Literature DB >> 20363675

Three-dimensional analysis of retinal layer texture: identification of fluid-filled regions in SD-OCT of the macula.

Gwénolé Quellec1, Kyungmoo Lee, Martin Dolejsi, Mona K Garvin, Michael D Abràmoff, Milan Sonka.   

Abstract

Optical coherence tomography (OCT) is becoming one of the most important modalities for the noninvasive assessment of retinal eye diseases. As the number of acquired OCT volumes increases, automating the OCT image analysis is becoming increasingly relevant. In this paper, a method for automated characterization of the normal macular appearance in spectral domain OCT (SD-OCT) volumes is reported together with a general approach for local retinal abnormality detection. Ten intraretinal layers are first automatically segmented and the 3-D image dataset flattened to remove motion-based artifacts. From the flattened OCT data, 23 features are extracted in each layer locally to characterize texture and thickness properties across the macula. The normal ranges of layer-specific feature variations have been derived from 13 SD-OCT volumes depicting normal retinas. Abnormalities are then detected by classifying the local differences between the normal appearance and the retinal measures in question. This approach was applied to determine footprints of fluid-filled regions--SEADs (Symptomatic Exudate-Associated Derangements)--in 78 SD-OCT volumes from 23 repeatedly imaged patients with choroidal neovascularization (CNV), intra-, and sub-retinal fluid and pigment epithelial detachment. The automated SEAD footprint detection method was validated against an independent standard obtained using an interactive 3-D SEAD segmentation approach. An area under the receiver-operating characteristic curve of 0.961 +/- 0.012 was obtained for the classification of vertical, cross-layer, macular columns. A study performed on 12 pairs of OCT volumes obtained from the same eye on the same day shows that the repeatability of the automated method is comparable to that of the human experts. This work demonstrates that useful 3-D textural information can be extracted from SD-OCT scans and--together with an anatomical atlas of normal retinas--can be used for clinically important applications.

Entities:  

Mesh:

Year:  2010        PMID: 20363675      PMCID: PMC2911793          DOI: 10.1109/TMI.2010.2047023

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  35 in total

1.  Atlas-driven lung lobe segmentation in volumetric X-ray CT images.

Authors:  Li Zhang; Eric A Hoffman; Joseph M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2006-01       Impact factor: 10.048

2.  Delineating fluid-filled region boundaries in optical coherence tomography images of the retina.

Authors:  Delia Cabrera Fernández
Journal:  IEEE Trans Med Imaging       Date:  2005-08       Impact factor: 10.048

3.  Speckle reduction in optical coherence tomography images by use of a spatially adaptive wavelet filter.

Authors:  Desmond C Adler; Tony H Ko; James G Fujimoto
Journal:  Opt Lett       Date:  2004-12-15       Impact factor: 3.776

4.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

5.  Optical coherence tomography identification of occult choroidal neovascularization in age-related macular degeneration.

Authors:  Florence Coscas; Gabriel Coscas; Eric Souied; Sarah Tick; Gisele Soubrane
Journal:  Am J Ophthalmol       Date:  2007-08-15       Impact factor: 5.258

6.  Speckle noise reduction algorithm for optical coherence tomography based on interval type II fuzzy set.

Authors:  Prabakar Puvanathasan; Kostadinka Bizheva
Journal:  Opt Express       Date:  2007-11-26       Impact factor: 3.894

7.  Wavelet analysis enables system-independent texture analysis of optical coherence tomography images.

Authors:  Colleen A Lingley-Papadopoulos; Murray H Loew; Jason M Zara
Journal:  J Biomed Opt       Date:  2009 Jul-Aug       Impact factor: 3.170

Review 8.  State-of-the-art retinal optical coherence tomography.

Authors:  Wolfgang Drexler; James G Fujimoto
Journal:  Prog Retin Eye Res       Date:  2007-08-11       Impact factor: 21.198

9.  A variable-dosing regimen with intravitreal ranibizumab for neovascular age-related macular degeneration: year 2 of the PrONTO Study.

