| Literature DB >> 23717664 |
Amélie Bourdiec1, Ezequiel Calvo, C V Rao, Ali Akoum.
Abstract
The presence of the conceptus in uterine cavity necessitates an elaborate network of interactions between the implanting embryo and a receptive endometrial tissue. We believe that embryo-derived signals play an important role in the remodeling and the extension of endometrial receptivity period. Our previous studies provided original evidence that human Chorionic Gonadotropin (hCG) modulates and potentiates endometrial epithelial as well as stromal cell responsiveness to interleukin 1 (IL1), one of the earliest embryonic signals, which may represent a novel pathway by which the embryo favors its own implantation and growth within the maternal endometrial host. The present study was designed to gain a broader understanding of hCG impact on the modulation of endometrial cell receptivity, and in particular, cell responsiveness to IL1 and the acquisition of growth-promoting phenotype capable of receiving, sustaining, and promoting early and crucial steps of embryonic development. Our results showed significant changes in the expression of genes involved in cell proliferation, immune modulation, tissue remodeling, apoptotic and angiogenic processes. This points to a relevant impact of these embryonic signals on the receptivity of the maternal endometrium, its adaptation to the implanting embryo and the creation of an environment that is favorable for the implantation and the growth of this latter within a new and likely hostile host tissue. Interestingly our data further identified a complex interaction between IL1 and hCG, which, despite a synergistic action on several significant endometrial target genes, may encompass a tight control of endogenous IL1 and extends to other IL1 family members.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23717664 PMCID: PMC3661534 DOI: 10.1371/journal.pone.0064829
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
List of PCR primers.
| Gene | Primer | Tm°C |
| CCL2 | F-CTCTGCCGCCCTTCTGT | 60 |
| R-CTTCTTTGGGACACTTGCTG | ||
| CCL5 | F-CTCGCTGTCATCCTCA | 56 |
| R-CACTTGCCACTGGTGTA | ||
| CCL7 | F-GCCTCTGCAGCACTTCTGTG | 60 |
| R-CACTTCTGTGTGGGGTCAGC | ||
| CCL8 | F-CTTCAAGACCAAACGG | 52 |
| R-GAATCCCTGACCCAT | ||
| GAPDH | F- | 60 |
| R-TGGGTGGAATCATATTGGAACA | ||
| IL18R1 | F-CTGGAGGAGCTGTTGT | 60 |
| R-GATTAGTCTTCGGCTTT | ||
| IL1A | F-AAGACAGTTCCTCCAT | 52 |
| R-TTGCTACTACCACCAT | ||
| IL1B | F-ACAGTGGCAATGAGGATG | 58 |
| R-TGTAGTGGTGGTCGGAGA | ||
| IL1RL1 | F-CTGAGGACGCAGGTGA | 54 |
| R-CTCCGATTACTGGAAACA | ||
| IL18 | F-GCCAGCCTAGAGGTATG | 60 |
| R-GTTATCAGGAGGATTCATTT | ||
| IL33 | F-CAGGTGACGGTGTTG | 56 |
| R-TGTAGGACTCAGGGTTA | ||
| IL6 | F-GGAGACTTGCCTGGTGAA | 60 |
| R-GCATTTGTGGTTGGGTCA | ||
| KRT19 | F-CGACAATGCCCGTCTG | 58 |
| R-GCCTGTTCCGTCTCAAA | ||
| MMP10 | F-CAAGAGGCATCCATAC | 54 |
| R-AACCTTAGGCTCAACT | ||
| MMP9 | F-TTGACAGCGACAAGAAGTGG | 54 |
| R-CCCTCAGTGAAGCGGTACAT | ||
| PTGS2 | F-TCCCTTGGGTGTCAAAGGTAA | 60 |
| R-AAAACTGATGCGTGAAGTGCTG | ||
| TIMP3 | F-CTCCGACATCGTGATC | 54 |
| R-TCCTTTACCAGCTTCTT | ||
| VCAM1 | F-TGAAGGATGCGGGAGT | 58 |
| R-GCAGGTATTATTAAGGAGG | ||
| VEGFC | F-GCCAGCAACACTACCA | 58 |
| R-TTGAGTCATCTCCAGCAT |
Figure 1Analysis of genes significantly modulated by each treatment.
