| Literature DB >> 27560544 |
Yue Huang1,2, Chi Liu2, John F Eisses3, Sohail Z Husain3, Gustavo K Rohde4,5.
Abstract
Islet cell quantification and function is important for developing novel therapeutic interventions for diabetes. Existing methods of pancreatic islet segmentation in histopathological images depend strongly on cell/nuclei detection, and thus are limited due to a wide variance in the appearance of pancreatic islets. In this paper, we propose a supervised learning pipeline to segment pancreatic islets in histopathological images, which does not require cell detection. The proposed framework firstly partitions images into superpixels, and then extracts multi-scale color-texture features from each superpixel and processes these features using rolling guidance filters, in order to simultaneously reduce inter-class ambiguity and intra-class variation. Finally, a linear support vector machine (SVM) is trained and applied to segment the testing images. A total of 23 hematoxylin-and-eosin-stained histopathological images with pancreatic islets are used for verifying the framework. With an average accuracy of 95%, training time of 20 min and testing time of 1 min per image, the proposed framework outperforms existing approaches with better segmentation performance and lower computational cost.Entities:
Keywords: histopathological image segmentation; multi-scale features; pancreatic islet; rolling guidance filter; supervised learning
Mesh:
Year: 2016 PMID: 27560544 PMCID: PMC5515086 DOI: 10.1002/cyto.a.22929
Source DB: PubMed Journal: Cytometry A ISSN: 1552-4922 Impact factor: 4.355