Literature DB >> 23574790

Curvature correction of retinal OCTs using graph-based geometry detection.

Raheleh Kafieh1, Hossein Rabbani, Michael D Abramoff, Milan Sonka.   

Abstract

In this paper, we present a new algorithm as an enhancement and preprocessing step for acquired optical coherence tomography (OCT) images of the retina. The proposed method is composed of two steps, first of which is a denoising algorithm with wavelet diffusion based on a circular symmetric Laplacian model, and the second part can be described in terms of graph-based geometry detection and curvature correction according to the hyper-reflective complex layer in the retina. The proposed denoising algorithm showed an improvement of contrast-to-noise ratio from 0.89 to 1.49 and an increase of signal-to-noise ratio (OCT image SNR) from 18.27 to 30.43 dB. By applying the proposed method for estimation of the interpolated curve using a full automatic method, the mean ± SD unsigned border positioning error was calculated for normal and abnormal cases. The error values of 2.19 ± 1.25 and 8.53 ± 3.76 µm were detected for 200 randomly selected slices without pathological curvature and 50 randomly selected slices with pathological curvature, respectively. The important aspect of this algorithm is its ability in detection of curvature in strongly pathological images that surpasses previously introduced methods; the method is also fast, compared to the relatively low speed of similar methods.

Entities:  

Mesh:

Year:  2013        PMID: 23574790      PMCID: PMC3794717          DOI: 10.1088/0031-9155/58/9/2925

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  18 in total

1.  Retinal thickness measurements from optical coherence tomography using a Markov boundary model.

Authors:  D Koozekanani; K Boyer; C Roberts
Journal:  IEEE Trans Med Imaging       Date:  2001-09       Impact factor: 10.048

2.  Intra-retinal layer segmentation in optical coherence tomography using an active contour approach.

Authors:  Azadeh Yazdanpanah; Ghassan Hamarneh; Benjamin Smith; Marinko Sarunic
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

3.  Quantitative thickness measurement of retinal layers imaged by optical coherence tomography.

Authors:  Mahnaz Shahidi; Zhangwei Wang; Ruth Zelkha
Journal:  Am J Ophthalmol       Date:  2005-06       Impact factor: 5.258

4.  Segmentation of three-dimensional retinal image data.

Authors:  Alfred Fuller; Robert Zawadzki; Stacey Choi; David Wiley; John Werner; Bernd Hamann
Journal:  IEEE Trans Vis Comput Graph       Date:  2007 Nov-Dec       Impact factor: 4.579

5.  Nonlinear multiscale wavelet diffusion for speckle suppression and edge enhancement in ultrasound images.

Authors:  Yong Yue; Mihai M Croitoru; Akhil Bidani; Joseph B Zwischenberger; John W Clark
Journal:  IEEE Trans Med Imaging       Date:  2006-03       Impact factor: 10.048

6.  Characterization of outer retinal morphology with high-speed, ultrahigh-resolution optical coherence tomography.

Authors:  Vivek J Srinivasan; Bryan K Monson; Maciej Wojtkowski; Richard A Bilonick; Iwona Gorczynska; Royce Chen; Jay S Duker; Joel S Schuman; James G Fujimoto
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-04       Impact factor: 4.799

7.  Optical coherence tomography.

Authors:  D Huang; E A Swanson; C P Lin; J S Schuman; W G Stinson; W Chang; M R Hee; T Flotte; K Gregory; C A Puliafito
Journal:  Science       Date:  1991-11-22       Impact factor: 47.728

8.  Three-dimensional analysis of retinal layer texture: identification of fluid-filled regions in SD-OCT of the macula.

Authors:  Gwénolé Quellec; Kyungmoo Lee; Martin Dolejsi; Mona K Garvin; Michael D Abràmoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2010-04-01       Impact factor: 10.048

9.  Macular segmentation with optical coherence tomography.

Authors:  Hiroshi Ishikawa; Daniel M Stein; Gadi Wollstein; Siobahn Beaton; James G Fujimoto; Joel S Schuman
Journal:  Invest Ophthalmol Vis Sci       Date:  2005-06       Impact factor: 4.799

10.  Thickness profiles of retinal layers by optical coherence tomography image segmentation.

Authors:  Ahmet Murat Bagci; Mahnaz Shahidi; Rashid Ansari; Michael Blair; Norman Paul Blair; Ruth Zelkha
Journal:  Am J Ophthalmol       Date:  2008-08-15       Impact factor: 5.258

View more
  8 in total

1.  Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map.

Authors:  Raheleh Kafieh; Hossein Rabbani; Michael D Abramoff; Milan Sonka
Journal:  Med Image Anal       Date:  2013-06-11       Impact factor: 8.545

2.  Self-supervised patient-specific features learning for OCT image classification.

Authors:  Leyuan Fang; Jiahuan Guo; Xingxin He; Muxing Li
Journal:  Med Biol Eng Comput       Date:  2022-08-05       Impact factor: 3.079

3.  Convolutional Mixture of Experts Model: A Comparative Study on Automatic Macular Diagnosis in Retinal Optical Coherence Tomography Imaging.

Authors:  Reza Rasti; Alireza Mehridehnavi; Hossein Rabbani; Fedra Hajizadeh
Journal:  J Med Signals Sens       Date:  2019 Jan-Mar

4.  Isfahan MISP Dataset.

Authors:  Masoud Kashefpur; Rahele Kafieh; Sahar Jorjandi; Hadis Golmohammadi; Zahra Khodabande; Mohammadreza Abbasi; Nilufar Teifuri; Ali Akbar Fakharzadeh; Maryam Kashefpoor; Hossein Rabbani
Journal:  J Med Signals Sens       Date:  2017 Jan-Mar

5.  Automatic detection of retinal regions using fully convolutional networks for diagnosis of abnormal maculae in optical coherence tomography images.

Authors:  Zhongyang Sun; Yankui Sun
Journal:  J Biomed Opt       Date:  2019-05       Impact factor: 3.170

6.  Automatic Annotation of Retinal Layers in Optical Coherence Tomography Images.

Authors:  Bashir Isa Dodo; Yongmin Li; Khalid Eltayef; Xiaohui Liu
Journal:  J Med Syst       Date:  2019-11-13       Impact factor: 4.460

7.  Evaluation of Asymmetry in Right and Left Eyes of Normal Individuals Using Extracted Features from Optical Coherence Tomography and Fundus Images.

Authors:  Tahereh Mahmudi; Raheleh Kafieh; Hossein Rabbani; Alireza Mehri; Mohammad-Reza Akhlaghi
Journal:  J Med Signals Sens       Date:  2021-01-30

8.  Retinal status analysis method based on feature extraction and quantitative grading in OCT images.

Authors:  Dongmei Fu; Hejun Tong; Shuang Zheng; Ling Luo; Fulin Gao; Jiri Minar
Journal:  Biomed Eng Online       Date:  2016-07-22       Impact factor: 2.819

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.