Literature DB >> 17968130

Segmentation of three-dimensional retinal image data.

Alfred Fuller1, Robert Zawadzki, Stacey Choi, David Wiley, John Werner, Bernd Hamann.   

Abstract

We have combined methods from volume visualization and data analysis to support better diagnosis and treatment of human retinal diseases. Many diseases can be identified by abnormalities in the thicknesses of various retinal layers captured using optical coherence tomography (OCT). We used a support vector machine (SVM) to perform semi-automatic segmentation of retinal layers for subsequent analysis including a comparison of layer thicknesses to known healthy parameters. We have extended and generalized an older SVM approach to support better performance in a clinical setting through performance enhancements and graceful handling of inherent noise in OCT data by considering statistical characteristics at multiple levels of resolution. The addition of the multi-resolution hierarchy extends the SVM to have "global awareness." A feature, such as a retinal layer, can therefore be modeled.

Entities:  

Mesh:

Year:  2007        PMID: 17968130      PMCID: PMC4161881          DOI: 10.1109/TVCG.2007.70590

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  10 in total

1.  Application of rapid scanning retinal thickness analysis in retinal diseases.

Authors:  S Asrani; R Zeimer; M F Goldberg; S Zou
Journal:  Ophthalmology       Date:  1997-07       Impact factor: 12.079

2.  An intelligent system approach to higher-dimensional classification of volume data.

Authors:  Fan-Yin Tzeng; Eric B Lum; Kwan-Liu Ma
Journal:  IEEE Trans Vis Comput Graph       Date:  2005 May-Jun       Impact factor: 4.579

3.  Three-dimensional retinal imaging with high-speed ultrahigh-resolution optical coherence tomography.

Authors:  Maciej Wojtkowski; Vivek Srinivasan; James G Fujimoto; Tony Ko; Joel S Schuman; Andrzej Kowalczyk; Jay S Duker
Journal:  Ophthalmology       Date:  2005-10       Impact factor: 12.079

4.  A comparison of neural network and fuzzy clustering techniques in segmenting magnetic resonance images of the brain.

Authors:  L O Hall; A M Bensaid; L P Clarke; R P Velthuizen; M S Silbiger; J C Bezdek
Journal:  IEEE Trans Neural Netw       Date:  1992

5.  An introduction to kernel-based learning algorithms.

Authors:  K R Müller; S Mika; G Rätsch; K Tsuda; B Schölkopf
Journal:  IEEE Trans Neural Netw       Date:  2001

6.  Retinal nerve fiber layer thickness map determined from optical coherence tomography images.

Authors:  Mircea Mujat; Raymond Chan; Barry Cense; B Park; Chulmin Joo; Taner Akkin; Teresa Chen; Johannes de Boer
Journal:  Opt Express       Date:  2005-11-14       Impact factor: 3.894

7.  Optical coherence angiography.

Authors:  Shuichi Makita; Youngjoo Hong; Masahiro Yamanari; Toyohiko Yatagai; Yoshiaki Yasuno
Journal:  Opt Express       Date:  2006-08-21       Impact factor: 3.894

8.  Optical coherence tomography.

Authors:  D Huang; E A Swanson; C P Lin; J S Schuman; W G Stinson; W Chang; M R Hee; T Flotte; K Gregory; C A Puliafito
Journal:  Science       Date:  1991-11-22       Impact factor: 47.728

9.  Errors in retinal thickness measurements obtained by optical coherence tomography.

Authors:  Srinivas R Sadda; Ziqiang Wu; Alexander C Walsh; Len Richine; Jessica Dougall; Richard Cortez; Laurie D LaBree
Journal:  Ophthalmology       Date:  2006-01-10       Impact factor: 12.079

10.  Optical coherence tomography measurement of macular and nerve fiber layer thickness in normal and glaucomatous human eyes.

Authors:  Viviane Guedes; Joel S Schuman; Ellen Hertzmark; Gadi Wollstein; Anthony Correnti; Ronald Mancini; David Lederer; Serineh Voskanian; Leonardo Velazquez; Helena M Pakter; Tamar Pedut-Kloizman; James G Fujimoto; Cynthia Mattox
Journal:  Ophthalmology       Date:  2003-01       Impact factor: 12.079

  10 in total
  20 in total

1.  Improving image segmentation performance and quantitative analysis via a computer-aided grading methodology for optical coherence tomography retinal image analysis.

Authors:  Delia Cabrera Debuc; Harry M Salinas; Sudarshan Ranganathan; Erika Tátrai; Wei Gao; Meixiao Shen; Jianhua Wang; Gábor M Somfai; Carmen A Puliafito
Journal:  J Biomed Opt       Date:  2010 Jul-Aug       Impact factor: 3.170

Review 2.  State-of-the-art in retinal optical coherence tomography image analysis.

Authors:  Ahmadreza Baghaie; Zeyun Yu; Roshan M D'Souza
Journal:  Quant Imaging Med Surg       Date:  2015-08

Review 3.  Retinal imaging and image analysis.

Authors:  Michael D Abràmoff; Mona K Garvin; Milan Sonka
Journal:  IEEE Rev Biomed Eng       Date:  2010

4.  RefMoB, a Reflectivity Feature Model-Based Automated Method for Measuring Four Outer Retinal Hyperreflective Bands in Optical Coherence Tomography.

Authors:  Douglas H Ross; Mark E Clark; Pooja Godara; Carrie Huisingh; Gerald McGwin; Cynthia Owsley; Katie M Litts; Richard F Spaide; Kenneth R Sloan; Christine A Curcio
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-07       Impact factor: 4.799

5.  Novel window for cancer nanotheranostics: non-invasive ocular assessments of tumor growth and nanotherapeutic treatment efficacy in vivo.

Authors:  Mayank Goswami; Xinlei Wang; Pengfei Zhang; Wenwu Xiao; Sarah J Karlen; Yuanpei Li; Robert J Zawadzki; Marie E Burns; Kit S Lam; Edward N Pugh
Journal:  Biomed Opt Express       Date:  2018-12-11       Impact factor: 3.732

6.  Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map.

Authors:  Raheleh Kafieh; Hossein Rabbani; Michael D Abramoff; Milan Sonka
Journal:  Med Image Anal       Date:  2013-06-11       Impact factor: 8.545

7.  Imaging retinal nerve fiber bundles using optical coherence tomography with adaptive optics.

Authors:  Omer P Kocaoglu; Barry Cense; Ravi S Jonnal; Qiang Wang; Sangyeol Lee; Weihua Gao; Donald T Miller
Journal:  Vision Res       Date:  2011-06-22       Impact factor: 1.886

8.  Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology.

Authors:  Pratul P Srinivasan; Stephanie J Heflin; Joseph A Izatt; Vadim Y Arshavsky; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2014-01-07       Impact factor: 3.732

9.  Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images.

Authors:  Mona Kathryn Garvin; Michael David Abràmoff; Xiaodong Wu; Stephen R Russell; Trudy L Burns; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2009-03-10       Impact factor: 10.048

10.  Curvature correction of retinal OCTs using graph-based geometry detection.

Authors:  Raheleh Kafieh; Hossein Rabbani; Michael D Abramoff; Milan Sonka
Journal:  Phys Med Biol       Date:  2013-04-11       Impact factor: 3.609

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