptides in Escherichia coli.

Authors:  Yanxiang Shi; Xiao Yang; Neha Garg; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2010-11-29       Impact factor: 15.419

9.  Nine post-translational modifications during the biosynthesis of cinnamycin.

Authors:  Ayşe Ökesli; Lisa E Cooper; Emily J Fogle; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2011-08-10       Impact factor: 15.419

10.  Genome mining for ribosomally synthesized and post-translationally modified peptides (RiPPs) in anaerobic bacteria.

Authors:  Anne-Catrin Letzel; Sacha J Pidot; Christian Hertweck
Journal:  BMC Genomics       Date:  2014-11-18       Impact factor: 3.969

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  16 in total

1.  Recombinant Macrocyclic Lanthipeptides Incorporating Non-Canonical Amino Acids.

Authors:  Claudio Zambaldo; Xiaozhou Luo; Angad P Mehta; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2017-08-15       Impact factor: 15.419

2.  Recombinant thiopeptides containing noncanonical amino acids.

Authors:  Xiaozhou Luo; Claudio Zambaldo; Tao Liu; Yuhan Zhang; Weimin Xuan; Chen Wang; Sean A Reed; Peng-Yu Yang; Rongsheng E Wang; Tsotne Javahishvili; Peter G Schultz; Travis S Young
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3.  Incorporation of Nonproteinogenic Amino Acids in Class I and II Lantibiotics.

Authors:  Nidhi Kakkar; Jessica G Perez; Wenshe R Liu; Michael C Jewett; Wilfred A van der Donk
Journal:  ACS Chem Biol       Date:  2018-02-21       Impact factor: 5.100

Review 4.  Nisin Variants Generated by Protein Engineering and Their Properties.

Authors:  Yue Zheng; Yuhui Du; Zekai Qiu; Ziming Liu; Jianjun Qiao; Yanni Li; Qinggele Caiyin
Journal:  Bioengineering (Basel)       Date:  2022-06-10

5.  Substrate Recognition by the Class II Lanthipeptide Synthetase HalM2.

Authors:  Imran R Rahman; Jeella Z Acedo; Xiaoran Roger Liu; Lingyang Zhu; Justine Arrington; Michael L Gross; Wilfred A van der Donk
Journal:  ACS Chem Biol       Date:  2020-04-28       Impact factor: 5.100

6.  Rapid Screening of Lanthipeptide Analogs via In-Colony Removal of Leader Peptides in Escherichia coli.

Authors:  Tong Si; Qiqi Tian; Yuhao Min; Linzixuan Zhang; Jonathan V Sweedler; Wilfred A van der Donk; Huimin Zhao
Journal:  J Am Chem Soc       Date:  2018-09-12       Impact factor: 15.419

Review 7.  Playing with the Molecules of Life.

Authors:  Douglas D Young; Peter G Schultz
Journal:  ACS Chem Biol       Date:  2018-03-02       Impact factor: 5.100

Review 8.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

9.  Probing the role of the backbone carbonyl interaction with the CuA center in azurin by replacing the peptide bond with an ester linkage.

Authors:  Kevin M Clark; Shiliang Tian; Wilfred A van der Donk; Yi Lu
Journal:  Chem Commun (Camb)       Date:  2016-12-20       Impact factor: 6.222

Review 10.  Biocatalytic synthesis of peptidic natural products and related analogues.

Authors:  Dake Liu; Garret M Rubin; Dipesh Dhakal; Manyun Chen; Yousong Ding
Journal:  iScience       Date:  2021-05-04
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