Literature DB >> 23751950

Noise Effects in Various Quantitative Susceptibility Mapping Methods.

Shuai Wang, Tian Liu, Weiwei Chen, Pascal Spincemaille, Cynthia Wisnieff, A John Tsiouris, Wenzhen Zhu, Chu Pan, Lingyun Zhao, Yi Wang.   

Abstract

Various regularization methods have been proposed for single-orientation quantitative susceptibility mapping (QSM), which is an ill-posed magnetic field to susceptibility source inverse problem. Noise amplification, a major issue in inverse problems, manifests as streaking artifacts and quantification errors in QSM and has not been comparatively evaluated in these algorithms. In this paper, various QSM methods were systematically categorized for noise analysis. Six representative QSM methods were selected from four categories: two non-Bayesian methods with alteration or approximation of the dipole kernel to overcome the ill conditioning; four Bayesian methods using a general mathematical prior or a specific physical structure prior to select a unique solution, and using a data fidelity term with or without noise weighting. The effects of noise in these QSM methods were evaluated by reconstruction errors in simulation and image quality in 50 consecutive human subjects. Bayesian QSM methods with noise weighting consistently reduced root mean squared errors in numerical simulations and increased image quality scores in the human brain images, when compared to non-Bayesian methods and to corresponding Bayesian methods without noise weighting (p ≤ 0.001). In summary, noise effects in QSM can be reduced using Bayesian methods with proper noise weighting.

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Year:  2013        PMID: 23751950      PMCID: PMC5553691          DOI: 10.1109/TBME.2013.2266795

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  38 in total

1.  Cerebral microbleeds: burden assessment by using quantitative susceptibility mapping.

Authors:  Tian Liu; Krishna Surapaneni; Min Lou; Liuquan Cheng; Pascal Spincemaille; Yi Wang
Journal:  Radiology       Date:  2011-11-04       Impact factor: 11.105

2.  Quantitative MR susceptibility mapping using piece-wise constant regularized inversion of the magnetic field.

Authors:  Ludovic de Rochefort; Ryan Brown; Martin R Prince; Yi Wang
Journal:  Magn Reson Med       Date:  2008-10       Impact factor: 4.668

3.  Quantitative susceptibility map reconstruction from MR phase data using bayesian regularization: validation and application to brain imaging.

Authors:  Ludovic de Rochefort; Tian Liu; Bryan Kressler; Jing Liu; Pascal Spincemaille; Vincent Lebon; Jianlin Wu; Yi Wang
Journal:  Magn Reson Med       Date:  2010-01       Impact factor: 4.668

4.  Whole brain susceptibility mapping using compressed sensing.

Authors:  Bing Wu; Wei Li; Arnaud Guidon; Chunlei Liu
Journal:  Magn Reson Med       Date:  2011-06-10       Impact factor: 4.668

5.  Susceptibility mapping as a means to visualize veins and quantify oxygen saturation.

Authors:  E M Haacke; J Tang; J Neelavalli; Y C N Cheng
Journal:  J Magn Reson Imaging       Date:  2010-09       Impact factor: 4.813

6.  A novel background field removal method for MRI using projection onto dipole fields (PDF).

Authors:  Tian Liu; Ildar Khalidov; Ludovic de Rochefort; Pascal Spincemaille; Jing Liu; A John Tsiouris; Yi Wang
Journal:  NMR Biomed       Date:  2011-03-08       Impact factor: 4.044

Review 7.  Iron, brain ageing and neurodegenerative disorders.

Authors:  Luigi Zecca; Moussa B H Youdim; Peter Riederer; James R Connor; Robert R Crichton
Journal:  Nat Rev Neurosci       Date:  2004-11       Impact factor: 34.870

8.  Differentiation of calcification from chronic hemorrhage with corrected gradient echo phase imaging.

Authors:  R K Gupta; S B Rao; R Jain; L Pal; R Kumar; S K Venkatesh; R K Rathore
Journal:  J Comput Assist Tomogr       Date:  2001 Sep-Oct       Impact factor: 1.826

9.  Doppler perfusion index: an interobserver and intraobserver reproducibility study.

Authors:  K Oppo; E Leen; W J Angerson; T G Cooke; C S McArdle
Journal:  Radiology       Date:  1998-08       Impact factor: 11.105