Authors:  Geeta A Lalwani; Philip J Rosenfeld; Anne E Fung; Sander R Dubovy; Stephen Michels; William Feuer; Janet L Davis; Harry W Flynn; Maria Esquiabro
Journal:  Am J Ophthalmol       Date:  2009-04-18       Impact factor: 5.258

10.  Selective loss of inner retinal layer thickness in type 1 diabetic patients with minimal diabetic retinopathy.

Authors:  Hille W van Dijk; Pauline H B Kok; Mona Garvin; Milan Sonka; J Hans Devries; Robert P J Michels; Mirjam E J van Velthoven; Reinier O Schlingemann; Frank D Verbraak; Michael D Abràmoff
Journal:  Invest Ophthalmol Vis Sci       Date:  2009-01-17       Impact factor: 4.799

View more
  57 in total

1.  Three-dimensional texture analysis of optical coherence tomography images of ovarian tissue.

Authors:  Travis W Sawyer; Swati Chandra; Photini F S Rice; Jennifer W Koevary; Jennifer K Barton
Journal:  Phys Med Biol       Date:  2018-12-04       Impact factor: 3.609

2.  2-D pattern of nerve fiber bundles in glaucoma emerging from spectral-domain optical coherence tomography.

Authors:  Mona K Garvin; Michael D Abràmoff; Kyungmoo Lee; Meindert Niemeijer; Milan Sonka; Young H Kwon
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-01-31       Impact factor: 4.799

3.  Automated segmentation of geographic atrophy in fundus autofluorescence images using supervised pixel classification.

Authors:  Zhihong Hu; Gerard G Medioni; Matthias Hernandez; Srinivas R Sadda
Journal:  J Med Imaging (Bellingham)       Date:  2015-01-12

Review 4.  Retinal imaging and image analysis.

Authors:  Michael D Abràmoff; Mona K Garvin; Milan Sonka
Journal:  IEEE Rev Biomed Eng       Date:  2010

5.  Reproducibility of SD-OCT-based ganglion cell-layer thickness in glaucoma using two different segmentation algorithms.

Authors:  Mona K Garvin; Kyungmoo Lee; Trudy L Burns; Michael D Abràmoff; Milan Sonka; Young H Kwon
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-10-25       Impact factor: 4.799

6.  Quantitative analysis of retinal layer optical intensities on three-dimensional optical coherence tomography.

Authors:  Xinjian Chen; Ping Hou; Chao Jin; Weifang Zhu; Xiaohong Luo; Fei Shi; Milan Sonka; Haoyu Chen
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-10-21       Impact factor: 4.799

7.  Kernel regression based segmentation of optical coherence tomography images with diabetic macular edema.

Authors:  Stephanie J Chiu; Michael J Allingham; Priyatham S Mettu; Scott W Cousins; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2015-03-09       Impact factor: 3.732

8.  Multi-surface and multi-field co-segmentation of 3-D retinal optical coherence tomography.

Authors:  Hrvoje Bogunovic; Milan Sonka; Young H Kwon; Pavlina Kemp; Michael D Abramoff; Xiaodong Wu
Journal:  IEEE Trans Med Imaging       Date:  2014-07-09       Impact factor: 10.048

9.  Relationships of retinal structure and humphrey 24-2 visual field thresholds in patients with glaucoma.

Authors:  Hrvoje Bogunović; Young H Kwon; Adnan Rashid; Kyungmoo Lee; Douglas B Critser; Mona K Garvin; Milan Sonka; Michael D Abràmoff
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-12-09       Impact factor: 4.799

10.  Stratified Sampling Voxel Classification for Segmentation of Intraretinal and Subretinal Fluid in Longitudinal Clinical OCT Data.

Authors:  Milan Sonka; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2015-03-06       Impact factor: 10.048

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.