A) Headmap of probe sets corresponding to genes significantly modulated (P<0.05) in each group. Increased signal intensities are displayed in red, whereas lower signal intensities are shown in blue. Cluster distances were evaluated by Spearman correlation on average linkage (Partek Genomics Suite). B) PCA scatter plot of all samples was generated to assess the variability of micro-array data. Each sphere represents a whole chip data. As shown in the legend, samples are colored by treatment and grouped by an ellipsoid that considers two standard deviations from the center of each group. C) Venn diagram of the respective gene lists showing the overlap of action between hCG/MM, MM/IL1B and hCG/IL1B. Data were obtained with ESC cultures issued from 3 different subjects.
Figure 2Enrichment score of biological processes.
A) GO analysis was used to identify the main biological processes targeted by gene lists and significantly modulated by each treatment. Each functional group was assigned with a GO enrichment score that was calculated using a chi2 test. B) A forest plot using the same gene list was also generated to show the percentage of differentially expressed genes that were up-regulated (red) or down-regulated (blue) for each biological process. Light color: gene populations with a fold change ranging from 1.5 to 2. Dark color: gene populations with a fold change above 2. Data were obtained with ESC cultures issued from 3 different subjects.
Genes up-regulated after in vitro treatment of human endometrium stromal cells.
| Gene |
| FC hCG/IL1 |
| FC MM/IL1 |
| FC hCG/MM | IPA Pf. | IPA Im. | IPA Rm. | IPA CS. | IPA Ap. | IPA Ag. |
|
| 0.00001 | 35.52 | 0.00002 | 21.51 | X | X | ||||||
|
| 0.00088 | 15.06 | 0.00147 | 12.16 | X | X | X | X | X | X | ||
|
| 0.00067 | 13.94 | 0.00090 | 12.35 | X | X | X | X | ||||
|
| 0.00005 | 13.72 | 0.00027 | 8.03 | X | X | X | |||||
|
| 0.00076 | 13.13 | 0.00020 | 23.61 | X | X | X | X | X | |||
|
| 0.00000 | 12.96 | 0.00001 | 5.09 | 0.02288 | 1.60 | X | X | ||||
|
| 0.00013 | 11.79 | 0.00448 | 4.08 | X | |||||||
|
| 0.00203 | 10.48 | 0.00368 | 8.33 | X | X | X | X | X | |||
|
| 0.01045 | 9.57 | 0.03962 | 5.30 | X | X | X | X | ||||
|
| 0.00318 | 9.27 | 0.00227 | 10.59 | X | X | X | X | ||||
|
| 0.00337 | 8.42 | 0.01599 | 4.83 | X | X | X | X | ||||
|
| 0.00099 | 8.08 | X | X | X | |||||||
|
| 0.00002 | 8.07 | 0.00079 | 3.39 | X | X | ||||||
|
| 0.00077 | 7.25 | 0.00343 | 4.69 | X | X | X | |||||
|
| 0.00004 | 7.10 | ||||||||||
|
| 0.00249 | 6.74 | 0.01108 | 4.25 | X | X | X | X | ||||
|
| 0.00014 | 6.68 | 0.00064 | 4.57 | X | X | X | |||||
|
| 0.00001 | 6.56 | 0.00023 | 3.58 | X | X | X | |||||
|
| 0.00235 | 6.14 | X | X | ||||||||
|
| 0.00639 | 5.55 | ||||||||||
|
| 0.00217 | 5.26 | 0.00063 | 7.59 | X | X | X | X | ||||
|
| 0.01786 | 5.17 | 0.03330 | 4.14 | X | |||||||
|
| 0.01798 | 4.49 | 0.01483 | 4.79 | ||||||||
|
| 0.00003 | 4.14 | 0.00005 | 3.84 | X | |||||||
|
| 0.02049 | 3.95 | X | X | X | X | ||||||
