Literature DB >> 23621425

An efficient system for heterologous expression of secondary metabolite genes in Aspergillus nidulans.

Yi-Ming Chiang1, C Elizabeth Oakley, Manmeet Ahuja, Ruth Entwistle, Aric Schultz, Shu-Lin Chang, Calvin T Sung, Clay C C Wang, Berl R Oakley.   

Abstract

Fungal secondary metabolites (SMs) are an important source of medically valuable compounds. Genome projects have revealed that fungi have many SM biosynthetic gene clusters that are not normally expressed. To access these potentially valuable, cryptic clusters, we have developed a heterologous expression system in Aspergillus nidulans . We have developed an efficient system for amplifying genes from a target fungus, placing them under control of a regulatable promoter, transferring them into A. nidulans , and expressing them. We have validated this system by expressing nonreducing polyketide synthases of Aspergillus terreus and additional genes required for compound production and release. We have obtained compound production and release from six of these nonreducing polyketide synthases and have identified the products. To demonstrate that the procedure allows transfer and expression of entire secondary metabolite biosynthetic pathways, we have expressed all the genes of a silent A. terreus cluster and demonstrate that it produces asperfuranone. Further, by expressing the genes of this pathway in various combinations, we have clarified the asperfuranone biosynthetic pathway. We have also developed procedures for deleting entire A. nidulans SM clusters. This allows us to remove clusters that might interfere with analyses of heterologously expressed genes and to eliminate unwanted toxins.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23621425      PMCID: PMC3697937          DOI: 10.1021/ja401945a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  55 in total

Review 1.  Chemoinformatics methods for systematic comparison of molecules from natural and synthetic sources and design of hybrid libraries.

Authors:  Jürgen Bajorath
Journal:  Mol Divers       Date:  2002       Impact factor: 2.943

Review 2.  Natural products as a hunting ground for combinatorial chemistry.

Authors:  A Ganesan
Journal:  Curr Opin Biotechnol       Date:  2004-12       Impact factor: 9.740

3.  Rapid cloning and expression of a fungal polyketide synthase gene involved in squalestatin biosynthesis.

Authors:  Russell J Cox; Frank Glod; Deirdre Hurley; Colin M Lazarus; Thomas P Nicholson; Brian A M Rudd; Thomas J Simpson; Barrie Wilkinson; Ying Zhang
Journal:  Chem Commun (Camb)       Date:  2004-09-24       Impact factor: 6.222

4.  Genomic clones of Aspergillus nidulans containing alcA, the structural gene for alcohol dehydrogenase and alcR, a regulatory gene for ethanol metabolism.

Authors:  C H Doy; J A Pateman; J E Olsen; H J Kane; E H Creaser
Journal:  DNA       Date:  1985-04

5.  Comparative characterization of fungal anthracenone and naphthacenedione biosynthetic pathways reveals an α-hydroxylation-dependent Claisen-like cyclization catalyzed by a dimanganese thioesterase.

Authors:  Yanran Li; Yit-Heng Chooi; Yuewei Sheng; Joan S Valentine; Yi Tang
Journal:  J Am Chem Soc       Date:  2011-09-14       Impact factor: 15.419

6.  Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans.

Authors:  Volker Schroeckh; Kirstin Scherlach; Hans-Wilhelm Nützmann; Ekaterina Shelest; Wolfgang Schmidt-Heck; Julia Schuemann; Karin Martin; Christian Hertweck; Axel A Brakhage
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-06       Impact factor: 11.205

7.  Genomic mining for Aspergillus natural products.

Authors:  Jin Woo Bok; Dirk Hoffmeister; Lori A Maggio-Hall; Renato Murillo; Jeremy D Glasner; Nancy P Keller
Journal:  Chem Biol       Date:  2006-01

8.  Accurate prediction of the Aspergillus nidulans terrequinone gene cluster boundaries using the transcriptional regulator LaeA.

Authors:  Sarah Bouhired; Monika Weber; Anita Kempf-Sontag; Nancy P Keller; Dirk Hoffmeister
Journal:  Fungal Genet Biol       Date:  2007-01-08       Impact factor: 3.495

9.  Versatile enzyme expression and characterization system for Aspergillus nidulans, with the Penicillium brevicompactum polyketide synthase gene from the mycophenolic acid gene cluster as a test case.

