Literature DB >> 23739794

Prostate histopathology: learning tissue component histograms for cancer detection and classification.

Lena Gorelick, Olga Veksler, Mena Gaed, Jose A Gomez, Madeleine Moussa, Glenn Bauman, Aaron Fenster, Aaron D Ward.   

Abstract

Radical prostatectomy is performed on approximately 40% of men with organ-confined prostate cancer. Pathologic information obtained from the prostatectomy specimen provides important prognostic information and guides recommendations for adjuvant treatment. The current pathology protocol in most centers involves primarily qualitative assessment. In this paper, we describe and evaluate our system for automatic prostate cancer detection and grading on hematoxylin & eosin-stained tissue images. Our approach is intended to address the dual challenges of large data size and the need for high-level tissue information about the locations and grades of tumors. Our system uses two stages of AdaBoost-based classification. The first provides high-level tissue component labeling of a superpixel image partitioning. The second uses the tissue component labeling to provide a classification of cancer versus noncancer, and low-grade versus high-grade cancer. We evaluated our system using 991 sub-images extracted from digital pathology images of 50 whole-mount tissue sections from 15 prostatectomy patients. We measured accuracies of 90% and 85% for the cancer versus noncancer and high-grade versus low-grade classification tasks, respectively. This system represents a first step toward automated cancer quantification on prostate digital histopathology imaging, which could pave the way for more accurately informed postprostatectomy patient care.

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Year:  2013        PMID: 23739794     DOI: 10.1109/TMI.2013.2265334

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  19 in total

1.  Automatic cancer detection on digital histopathology images of mid-gland radical prostatectomy specimens.

Authors:  Wenchao Han; Carol Johnson; Andrew Warner; Mena Gaed; Jose A Gomez; Madeleine Moussa; Joseph Chin; Stephen Pautler; Glenn Bauman; Aaron D Ward
Journal:  J Med Imaging (Bellingham)       Date:  2020-07-16

2.  A Multi-scale U-Net for Semantic Segmentation of Histological Images from Radical Prostatectomies.

Authors:  Jiayun Li; Karthik V Sarma; King Chung Ho; Arkadiusz Gertych; Beatrice S Knudsen; Corey W Arnold
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

3.  AIIMDs: An Integrated Framework of Automatic Idiopathic Inflammatory Myopathy Diagnosis for Muscle.

Authors:  Manish Sapkota; Fujun Liu; Yuanpu Xie; Hai Su; Fuyong Xing; Lin Yang
Journal:  IEEE J Biomed Health Inform       Date:  2017-04-13       Impact factor: 5.772

4.  Automatic quantification of morphological features for hepatic trabeculae analysis in stained liver specimens.

Authors:  Masahiro Ishikawa; Yuri Murakami; Sercan Taha Ahi; Masahiro Yamaguchi; Naoki Kobayashi; Tomoharu Kiyuna; Yoshiko Yamashita; Akira Saito; Tokiya Abe; Akinori Hashiguchi; Michiie Sakamoto
Journal:  J Med Imaging (Bellingham)       Date:  2016-06-03

5.  Multiview boosting digital pathology analysis of prostate cancer.

Authors:  Jin Tae Kwak; Stephen M Hewitt
Journal:  Comput Methods Programs Biomed       Date:  2017-02-22       Impact factor: 5.428

Review 6.  Artificial intelligence at the intersection of pathology and radiology in prostate cancer.

Authors:  Stephnie A Harmon; Sena Tuncer; Thomas Sanford; Peter L Choyke; Barış Türkbey
Journal:  Diagn Interv Radiol       Date:  2019-05       Impact factor: 2.630

7.  A supervised learning framework for pancreatic islet segmentation with multi-scale color-texture features and rolling guidance filters.

Authors:  Yue Huang; Chi Liu; John F Eisses; Sohail Z Husain; Gustavo K Rohde
Journal:  Cytometry A       Date:  2016-08-25       Impact factor: 4.355

8.  Machine learning approaches to analyze histological images of tissues from radical prostatectomies.

Authors:  Arkadiusz Gertych; Nathan Ing; Zhaoxuan Ma; Thomas J Fuchs; Sadri Salman; Sambit Mohanty; Sanica Bhele; Adriana Velásquez-Vacca; Mahul B Amin; Beatrice S Knudsen
Journal:  Comput Med Imaging Graph       Date:  2015-08-20       Impact factor: 4.790

9.  Path R-CNN for Prostate Cancer Diagnosis and Gleason Grading of Histological Images.

Authors:  Wenyuan Li; Jiayun Li; Karthik V Sarma; King Chung Ho; Shiwen Shen; Beatrice S Knudsen; Arkadiusz Gertych; Corey W Arnold
Journal:  IEEE Trans Med Imaging       Date:  2018-10-12       Impact factor: 10.048

10.  An EM-based semi-supervised deep learning approach for semantic segmentation of histopathological images from radical prostatectomies.

Authors:  Jiayun Li; William Speier; King Chung Ho; Karthik V Sarma; Arkadiusz Gertych; Beatrice S Knudsen; Corey W Arnold
Journal:  Comput Med Imaging Graph       Date:  2018-09-03       Impact factor: 4.790

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