|
| 0.00167 | 3.92 | 0.00162 | 3.95 | X | X | X | X | X | |||
|
| 0.00367 | 3.87 | 0.02245 | 2.57 | X | X | X | X | ||||
|
| 0.00250 | 3.85 | X | |||||||||
|
| 0.00228 | 3.81 | X | X | X | |||||||
|
| 0.00613 | 3.60 | X | X | X | X | X | |||||
|
| 0.00031 | 3.47 | X | X | ||||||||
|
| 0.00003 | 3.23 | 0.00010 | 2.76 | ||||||||
|
| 0.00001 | 3.13 | 0.00002 | 2.94 | X | X | X | X | X | |||
|
| 0.00011 | 3.07 | 0.00285 | 1.97 | X | X | X | X | ||||
|
| 0.00002 | 3.05 | 0.00215 | 1.73 | ||||||||
|
| 0.01034 | 3.02 | 0.01015 | 3.04 | X | X | ||||||
|
| 0.00093 | 2.94 | X | X | X | X | ||||||
|
| 0.00012 | 2.88 | 0.00001 | 4.43 | X | X | X | X | X | |||
|
| 0.00004 | 2.84 | X | X | X | X | ||||||
|
| 0.01123 | 2.76 | ||||||||||
|
| 0.01232 | 2.67 | 0.00250 | 3.75 | X | X | ||||||
|
| 0.00003 | 2.60 | 0.00007 | 2.37 | X | X | X | X | ||||
|
| 0.00299 | 2.54 | 0.00760 | 2.20 | X | X | ||||||
|
| 0.00019 | 2.37 | 0.00078 | 2.01 | X | X | X | X | X | |||
|
| 0.01872 | 2.35 | X | X | X | |||||||
|
| 0.04533 | 2.28 | X | |||||||||
|
| 0.01807 | 2.05 | X | X | X | X | ||||||
|
| 0.00006 | 1.93 | 0.00006 | 1.93 | X | X | X | |||||
|
| 0.00425 | 1.89 | ||||||||||
|
| 0.00242 | 1.83 | ||||||||||
|
| 0.03055 | 1.80 | X | X |
Pf, proliferation; Im, immune functions; Rm, tissue remodeling; CS, cell signaling; Ap, apoptosis; Ag, angiogenesis
Real-time PCR/ELISA validation performed
Genes up-regulated after in vitro treatment of human endometrium stromal cells
Name of down-regulated genes.
| RefSeq | Gene symbol | Genes name |
| NM_004956 | ETV1 | ets variant 1 |
| NM_002153 | HSD17B2 | hydroxysteroid (17-beta) dehydrogenase 2 |
| NM_032211 | LOXL4 | lysyl oxidase-like 4 |
| NM_001786 | CDK1 | cyclin-dependent kinase 1 |
| NM_000210 | ITGA6 | integrin, alpha 6 |
| NM_001946 | DUSP6 | dual specificity phosphatase 6 |
| NM_005415 | SLC20A1 | solute carrier family 20 (phosphate transporter), member 20 |
| NM_002692 | POLE2 | polymerase (DNA directed), epsilon 2 (p59 subunit) |
| NM_001237 | CCNA2 | cyclin A2 |
| NM_005915 | MCM6 | minichromosome maintenance complex component 6 |
| NM_002276 | KRT19 | keratin 19 |
| NM_002915 | RFC3 | replication factor C (activator 1) 3, 38kDa |
| NM_021013 | KRT34 | keratin 34 |
| NM_203394 | E2F7 | E2F transcription factor 7 |
| NR_027676 | BRCA1 | breast cancer 1, early onset |
| NM_001128620 | PAK1 | p21 protein (Cdc42/Rac)-activated kinase 1 |
| NM_018063 | HELLS | helicase, lymphoid-specific |
| NM_139314 | ANGPTL4 | angiopoietin-like 4 |
| NM_000885 | ITGA4 | integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) |
| NM_001141945 | ACTA2 | actin, alpha 2, smooth muscle, aorta |
| NM_053056 | CCND1 | cyclin D1 |
| NM_005523 | HOXA11 | homeobox A11 |
| NM_002204 | ITGA3 | integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) |
| NM_003505 | FZD1 | frizzled homolog 1 (Drosophila) |
| NM_002689 | POLA2 | polymerase (DNA directed), alpha 2 (70kD subunit) |
| NM_002213 | ITGB5 | integrin, beta 5 |