10.  Magnetic susceptibility mapping of brain tissue in vivo using MRI phase data.

Authors:  Karin Shmueli; Jacco A de Zwart; Peter van Gelderen; Tie-Qiang Li; Stephen J Dodd; Jeff H Duyn
Journal:  Magn Reson Med       Date:  2009-12       Impact factor: 4.668

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  14 in total

1.  Background field removal using a region adaptive kernel for quantitative susceptibility mapping of human brain.

Authors:  Jinsheng Fang; Lijun Bao; Xu Li; Peter C M van Zijl; Zhong Chen
Journal:  J Magn Reson       Date:  2017-05-10       Impact factor: 2.229

2.  Enhancing k-space quantitative susceptibility mapping by enforcing consistency on the cone data (CCD) with structural priors.

Authors:  Yan Wen; Yi Wang; Tian Liu
Journal:  Magn Reson Med       Date:  2015-03-07       Impact factor: 4.668

3.  Susceptibility difference weighted imaging in vertical-field MRI.

Authors:  Ryota Sato; Toru Shirai; Yo Taniguchi; Takenori Murase; Yoshitaka Bito; Yoshihisa Soutome; Hisaaki Ochi
Journal:  Radiol Phys Technol       Date:  2018-04-26

4.  Reproducibility of quantitative susceptibility mapping in the brain at two field strengths from two vendors.

Authors:  Kofi Deh; Thanh D Nguyen; Sarah Eskreis-Winkler; Martin R Prince; Pascal Spincemaille; Susan Gauthier; Ilhami Kovanlikaya; Yan Zhang; Yi Wang
Journal:  J Magn Reson Imaging       Date:  2015-05-09       Impact factor: 4.813

5.  Data-Driven Quantitative Susceptibility Mapping Using Loss Adaptive Dipole Inversion (LADI).

Authors:  Srikant Kamesh Iyer; Brianna F Moon; Nicholas Josselyn; Kosha Ruparel; David Roalf; Jae W Song; Samantha Guiry; Jeffrey B Ware; Robert M Kurtz; Sanjeev Chawla; S Ali Nabavizadeh; Walter R Witschey
Journal:  J Magn Reson Imaging       Date:  2020-03-04       Impact factor: 4.813

Review 6.  An illustrated comparison of processing methods for phase MRI and QSM: removal of background field contributions from sources outside the region of interest.

Authors:  Ferdinand Schweser; Simon Daniel Robinson; Ludovic de Rochefort; Wei Li; Kristian Bredies
Journal:  NMR Biomed       Date:  2016-10-07       Impact factor: 4.044

7.  Quantitative susceptibility mapping (QSM) with an extended physical model for MRI frequency contrast in the brain: a proof-of-concept of quantitative susceptibility and residual (QUASAR) mapping.

Authors:  Ferdinand Schweser; Robert Zivadinov
Journal:  NMR Biomed       Date:  2018-09-24       Impact factor: 4.044

8.  Quantitative susceptibility mapping: Report from the 2016 reconstruction challenge.

Authors:  Christian Langkammer; Ferdinand Schweser; Karin Shmueli; Christian Kames; Xu Li; Li Guo; Carlos Milovic; Jinsuh Kim; Hongjiang Wei; Kristian Bredies; Sagar Buch; Yihao Guo; Zhe Liu; Jakob Meineke; Alexander Rauscher; José P Marques; Berkin Bilgic
Journal:  Magn Reson Med       Date:  2017-07-31       Impact factor: 4.668

9.  The 2016 QSM Challenge: Lessons learned and considerations for a future challenge design.

Authors:  Carlos Milovic; Cristian Tejos; Julio Acosta-Cabronero; Pinar Senay Özbay; Ferdinand Schwesser; Jose Pedro Marques; Pablo Irarrazaval; Berkin Bilgic; Christian Langkammer
Journal:  Magn Reson Med       Date:  2020-02-21       Impact factor: 4.668

10.  In vivo quantitative susceptibility mapping (QSM) in Alzheimer's disease.

Authors:  Julio Acosta-Cabronero; Guy B Williams; Arturo Cardenas-Blanco; Robert J Arnold; Victoria Lupson; Peter J Nestor
Journal:  PLoS One       Date:  2013-11-21       Impact factor: 3.240

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