Literature DB >> 23528737

The DHH1/RCKp54 family of helicases: an ancient family of proteins that promote translational silencing.

Vlad Presnyak1, Jeff Coller.   

Abstract

Translational control is a vital aspect of gene expression. Message specific translational repressors have been known for decades. Recent evidence, however, suggests that a general machinery exists that dampens the translational capacity of the majority of mRNAs. This activity has been best ascribed to a conserved family of RNA helicases called the DHH1/RCKp54 family. The function of these helicases is to promote translational silencing. By transitioning mRNA into quiescence, DHH1/RCKp54 helicases promote either mRNA destruction or storage. In this review we describe the known roles of these helicases and propose a mechanistic model to explain their mode of action. This article is part of a Special Issue entitled: The Biology of RNA helicases - Modulation for life.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23528737      PMCID: PMC3661697          DOI: 10.1016/j.bbagrm.2013.03.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  63 in total

1.  DDX6 recruits translational silenced human reticulocyte 15-lipoxygenase mRNA to RNP granules.

Authors:  Isabel S Naarmann; Christiane Harnisch; Gerhard Müller-Newen; Henning Urlaub; Antje Ostareck-Lederer; Dirk H Ostareck
Journal:  RNA       Date:  2010-09-30       Impact factor: 4.942

2.  Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures.

Authors:  Alex Michael Ward; Katell Bidet; Ang Yinglin; Siok Ghee Ler; Kelly Hogue; Walter Blackstock; Jayantha Gunaratne; Mariano A Garcia-Blanco
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

3.  Intermolecular interactions within the abundant DEAD-box protein Dhh1 regulate its activity in vivo.

Authors:  Arnob Dutta; Suting Zheng; Deepti Jain; Craig E Cameron; Joseph C Reese
Journal:  J Biol Chem       Date:  2011-06-03       Impact factor: 5.157

4.  Initiation of the yeast G0 program requires Igo1 and Igo2, which antagonize activation of decapping of specific nutrient-regulated mRNAs.

Authors:  Xuan Luo; Nicolas Talarek; Claudio De Virgilio
Journal:  RNA Biol       Date:  2011-01-01       Impact factor: 4.652

5.  The DExD/H box ATPase Dhh1 functions in translational repression, mRNA decay, and processing body dynamics.

Authors:  Johanna S Carroll; Sarah E Munchel; Karsten Weis
Journal:  J Cell Biol       Date:  2011-08-15       Impact factor: 10.539

6.  The DEAD-box RNA helicase DDX6 is required for efficient encapsidation of a retroviral genome.

Authors:  Shuyuarn F Yu; Phillip Lujan; Dana L Jackson; Michael Emerman; Maxine L Linial
Journal:  PLoS Pathog       Date:  2011-10-13       Impact factor: 6.823

7.  Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes.

Authors:  Sheona P Drummond; John Hildyard; Helena Firczuk; Onrapak Reamtong; Ning Li; Shichina Kannambath; Amy J Claydon; Robert J Beynon; Claire E Eyers; John E G McCarthy
Journal:  Nucleic Acids Res       Date:  2011-06-28       Impact factor: 16.971

8.  The RNA helicase Dhh1p cooperates with Rbp1p to promote porin mRNA decay via its non-conserved C-terminal domain.

Authors:  Lin-Chun Chang; Fang-Jen S Lee
Journal:  Nucleic Acids Res       Date:  2011-10-13       Impact factor: 16.971

9.  The DEAD-box protein Dhh1 promotes decapping by slowing ribosome movement.

Authors:  Thomas Sweet; Carrie Kovalak; Jeff Coller
Journal:  PLoS Biol       Date:  2012-06-12       Impact factor: 8.029

10.  HIV-1 Gag co-opts a cellular complex containing DDX6, a helicase that facilitates capsid assembly.

Authors:  Jonathan C Reed; Britta Molter; Clair D Geary; John McNevin; Julie McElrath; Samina Giri; Kevin C Klein; Jaisri R Lingappa
Journal:  J Cell Biol       Date:  2012-07-30       Impact factor: 10.539

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  34 in total

Review 1.  Towards a molecular understanding of microRNA-mediated gene silencing.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Nat Rev Genet       Date:  2015-06-16       Impact factor: 53.242

Review 2.  Emerging connections between RNA and autophagy.

Authors:  Lisa B Frankel; Michal Lubas; Anders H Lund
Journal:  Autophagy       Date:  2016-10-07       Impact factor: 16.016

3.  Translation control: Learning from viruses, again.

Authors:  Juana Díez; Jennifer Jungfleisch
Journal:  RNA Biol       Date:  2017-05-10       Impact factor: 4.652

Review 4.  On the edge of degradation: Autophagy regulation by RNA decay.

Authors:  Elizabeth Delorme-Axford; Daniel J Klionsky
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-12-17       Impact factor: 9.957

Review 5.  The multiple functions of RNA helicases as drivers and regulators of gene expression.

Authors:  Cyril F Bourgeois; Franck Mortreux; Didier Auboeuf
Journal:  Nat Rev Mol Cell Biol       Date:  2016-06-02       Impact factor: 94.444

Review 6.  Emerging relationship between RNA helicases and autophagy.

Authors:  Miao-Miao Zhao; Ru-Sha Wang; Yan-Lin Zhou; Zheng-Gang Yang
Journal:  J Zhejiang Univ Sci B       Date:  2020 Oct.       Impact factor: 3.066

7.  The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality.

Authors:  Aditya Radhakrishnan; Ying-Hsin Chen; Sophie Martin; Najwa Alhusaini; Rachel Green; Jeff Coller
Journal:  Cell       Date:  2016-09-15       Impact factor: 41.582

8.  Codon optimality is a major determinant of mRNA stability.

Authors:  Vladimir Presnyak; Najwa Alhusaini; Ying-Hsin Chen; Sophie Martin; Nathan Morris; Nicholas Kline; Sara Olson; David Weinberg; Kristian E Baker; Brenton R Graveley; Jeff Coller
Journal:  Cell       Date:  2015-03-12       Impact factor: 41.582

Review 9.  Transcriptional and post-transcriptional regulation of autophagy in the yeast Saccharomyces cerevisiae.

Authors:  Elizabeth Delorme-Axford; Daniel J Klionsky
Journal:  J Biol Chem       Date:  2018-01-25       Impact factor: 5.157

10.  Positive-sense RNA viruses reveal the complexity and dynamics of the cellular and viral epitranscriptomes during infection.

Authors:  Will McIntyre; Rachel Netzband; Gaston Bonenfant; Jason M Biegel; Clare Miller; Gabriele Fuchs; Eric Henderson; Manoj Arra; Mario Canki; Daniele Fabris; Cara T Pager
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

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