| NM_001153 | ANXA4 | annexin A4 |
| NM_000362 | TIMP3 | TIMP metallopeptidase inhibitor 3 |
| NM_020396 | BCL2L10 | BCL2-like 10 (apoptosis facilitator) |
| NM_001127217 | SMAD9 | SMAD family member 9 |
| NM_006547 | IGF2BP3 | insulin-like growth factor 2 mRNA binding protein 3 |
| NM_001735 | C5 | complement component 5 |
| NM_003243 | TGFBR3 | transforming growth factor, beta receptor III |
| NM_012098 | ANGPTL2 | angiopoietin-like 2 |
| NM_000043 | FAS | Fas (TNF receptor superfamily, member 6) |
| NM_002291 | LAMB1 | laminin, beta 1 |
| NM_148957 | TNFRSF19 | tumor necrosis factor receptor superfamily, member 19 |
| NM_025208 | PDGFD | platelet derived growth factor D |
| NM_002425 | MMP10 | matrix metallopeptidase 10 (stromelysin 2) |
| NM_000640 | IL13RA2 | interleukin 13 receptor, alpha 2 |
| NM_057749 | CCNE2 | cyclin E2 |
| NM_002658 | PLAU | plasminogen activator, urokinase |
| NM_014791 | MELK | maternal embryonic leucine zipper kinase |
| NM_002203 | ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) |
| NM_001178010 | CDC45 | cell division cycle 45 homolog (S. cerevisiae) |
| NM_006461 | SPAG5 | sperm associated antigen 5 |
| NM_000059 | BRCA2 | breast cancer 2, early onset |
| NM_024680 | E2F8 | E2F transcription factor 8 |
| NM_002422 | MMP3 | matrix metallopeptidase 3 (stromelysin 1, progelatinase) |
| NM_006739 | MCM5 | minichromosome maintenance complex component 5 |
| NM_002388 | MCM3 | minichromosome maintenance complex component 3 |
| NM_004153 | ORC1 | origin recognition complex, subunit 1 |
| NM_002592 | PCNA | proliferating cell nuclear antigen |
| NM_005225 | E2F1 | E2F transcription factor 1 |
| NM_000575 | IL1A | interleukin 1, alpha |
| NM_005438 | FOSL1 | FOS-like antigen 1 |
Figure 3hCG modulates MCPs' mRNA expression in ESCs.
Confluent ESC cultures were incubated with minimal medium (MM) (control) or hCG (100 ng/mL) for 24 h before being exposed or not to IL1B (0.1 ng/mL) for additional 24 h. Total RNA was extracted and reverse transcribed. CCL2, CCL8, CCL7 and GAPDH (internal control) mRNA levels were quantified by real-time PCR. CCL2 (A), CCL8 (B) and CCL7 (C) mRNA ratio was then determined following normalization to GAPDH mRNA. Data were from ESC cultures issued from 7 different subjects and expressed as fold change (FC) over control (ratio of CCL2, CCL8 or CCL7 mRNA levels found in cells incubated with IL1B, hCG or hCG/ILB to those found in cells incubated with MM for an equivalent period of time). *P<0.05, *** P<0.001 relative to MM; †P<0.05, †††P<0.001 relative to cells stimulated with an equivalent concentration of hCG; +P<0.05 relative to cells stimulated with an equivalent concentration of IL1B. Data were obtained with ESC cultures issued from 7 different subjects (the 3 cultures used for microarray analysis and 4 additional cultures).
Figure 4hCG modulates the IL1B-mediated mRNA expression of immune modulating, adhesion, growth, angiogenic and tissue remodeling factors in ESCs.
