Literature DB >> 19398210

Compartment shape anisotropy (CSA) revealed by double pulsed field gradient MR.

Evren Ozarslan1.   

Abstract

The multiple scattering extensions of the pulsed field gradient (PFG) experiments can be used to characterize restriction-induced anisotropy at different length scales. In double-PFG acquisitions that involve two pairs of diffusion gradient pulses, the dependence of the MR signal attenuation on the angle between the two gradients is a signature of restriction that can be observed even at low gradient strengths. In this article, a comprehensive theoretical treatment of the double-PFG observation of restricted diffusion is presented. In the first part of the article, the problem is treated for arbitrarily shaped pores under idealized experimental conditions, comprising infinitesimally narrow gradient pulses with long separation times and long or vanishing mixing times. New insights are obtained when the treatment is applied to simple pore shapes of spheres, ellipsoids, and capped cylinders. The capped cylinder geometry is considered in the second part of the article where the solution for a double-PFG experiment with arbitrary experimental parameters is introduced. Although compartment shape anisotropy (CSA) is emphasized here, the findings of this article can be used in gleaning the volume, eccentricity, and orientation distribution function associated with ensembles of anisotropic compartments using double-PFG acquisitions with arbitrary experimental parameters.

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Year:  2009        PMID: 19398210      PMCID: PMC2696938          DOI: 10.1016/j.jmr.2009.04.002

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  28 in total

1.  Theory of spin echo in restricted geometries under a step-wise gradient pulse sequence.

Authors:  A V Barzykin
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

2.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging.

Authors:  Evren Ozarslan; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

3.  Evolution of a lamellar domain structure for an equilibrating lyotropic liquid crystal.

Authors:  Penny L Hubbard; Kathryn M McGrath; Paul T Callaghan
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4.  Residence times and other functionals of reflected Brownian motion.

Authors:  D S Grebenkov
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-10-30

5.  A general framework to quantify the effect of restricted diffusion on the NMR signal with applications to double pulsed field gradient NMR experiments.

Authors:  Evren Ozarslan; Noam Shemesh; Peter J Basser
Journal:  J Chem Phys       Date:  2009-03-14       Impact factor: 3.488

6.  The effect of experimental parameters on the signal decay in double-PGSE experiments: negative diffractions and enhancement of structural information.

Authors:  Noam Shemesh; Yoram Cohen
Journal:  J Magn Reson       Date:  2008-09-17       Impact factor: 2.229

7.  Microscopic anisotropy revealed by NMR double pulsed field gradient experiments with arbitrary timing parameters.

Authors:  Evren Ozarslan; Peter J Basser
Journal:  J Chem Phys       Date:  2008-04-21       Impact factor: 3.488

8.  Detection of microscopic anisotropy in gray matter and in a novel tissue phantom using double Pulsed Gradient Spin Echo MR.

Authors:  M E Komlosh; F Horkay; R Z Freidlin; U Nevo; Y Assaf; P J Basser
Journal:  J Magn Reson       Date:  2007-07-18       Impact factor: 2.229

9.  Multiple wave-vector extensions of the NMR pulsed-field-gradient spin-echo diffusion measurement.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1995-06-01

10.  MR diffusion - "diffraction" phenomenon in multi-pulse-field-gradient experiments.

Authors:  Evren Ozarslan; Peter J Basser
Journal:  J Magn Reson       Date:  2007-08-09       Impact factor: 2.229

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  39 in total

1.  Noninvasive bipolar double-pulsed-field-gradient NMR reveals signatures for pore size and shape in polydisperse, randomly oriented, inhomogeneous porous media.

Authors:  Noam Shemesh; Evren Ozarslan; Tal Adiri; Peter J Basser; Yoram Cohen
Journal:  J Chem Phys       Date:  2010-07-28       Impact factor: 3.488

2.  Temporal scaling characteristics of diffusion as a new MRI contrast: findings in rat hippocampus.

Authors:  Evren Özarslan; Timothy M Shepherd; Cheng Guan Koay; Stephen J Blackband; Peter J Basser
Journal:  Neuroimage       Date:  2012-01-26       Impact factor: 6.556

3.  Nonparametric pore size distribution using d-PFG: comparison to s-PFG and migration to MRI.

Authors:  Dan Benjamini; Michal E Komlosh; Peter J Basser; Uri Nevo
Journal:  J Magn Reson       Date:  2014-06-30       Impact factor: 2.229

4.  Joint radius-length distribution as a measure of anisotropic pore eccentricity: an experimental and analytical framework.

Authors:  Dan Benjamini; Peter J Basser
Journal:  J Chem Phys       Date:  2014-12-07       Impact factor: 3.488

Review 5.  Studying neuroanatomy using MRI.

Authors:  Jason P Lerch; André J W van der Kouwe; Armin Raznahan; Tomáš Paus; Heidi Johansen-Berg; Karla L Miller; Stephen M Smith; Bruce Fischl; Stamatios N Sotiropoulos
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

6.  In vivo microscopic diffusional kurtosis imaging with symmetrized double diffusion encoding EPI.

Authors:  Yang Ji; Jeffrey Paulsen; Iris Yuwen Zhou; Dongshuang Lu; Patrick Machado; Bensheng Qiu; Yi-Qiao Song; Phillip Zhe Sun
Journal:  Magn Reson Med       Date:  2018-09-09       Impact factor: 4.668

7.  Precise Inference and Characterization of Structural Organization (PICASO) of tissue from molecular diffusion.

Authors:  Lipeng Ning; Evren Özarslan; Carl-Fredrik Westin; Yogesh Rathi
Journal:  Neuroimage       Date:  2016-10-14       Impact factor: 6.556

8.  Mean apparent propagator (MAP) MRI: a novel diffusion imaging method for mapping tissue microstructure.

Authors:  Evren Özarslan; Cheng Guan Koay; Timothy M Shepherd; Michal E Komlosh; M Okan İrfanoğlu; Carlo Pierpaoli; Peter J Basser
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

9.  Mapping average axon diameters in porcine spinal cord white matter and rat corpus callosum using d-PFG MRI.

Authors:  M E Komlosh; E Özarslan; M J Lizak; I Horkayne-Szakaly; R Z Freidlin; F Horkay; P J Basser
Journal:  Neuroimage       Date:  2013-04-10       Impact factor: 6.556

10.  Preliminary evaluation of accelerated microscopic diffusional kurtosis imaging (μDKI) in a rodent model of epilepsy.

Authors:  Yang Ji; Dongshuang Lu; Limin Wu; Bensheng Qiu; Yi-Qiao Song; Phillip Zhe Sun
Journal:  Magn Reson Imaging       Date:  2018-10-20       Impact factor: 2.546

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