Literature DB >> 23685863

A general approach to DNA-programmable atom equivalents.

Chuan Zhang1, Robert J Macfarlane, Kaylie L Young, Chung Hang J Choi, Liangliang Hao, Evelyn Auyeung, Guoliang Liu, Xiaozhu Zhou, Chad A Mirkin.   

Abstract

Nanoparticles can be combined with nucleic acids to programme the formation of three-dimensional colloidal crystals where the particles' size, shape, composition and position can be independently controlled. However, the diversity of the types of material that can be used is limited by the lack of a general method for preparing the basic DNA-functionalized building blocks needed to bond nanoparticles of different chemical compositions into lattices in a controllable manner. Here we show that by coating nanoparticles protected with aliphatic ligands with an azide-bearing amphiphilic polymer, followed by the coupling of DNA to the polymer using strain-promoted azide-alkyne cycloaddition (also known as copper-free azide-alkyne click chemistry), nanoparticles bearing a high-density shell of nucleic acids can be created regardless of nanoparticle composition. This method provides a route to a virtually endless class of programmable atom equivalents for DNA-based colloidal crystallization.

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Year:  2013        PMID: 23685863     DOI: 10.1038/nmat3647

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  24 in total

1.  Nanoparticle superlattice engineering with DNA.

Authors:  Robert J Macfarlane; Byeongdu Lee; Matthew R Jones; Nadine Harris; George C Schatz; Chad A Mirkin
Journal:  Science       Date:  2011-10-14       Impact factor: 47.728

2.  Maximizing DNA loading on a range of gold nanoparticle sizes.

Authors:  Sarah J Hurst; Abigail K R Lytton-Jean; Chad A Mirkin
Journal:  Anal Chem       Date:  2006-12-15       Impact factor: 6.986

3.  Design of an amphiphilic polymer for nanoparticle coating and functionalization.

Authors:  Cheng-An J Lin; Ralph A Sperling; Jimmy K Li; Ting-Ya Yang; Pei-Yun Li; Marco Zanella; Walter H Chang; Wolfgang J Parak
Journal:  Small       Date:  2008-03       Impact factor: 13.281

4.  DNA-guided crystallization of colloidal nanoparticles.

Authors:  Dmytro Nykypanchuk; Mathew M Maye; Daniel van der Lelie; Oleg Gang
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

5.  Molecular recognition and self-assembly special feature: Assembly and organization processes in DNA-directed colloidal crystallization.

Authors:  Robert J Macfarlane; Byeongdu Lee; Haley D Hill; Andrew J Senesi; Soenke Seifert; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-19       Impact factor: 11.205

6.  Controlling the lattice parameters of gold nanoparticle FCC crystals with duplex DNA linkers.

Authors:  Haley D Hill; Robert J Macfarlane; Andrew J Senesi; Byeongdu Lee; Sung Yong Park; Chad A Mirkin
Journal:  Nano Lett       Date:  2008-06-24       Impact factor: 11.189

7.  Binary heterogeneous superlattices assembled from quantum dots and gold nanoparticles with DNA.

Authors:  Dazhi Sun; Oleg Gang
Journal:  J Am Chem Soc       Date:  2011-03-22       Impact factor: 15.419

8.  Establishing the design rules for DNA-mediated programmable colloidal crystallization.

Authors:  Robert J Macfarlane; Matthew R Jones; Andrew J Senesi; Kaylie L Young; Byeongdu Lee; Jinsong Wu; Chad A Mirkin
Journal:  Angew Chem Int Ed Engl       Date:  2010-06-21       Impact factor: 15.336

9.  Forming biocompatible and nonaggregated nanocrystals in water using amphiphilic polymers.

Authors:  William W Yu; Emmanuel Chang; Joshua C Falkner; Junyan Zhang; Ali M Al-Somali; Christie M Sayes; Judah Johns; Rebekah Drezek; Vicki L Colvin
Journal:  J Am Chem Soc       Date:  2007-02-20       Impact factor: 15.419

10.  A strain-promoted [3 + 2] azide-alkyne cycloaddition for covalent modification of biomolecules in living systems.

Authors:  Nicholas J Agard; Jennifer A Prescher; Carolyn R Bertozzi
Journal:  J Am Chem Soc       Date:  2004-11-24       Impact factor: 15.419

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  47 in total

1.  Nanoparticle self-assembly: Bonding them all.

Authors:  Ulrich Simon
Journal:  Nat Mater       Date:  2013-08       Impact factor: 43.841

2.  DNA-mediated nanoparticle crystallization into Wulff polyhedra.

Authors:  Evelyn Auyeung; Ting I N G Li; Andrew J Senesi; Abrin L Schmucker; Bridget C Pals; Monica Olvera de la Cruz; Chad A Mirkin
Journal:  Nature       Date:  2013-11-27       Impact factor: 49.962

3.  Prescribed nanoparticle cluster architectures and low-dimensional arrays built using octahedral DNA origami frames.

Authors:  Ye Tian; Tong Wang; Wenyan Liu; Huolin L Xin; Huilin Li; Yonggang Ke; William M Shih; Oleg Gang
Journal:  Nat Nanotechnol       Date:  2015-05-25       Impact factor: 39.213

4.  Size limits of self-assembled colloidal structures made using specific interactions.

Authors:  Zorana Zeravcic; Vinothan N Manoharan; Michael P Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-27       Impact factor: 11.205

5.  Plasmonic photonic crystals realized through DNA-programmable assembly.

Authors:  Daniel J Park; Chuan Zhang; Jessie C Ku; Yu Zhou; George C Schatz; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

6.  Mighty linkers.

Authors: 
Journal:  Nat Mater       Date:  2015-08       Impact factor: 43.841

7.  DNA-mediated engineering of multicomponent enzyme crystals.

Authors:  Jeffrey D Brodin; Evelyn Auyeung; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

8.  Directional emission from dye-functionalized plasmonic DNA superlattice microcavities.

Authors:  Daniel J Park; Jessie C Ku; Lin Sun; Clotilde M Lethiec; Nathaniel P Stern; George C Schatz; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-04       Impact factor: 11.205

9.  Biodegradable DNA-Brush Block Copolymer Spherical Nucleic Acids Enable Transfection Agent-Free Intracellular Gene Regulation.

Authors:  Chuan Zhang; Liangliang Hao; Colin M Calabrese; Yu Zhou; Chung Hang J Choi; Hang Xing; Chad A Mirkin
Journal:  Small       Date:  2015-08-21       Impact factor: 13.281

10.  Nanoparticle crystallization: DNA-bonded 'atoms'.

Authors:  Shogo Hamada; Shawn J Tan; Dan Luo
Journal:  Nat Mater       Date:  2014-02       Impact factor: 43.841

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