Confluent ESC cultures were incubated with minimal medium (MM) (control) or hCG (100 ng/mL) for 24 h before being exposed or not to IL1B (0.1 ng/mL) for additional 24 h. Total RNA was extracted and reverse transcribed, and mRNA levels were then quantified by qRT-PCR. VCAM1 (A), IL6 (B), CCL5 (C), PTGS2 (D), VEGFC (E), MMP9 (F), TIMP3 (G) and KRT19 (H) mRNA ratio was then determined following normalization to GAPDH mRNA (internal control). Data were from ESC cultures issued from 7 different subjects and expressed as fold change (FC) over control (ratio of VCAM1, IL6, CCL5, PTGS2, VEGFC, MMP9, TIMP3 or KRT19 mRNA levels found in cells incubated with IL1B, hCG or hCG/ILB to those found in cells incubated with MM for an equivalent period of time). *P<0.05, **P<0.01, *** P<0.001 relative to MM; †P<0.05, ††P<0.01, †††P<0.001 relative to cells stimulated with an equivalent concentration of hCG; +P<0.05 relative to cells stimulated with an equivalent concentration of IL1B. Data were obtained with ESC cultures issued from 7 different subjects (the 3 cultures used for microarray analysis and 4 additional cultures).
Genes down-regulated after in vitro treatment of human endometrium stromal cells.
| Gene |
| FC hCG/IL1 |
| FC MM/IL1 |
| FC hCG/MM | IPA Pf. | IPA Im. | IPA Rm. | IPA CS. | IPA Ap. | IPA Ag. |
|
| 0.02017 | −5.26 | ||||||||||
|
| 0.03976 | −5.06 | ||||||||||
|
| 0.00528 | −4.74 | 0.00435 | −5.01 | ||||||||
|
| 0.03192 | −4.25 | X | X | ||||||||
|
| 0.00651 | −3.82 | 0.01105 | −3.35 | X | X | X | |||||
|
| 0.00051 | −3.56 | 0.01223 | −2.08 | X | X | ||||||
|
| 0.00306 | −3.08 | X | |||||||||
|
| 0.00645 | −2.86 | 0.01939 | −2.31 | ||||||||
|
| 0.02166 | −2.66 | X | X | X | |||||||
|
| 0.00275 | −2.54 | ||||||||||
|
| 0.00000 | −2.50 | 0.00001 | −2.26 | ||||||||
|
| 0.00785 | −2.49 | ||||||||||
|
| 0.00247 | −2.45 | ||||||||||
|
| 0.04905 | −2.38 | X | |||||||||
|
| 0.01466 | −2.25 | 0.02641 | −2.04 | X | X | ||||||
|
| 0.00399 | −2.24 | 0.02263 | −1.77 | X | X | X | X | ||||
|
| 0.04234 | −2.22 | X | |||||||||
|
| 0.01955 | −2.09 | X | X | ||||||||
|
| 0.00435 | −2.03 | 0.00371 | −2.08 | X | X | X | X | ||||
|
| 0.01071 | −1.91 | 0.02904 | −1.68 | X | |||||||
|
| 0.00041 | −1.90 | X | X | X | |||||||
|
| 0.00279 | −1.88 | 0.00047 | −2.31 | ||||||||
|
| 0.00146 | −1.69 | X | X | X | |||||||
|
| 0.00697 | −1.58 | 0.00048 | −2.06 | X | |||||||
|
| 0.02091 | −1.51 | 0.00795 | −1.66 | ||||||||
|
| 0.03518 | −1.53 | X | X | X | X | ||||||
|
| 0.02022 | −1.53 | X | |||||||||
|
| 0.01839 | −1.57 | X | X | X | X | ||||||
|
| 0.00814 | −1.58 | X | |||||||||
|
| 0.01991 | −1.61 | ||||||||||
|
| 0.02094 | −1.62 | X | |||||||||
|
| 0.01257 | −1.68 | X | X | X | X | X | |||||
|
| 0.04598 | −1.82 | X | X | X | X | ||||||
|
| 0.02817 | −1.84 | ||||||||||
|
| 0.03925 | −1.85 | X | X | X | X | X | |||||
