| Literature DB >> 16455752 |
James M Wettenhall1, Ken M Simpson, Keith Satterley, Gordon K Smyth.
Abstract
SUMMARY: affylmGUI is a graphical user interface (GUI) to an integrated workflow for Affymetrix microarray data. The user is able to proceed from raw data (CEL files) to QC and pre-processing, and eventually to analysis of differential expression using linear models with empirical Bayes smoothing. Output of the analysis (tables and figures) can be exported to an HTML report. The GUI provides user-friendly access to state-of-the-art methods embodied in the Bioconductor software repository. AVAILABILITY: affylmGUI is an R package freely available from http://www.bioconductor.org. It requires R version 1.9.0 or later and tcl/tk 8.3 or later and has been successfully tested on Windows 2000, Windows XP, Linux (RedHat and Fedora distributions) and Mac OS/X with X11. Further documentation is available at http://bioinf.wehi.edu.au/affylmGUI CONTACT: keith@wehi.edu.au.Entities:
Mesh：
Year: 2006 PMID： 16455752 DOI： 10.1093/bioinformatics/btl025
Source DB: PubMed Journal: Bioinformatics ISSN： 1367-4803 Impact factor: 6.937