Literature DB >> 35931872

Self-supervised patient-specific features learning for OCT image classification.

Leyuan Fang1, Jiahuan Guo1, Xingxin He2, Muxing Li3.   

Abstract

Deep learning's great success in image classification is heavily reliant on large-scale annotated datasets. However, obtaining labels for optical coherence tomography (OCT) data requires the significant effort of professional ophthalmologists, which hinders the application of deep learning in OCT image classification. In this paper, we propose a self-supervised patient-specific features learning (SSPSF) method to reduce the amount of data required for well OCT image classification results. Specifically, the SSPSF consists of a self-supervised learning phase and a downstream OCT image classification learning phase. The self-supervised learning phase contains two self-supervised patient-specific features learning tasks. One is to learn to discriminate an OCT scan which belongs to a specific patient. The other task is to learn the invariant features related to patients. In addition, our proposed self-supervised learning model can learn inherent representations from the OCT images without any manual labels, which provides well initialization parameters for the downstream OCT image classification model. The proposed SSPSF achieves classification accuracy of 97.74% and 98.94% on the public RETOUCH dataset and AI Challenger dataset, respectively. The experimental results on two public OCT datasets show the effectiveness of the proposed method compared with other well-known OCT image classification methods with less annotated data.
© 2022. International Federation for Medical and Biological Engineering.

Entities:  

Keywords:  Convolutional neural network (CNN); Image classification; Optical coherence tomography (OCT); Self-supervised learning

Mesh:

Year:  2022        PMID: 35931872     DOI: 10.1007/s11517-022-02627-8

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   3.079


  20 in total

1.  In vivo ultrahigh-resolution optical coherence tomography.

Authors:  W Drexler; U Morgner; F X Kärtner; C Pitris; S A Boppart; X D Li; E P Ippen; J G Fujimoto
Journal:  Opt Lett       Date:  1999-09-01       Impact factor: 3.776

2.  Fully automated detection of diabetic macular edema and dry age-related macular degeneration from optical coherence tomography images.

Authors:  Pratul P Srinivasan; Leo A Kim; Priyatham S Mettu; Scott W Cousins; Grant M Comer; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2014-09-12       Impact factor: 3.732

3.  Attention to Lesion: Lesion-Aware Convolutional Neural Network for Retinal Optical Coherence Tomography Image Classification.

Authors:  Leyuan Fang; Chong Wang; Shutao Li; Hossein Rabbani; Xiangdong Chen; Zhimin Liu
Journal:  IEEE Trans Med Imaging       Date:  2019-02-08       Impact factor: 10.048

4.  Surrogate-Assisted Retinal OCT Image Classification Based on Convolutional Neural Networks.

Authors:  Yibiao Rong; Dehui Xiang; Weifang Zhu; Kai Yu; Fei Shi; Zhun Fan; Xinjian Chen
Journal:  IEEE J Biomed Health Inform       Date:  2018-02-12       Impact factor: 5.772

5.  Automated macular pathology diagnosis in retinal OCT images using multi-scale spatial pyramid and local binary patterns in texture and shape encoding.

Authors:  Yu-Ying Liu; Mei Chen; Hiroshi Ishikawa; Gadi Wollstein; Joel S Schuman; James M Rehg
Journal:  Med Image Anal       Date:  2011-06-22       Impact factor: 8.545

6.  Segmentation Based Sparse Reconstruction of Optical Coherence Tomography Images.

Authors:  Leyuan Fang; Shutao Li; David Cunefare; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2016-09-20       Impact factor: 10.048

7.  Curvature correction of retinal OCTs using graph-based geometry detection.

Authors:  Raheleh Kafieh; Hossein Rabbani; Michael D Abramoff; Milan Sonka
Journal:  Phys Med Biol       Date:  2013-04-11       Impact factor: 3.609

8.  Deep learning is effective for the classification of OCT images of normal versus Age-related Macular Degeneration.

Authors:  Cecilia S Lee; Doug M Baughman; Aaron Y Lee
Journal:  Ophthalmol Retina       Date:  2017-02-13

9.  Classification of SD-OCT Volumes Using Local Binary Patterns: Experimental Validation for DME Detection.

Authors:  Guillaume Lemaître; Mojdeh Rastgoo; Joan Massich; Carol Y Cheung; Tien Y Wong; Ecosse Lamoureux; Dan Milea; Fabrice Mériaudeau; Désiré Sidibé
Journal:  J Ophthalmol       Date:  2016-07-31       Impact factor: 1.909

10.  Clinically applicable deep learning for diagnosis and referral in retinal disease.

Authors:  Jeffrey De Fauw; Joseph R Ledsam; Bernardino Romera-Paredes; Stanislav Nikolov; Nenad Tomasev; Sam Blackwell; Harry Askham; Xavier Glorot; Brendan O'Donoghue; Daniel Visentin; George van den Driessche; Balaji Lakshminarayanan; Clemens Meyer; Faith Mackinder; Simon Bouton; Kareem Ayoub; Reena Chopra; Dominic King; Alan Karthikesalingam; Cían O Hughes; Rosalind Raine; Julian Hughes; Dawn A Sim; Catherine Egan; Adnan Tufail; Hugh Montgomery; Demis Hassabis; Geraint Rees; Trevor Back; Peng T Khaw; Mustafa Suleyman; Julien Cornebise; Pearse A Keane; Olaf Ronneberger
Journal:  Nat Med       Date:  2018-08-13       Impact factor: 53.440

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