|
| 0.03736 | −1.91 | X | X | ||||||||
|
| 0.02307 | −2.26 | X | |||||||||
|
| 0.01484 | −3.19 | X | X | ||||||||
|
| 0.01030 | −3.91 | X | |||||||||
|
| 0.04783 | −3.64 | X | |||||||||
|
| 0.01264 | −2.78 | X | X | ||||||||
|
| 0.00713 | −2.42 | X | X | X | X | ||||||
|
| 0.01473 | −2.41 | ||||||||||
|
| 0.01329 | −2.37 | X | X | X | X | ||||||
|
| 0.01108 | −2.30 | X | X | ||||||||
|
| 0.03517 | −2.16 | ? | |||||||||
|
| 0.03864 | −1.96 | X | X | X | |||||||
|
| 0.02061 | −1.85 | X | |||||||||
|
| 0.02542 | −1.84 | X | X | X | |||||||
|
| 0.01884 | −1.79 | ||||||||||
|
| 0.02412 | −1.62 | ||||||||||
|
| 0.00293 | −1.60 | ||||||||||
|
| 0.02189 | −1.59 | X | X | ||||||||
|
| 0.00984 | −1.55 | X | X | X | X | ||||||
|
| 0.02429 | −1.52 | X | X | X | X | X | X | ||||
|
| 0.01092 | −1.50 | X | X | X |
Real-time PCR/ ELISA validation performed
Pf, proliferation; Im, immune functions; Rm, tissue remodeling; CS, cell signaling; Ap, apoptosis; Ag, angiogenesis
Figure 5hCG modulates IL1B effects on the expression of IL1 family members in ESCs.
Confluent ESC cultures were incubated with minimal medium (MM) or hCG (100 ng/mL) for 24 h before being exposed or not to IL1B (0.1 ng/mL) for additional 24 h. Total RNA was extracted and reverse transcribed, and mRNA levels were then quantified by qRT-PCR. IL1A (A), IL1B (D), IL1RL1 (B), IL18R1 (E), IL33 (C) and IL18 (F) mRNA ratio was then determined following normalization to GAPDH mRNA (internal control). Data were from ESC cultures issued from 7 different subjects and expressed as fold change (FC) over control (ratio of IL1A, IL1B, IL1RL1, IL18R1, IL33 or IL18 mRNA levels found in cells incubated with IL1B, hCG or hCG/ILB to those found in cells incubated with MM for an equivalent period of time). *P<0.05, **P<0.01, *** P<0.001 relative to MM; †P<0.05, †††P<0.001 relative to cells stimulated with an equivalent concentration of hCG; ++P<0.01 relative to cells stimulated with an equivalent concentration of IL1B. Data were obtained with ESC cultures issued from 7 different subjects (the 3 cultures used for microarray analysis and 4 additional cultures).
Figure 6hCG modulates the expression of immune, angiogenic and tissue remodeling factors in ESCs at the protein level.
Confluent ESC cultures were incubated with minimal medium (MM) or hCG (100 ng/mL) for 24 h before being exposed or not to IL1B (0.1 ng/mL) for additional 24 h. Supernatant was collected and soluble proteins CCL2 (A) CCL5 (B) VEGFC (C) TIMP3 (D) MMP9 (E) were then quantified by ELISA. Data were from ESC cultures issued from 4 different subjects and expressed in pg/mL. *P<0.05, *** P<0.001 relative to MM; ††P<0.01, †††P<0.001 relative to cells stimulated with an equivalent concentration of hCG; +P<0.05, +++P<0.001 relative to cells stimulated with an equivalent concentration of IL1B.
