Literature DB >> 23587694

Mean apparent propagator (MAP) MRI: a novel diffusion imaging method for mapping tissue microstructure.

Evren Özarslan1, Cheng Guan Koay, Timothy M Shepherd, Michal E Komlosh, M Okan İrfanoğlu, Carlo Pierpaoli, Peter J Basser.   

Abstract

Diffusion-weighted magnetic resonance (MR) signals reflect information about underlying tissue microstructure and cytoarchitecture. We propose a quantitative, efficient, and robust mathematical and physical framework for representing diffusion-weighted MR imaging (MRI) data obtained in "q-space," and the corresponding "mean apparent propagator (MAP)" describing molecular displacements in "r-space." We also define and map novel quantitative descriptors of diffusion that can be computed robustly using this MAP-MRI framework. We describe efficient analytical representation of the three-dimensional q-space MR signal in a series expansion of basis functions that accurately describes diffusion in many complex geometries. The lowest order term in this expansion contains a diffusion tensor that characterizes the Gaussian displacement distribution, equivalent to diffusion tensor MRI (DTI). Inclusion of higher order terms enables the reconstruction of the true average propagator whose projection onto the unit "displacement" sphere provides an orientational distribution function (ODF) that contains only the orientational dependence of the diffusion process. The representation characterizes novel features of diffusion anisotropy and the non-Gaussian character of the three-dimensional diffusion process. Other important measures this representation provides include the return-to-the-origin probability (RTOP), and its variants for diffusion in one- and two-dimensions-the return-to-the-plane probability (RTPP), and the return-to-the-axis probability (RTAP), respectively. These zero net displacement probabilities measure the mean compartment (pore) volume and cross-sectional area in distributions of isolated pores irrespective of the pore shape. MAP-MRI represents a new comprehensive framework to model the three-dimensional q-space signal and transform it into diffusion propagators. Experiments on an excised marmoset brain specimen demonstrate that MAP-MRI provides several novel, quantifiable parameters that capture previously obscured intrinsic features of nervous tissue microstructure. This should prove helpful for investigating the functional organization of normal and pathologic nervous tissue.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2013        PMID: 23587694      PMCID: PMC4059870          DOI: 10.1016/j.neuroimage.2013.04.016

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  52 in total

1.  Color schemes to represent the orientation of anisotropic tissues from diffusion tensor data: application to white matter fiber tract mapping in the human brain.

Authors:  S Pajevic; C Pierpaoli
Journal:  Magn Reson Med       Date:  1999-09       Impact factor: 4.668

2.  Relationships between diffusion tensor and q-space MRI.

Authors:  Peter J Basser
Journal:  Magn Reson Med       Date:  2002-02       Impact factor: 4.668

3.  Characterization of anisotropy in high angular resolution diffusion-weighted MRI.

Authors:  Lawrence R Frank
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

4.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging.

Authors:  Evren Ozarslan; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

5.  Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus.

Authors:  Timothy M Shepherd; Evren Ozarslan; Michael A King; Thomas H Mareci; Stephen J Blackband
Journal:  Neuroimage       Date:  2006-06-27       Impact factor: 6.556

6.  Effect of impermeable boundaries on diffusion-attenuated MR signal.

Authors:  Astrid F Frøhlich; Leif Ostergaard; Valerij G Kiselev
Journal:  J Magn Reson       Date:  2006-01-10       Impact factor: 2.229

7.  Parsimonious model selection for tissue segmentation and classification applications: a study using simulated and experimental DTI data.

Authors:  Raisa Z Freidlin; Evren Ozarslan; Michal E Komlosh; Lin-Ching Chang; Cheng Guan Koay; Derek K Jones; Peter J Basser
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

8.  Multiple q-shell diffusion propagator imaging.

Authors:  Maxime Descoteaux; Rachid Deriche; Denis Le Bihan; Jean-François Mangin; Cyril Poupon
Journal:  Med Image Anal       Date:  2010-07-14       Impact factor: 8.545

9.  Sparse multi-shell diffusion imaging.

Authors:  Yogesh Rathi; O Michailovich; K Setsompop; S Bouix; M E Shenton; C F Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

10.  Compartment shape anisotropy (CSA) revealed by double pulsed field gradient MR.

Authors:  Evren Ozarslan
Journal:  J Magn Reson       Date:  2009-04-10       Impact factor: 2.229

View more
  94 in total

1.  Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited.

Authors:  Cibu Thomas; Frank Q Ye; M Okan Irfanoglu; Pooja Modi; Kadharbatcha S Saleem; David A Leopold; Carlo Pierpaoli
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

2.  Age effects and sex differences in human brain white matter of young to middle-aged adults: A DTI, NODDI, and q-space study.

Authors:  Chandana Kodiweera; Andrew L Alexander; Jaroslaw Harezlak; Thomas W McAllister; Yu-Chien Wu
Journal:  Neuroimage       Date:  2015-12-24       Impact factor: 6.556

3.  Estimating diffusion propagator and its moments using directional radial basis functions.

Authors:  Lipeng Ning; Carl-Fredrik Westin; Yogesh Rathi
Journal:  IEEE Trans Med Imaging       Date:  2015-03-31       Impact factor: 10.048

Review 4.  A review of neuroimaging findings in repetitive brain trauma.

Authors:  Inga K Koerte; Alexander P Lin; Anna Willems; Marc Muehlmann; Jakob Hufschmidt; Michael J Coleman; Isobel Green; Huijun Liao; David F Tate; Elisabeth A Wilde; Ofer Pasternak; Sylvain Bouix; Yogesh Rathi; Erin D Bigler; Robert A Stern; Martha E Shenton
Journal:  Brain Pathol       Date:  2015-05       Impact factor: 6.508

Review 5.  Glial Regulation of the Neuronal Connectome through Local and Long-Distant Communication.

Authors:  R Douglas Fields; Dong Ho Woo; Peter J Basser
Journal:  Neuron       Date:  2015-04-22       Impact factor: 17.173

6.  Single- and Multiple-Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes.

Authors:  Jian Cheng; Dinggang Shen; Pew-Thian Yap; Peter J Basser
Journal:  IEEE Trans Med Imaging       Date:  2017-09-25       Impact factor: 10.048

7.  Design and validation of diffusion MRI models of white matter.

Authors:  Ileana O Jelescu; Matthew D Budde
Journal:  Front Phys       Date:  2017-11-28

8.  Precise Inference and Characterization of Structural Organization (PICASO) of tissue from molecular diffusion.

Authors:  Lipeng Ning; Evren Özarslan; Carl-Fredrik Westin; Yogesh Rathi
Journal:  Neuroimage       Date:  2016-10-14       Impact factor: 6.556

9.  Tensorial Spherical Polar Fourier Diffusion MRI with Optimal Dictionary Learning.

Authors:  Jian Cheng; Dinggang Shen; Pew-Thian Yap; Peter J Basser
Journal:  Med Image Comput Comput Assist Interv       Date:  2015-11-18

10.  Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations.

Authors:  Gaëtan Rensonnet; Benoît Scherrer; Gabriel Girard; Aleksandar Jankovski; Simon K Warfield; Benoît Macq; Jean-Philippe Thiran; Maxime Taquet
Journal:  Neuroimage       Date:  2018-09-30       Impact factor: 6.556

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.