Authors:  Bjarne G Hansen; Bo Salomonsen; Morten T Nielsen; Jakob B Nielsen; Niels B Hansen; Kristian F Nielsen; Torsten B Regueira; Jens Nielsen; Kiran R Patil; Uffe H Mortensen
Journal:  Appl Environ Microbiol       Date:  2011-03-11       Impact factor: 4.792

10.  Chemical induction of silent biosynthetic pathway transcription in Aspergillus niger.

Authors:  K M Fisch; A F Gillaspy; M Gipson; J C Henrikson; A R Hoover; L Jackson; F Z Najar; H Wägele; R H Cichewicz
Journal:  J Ind Microbiol Biotechnol       Date:  2009-06-12       Impact factor: 3.346

View more
  54 in total

Review 1.  Advances in linking polyketides and non-ribosomal peptides to their biosynthetic gene clusters in Fusarium.

Authors:  Mikkel Rank Nielsen; Teis Esben Sondergaard; Henriette Giese; Jens Laurids Sørensen
Journal:  Curr Genet       Date:  2019-05-28       Impact factor: 3.886

Review 2.  Strategies for mining fungal natural products.

Authors:  Philipp Wiemann; Nancy P Keller
Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-22       Impact factor: 3.346

Review 3.  Cytoplasmic dynein and early endosome transport.

Authors:  Xin Xiang; Rongde Qiu; Xuanli Yao; Herbert N Arst; Miguel A Peñalva; Jun Zhang
Journal:  Cell Mol Life Sci       Date:  2015-05-23       Impact factor: 9.261

Review 4.  Recent advances in natural product discovery.

Authors:  Yunzi Luo; Ryan E Cobb; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2014-09-26       Impact factor: 9.740

5.  Use of a biosynthetic intermediate to explore the chemical diversity of pseudo-natural fungal polyketides.

Authors:  Teigo Asai; Kento Tsukada; Satomi Ise; Naoki Shirata; Makoto Hashimoto; Isao Fujii; Katsuya Gomi; Kosuke Nakagawara; Eiichi N Kodama; Yoshiteru Oshima
Journal:  Nat Chem       Date:  2015-08-03       Impact factor: 24.427

Review 6.  Genetic platforms for heterologous expression of microbial natural products.

Authors:  Jia Jia Zhang; Xiaoyu Tang; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2019-06-14       Impact factor: 13.423

7.  In the fungus where it happens: History and future propelling Aspergillus nidulans as the archetype of natural products research.

Authors:  Lindsay K Caesar; Neil L Kelleher; Nancy P Keller
Journal:  Fungal Genet Biol       Date:  2020-10-06       Impact factor: 3.495

8.  Overexpression of a three-gene conidial pigment biosynthetic pathway in Aspergillus nidulans reveals the first NRPS known to acetylate tryptophan.

Authors:  Calvin T Sung; Shu-Lin Chang; Ruth Entwistle; Green Ahn; Tzu-Shyang Lin; Vessela Petrova; Hsu-Hua Yeh; Mike B Praseuth; Yi-Ming Chiang; Berl R Oakley; Clay C C Wang
Journal:  Fungal Genet Biol       Date:  2017-01-17       Impact factor: 3.495

9.  Discovery of McrA, a master regulator of Aspergillus secondary metabolism.

Authors:  C Elizabeth Oakley; Manmeet Ahuja; Wei-Wen Sun; Ruth Entwistle; Tomohiro Akashi; Junko Yaegashi; Chun-Jun Guo; Gustavo C Cerqueira; Jennifer Russo Wortman; Clay C C Wang; Yi-Ming Chiang; Berl R Oakley
Journal:  Mol Microbiol       Date:  2016-11-14       Impact factor: 3.501

10.  Reinvigorating natural product combinatorial biosynthesis with synthetic biology.

Authors:  Eunji Kim; Bradley S Moore; Yeo Joon Yoon
Journal:  Nat Chem Biol       Date:  2015-09       Impact factor: 15.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.