Name of up-regulated genes.
| RefSeq | Gene symbol | Genes name |
| NM_002993 | CXCL6 | chemokine (C-X-C motif) ligand 6 |
| NM_000600 | IL6 | interleukin 6 (interferon, beta 2) |
| NM_001511 | CXCL1 | chemokine (C-X-C motif) ligand 1 |
| NM_006290 | TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
| NM_000576 | IL1B | interleukin 1, beta |
| NM_004820 | CYP7B1 | cytochrome P450, family 7, subfamily B, polypeptide 1 |
| NM_007115 | TNFAIP6 | tumor necrosis factor, alpha-induced protein 6 |
| NM_000963 | PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) |
| NM_002985 | CCL5 | chemokine (C-C motif) ligand 5 |
| NM_000584 | IL8 | interleukin 8 |
| NM_000064 | C3 | complement component 3 |
| NM_001078 | VCAM1 | vascular cell adhesion molecule 1 |
| NM_002214 | ITGB8 | integrin, beta 8 |
| NM_002089 | CXCL2 | chemokine (C-X-C motif) ligand 2 |
| NM_006291 | TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| NM_002982 | CCL2 | chemokine (C-C motif) ligand 2 |
| NM_004079 | CTSS | cathepsin S |
| NM_007199 | IRAK3 | interleukin-1 receptor-associated kinase 3 |
| NM_001710 | CFB | complement factor B |
| NM_001002264 | EPSTI1 | epithelial stromal interaction 1 (breast) |
| NM_006850 | IL24 | interleukin 24 |
| NM_000640 | IL13RA2 | interleukin 13 receptor, alpha 2 |
| NM_002426 | MMP12 | matrix metallopeptidase 12 (macrophage elastase) |
| NM_031419 | NFKBIZ | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta |
| NM_002996 | CX3CL1 | chemokine (C-X3-C motif) ligand 1 |
| NM_002185 | IL7R | interleukin 7 receptor |
| NM_002009 | FGF7 | fibroblast growth factor 7 |
| NM_002068 | GNA15 | guanine nucleotide binding protein (G protein), alpha 15 |
| NM_002090 | CXCL3 | chemokine (C-X-C motif) ligand 3 |
| NM_000757 | CSF1 | colony stimulating factor 1 (macrophage) |
| NM_005623 | CCL8 | chemokine (C-C motif) ligand 8 |
| NM_025079 | ZC3H12A | zinc finger CCCH-type containing 12A |
| NM_000201 | ICAM1 | intercellular adhesion molecule 1 |
| NM_001012631 | IL32 | interleukin 32 |
| NM_001148 | ANK2 | ankyrin 2, neuronal |
| NM_002994 | CXCL5 | chemokine (C-X-C motif) ligand 5 |
| NM_002189 | IL15RA | interleukin 15 receptor, alpha |
| NM_000575 | IL1A | interleukin 1, alpha |
| NM_004878 | PTGES | prostaglandin E synthase |
| NM_003638 | ITGA8 | integrin, alpha 8 |
| NM_001570 | IRAK2 | interleukin-1 receptor-associated kinase 2 |
| NM_020529 | NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| NM_003391 | WNT2 | wingless-type MMTV integration site family member 2 |
| NM_002309 | LIF | leukemia inhibitory factor |
| NM_000104 | CYP1B1 | cytochrome P450, family 1, subfamily B, polypeptide 1 |
| NM_012342 | BAMBI | BMP and activin membrane-bound inhibitor homolog |
| NM_016232 | IL1RL1 | interleukin 1 receptor-like 1 |
| NM_002006 | FGF2 | fibroblast growth factor 2 (basic) |
| NM_002120 | HLA-DOB | major histocompatibility complex, class II, DO beta |
| NM_001733 | C1R | complement component 1, r subcomponent |
| NM_006273 | CCL7 | chemokine (C-C motif) ligand 7 |
| NM_201442 | C1S | complement component 1, s subcomponent |
| NM_001098479 | HLA-F | major histocompatibility complex, class I, F |
| NM_018724 | IL20 | interleukin 20 |
| NM_032682 | FOXP1 | forkhead box P1 |
| NM_003855 | IL18R1 | interleukin 18 receptor 1 |
| NM_000416 | IFNGR1 | interferon gamma receptor 1 |
| NM_000063 | C2 | complement component 2 |
| NM_003114 | SPAG1 | sperm associated antigen 1 |
| NM_000880 | IL7 | interleukin 7 |
| NM_001066 | TNFRSF1B | tumor necrosis factor receptor superfamily, member 1B |
| NM_018725 | IL17RB | interleukin 17 receptor B |
Name of up-regulated genes.