Literature DB >> 20884783

DDX6 recruits translational silenced human reticulocyte 15-lipoxygenase mRNA to RNP granules.

Isabel S Naarmann1, Christiane Harnisch, Gerhard Müller-Newen, Henning Urlaub, Antje Ostareck-Lederer, Dirk H Ostareck.   

Abstract

Erythroid precursor cells lose the capacity for mRNA synthesis due to exclusion of the nucleus during maturation. Therefore, the stability and translation of mRNAs that code for specific proteins, which function in late stages of maturation when reticulocytes become erythrocytes, are controlled tightly. Reticulocyte 15-lipoxygenase (r15-LOX) initiates the breakdown of mitochondria in mature reticulocytes. Through the temporal restriction of mRNA translation, the synthesis of r15-LOX is prevented in premature cells. The enzyme is synthesized only in mature reticulocytes, although r15-LOX mRNA is already present in erythroid precursor cells. Translation of r15-LOX mRNA is inhibited by hnRNP K and hnRNP E1, which bind to the differentiation control element (DICE) in its 3' untranslated region (3'UTR). The hnRNP K/E1-DICE complex interferes with the joining of the 60S ribosomal subunit to the 40S subunit at the AUG. We took advantage of the inducible human erythroid K562 cell system that fully recapitulates this process to identify so far unknown factors, which are critical for DICE-dependent translational regulation. Applying RNA chromatography with the DICE as bait combined with hnRNP K immunoprecipitation, we specifically purified the DEAD-box RNA helicase 6 (DDX6) that interacts with hnRNP K and hnRNP E1 in a DICE-dependent manner. Employing RNA interference and fluorescence in situ hybridization, we show that DDX6 colocalizes with endogenous human (h)r15-LOX mRNA to P-body-like RNP granules, from which 60S ribosomal subunits are excluded. Our data suggest that in premature erythroid cells translational silencing of hr15-LOX mRNA is maintained by DDX6 mediated storage in these RNP granules.

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Year:  2010        PMID: 20884783      PMCID: PMC2957058          DOI: 10.1261/rna.2211110

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  65 in total

1.  The lipoxygenase of reticulocytes. Purification, characterization and biological dynamics of the lipoxygenase; its identity with the respiratory inhibitors of the reticulocyte.

Authors:  S M Rapoport; T Schewe; R Wiesner; W Halangk; P Ludwig; M Janicke-Höhne; C Tannert; C Hiebsch; D Klatt
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2.  Binding and release of eukaryotic initiation factor eIF-2 and GTP during protein synthesis initiation.

Authors:  H Trachsel; T Staehelin
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

3.  A competitive inhibitor of the GTP reaction in protein synthesis.

Authors:  J W Hershey; R E Monro
Journal:  J Mol Biol       Date:  1966-06       Impact factor: 5.469

4.  The mechanism by which cycloheximide and related glutarimide antibiotics inhibit peptide synthesis on reticulocyte ribosomes.

Authors:  T G Obrig; W J Culp; W L McKeehan; B Hardesty
Journal:  J Biol Chem       Date:  1971-01-10       Impact factor: 5.157

5.  The mechanism of action of protein synthesis initiation factors from rabbit reticulocytes.

Authors:  R Benne; J W Hershey
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

6.  Release of eIF6 (p27BBP) from the 60S subunit allows 80S ribosome assembly.

Authors:  Marcello Ceci; Cristina Gaviraghi; Chiara Gorrini; Leonardo A Sala; Nina Offenhäuser; Pier Carlo Marchisio; Stefano Biffo
Journal:  Nature       Date:  2003-12-04       Impact factor: 49.962

7.  Visualization of RNA-protein interactions in living cells: FMRP and IMP1 interact on mRNAs.

Authors:  Oliver Rackham; Chris M Brown
Journal:  EMBO J       Date:  2004-07-29       Impact factor: 11.598

8.  c-Src-mediated phosphorylation of hnRNP K drives translational activation of specifically silenced mRNAs.

Authors:  Antje Ostareck-Lederer; Dirk H Ostareck; Christophe Cans; Gitte Neubauer; Karol Bomsztyk; Giulio Superti-Furga; Matthias W Hentze
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

9.  The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci.

Authors:  Dierk Ingelfinger; Donna J Arndt-Jovin; Reinhard Lührmann; Tilmann Achsel
Journal:  RNA       Date:  2002-12       Impact factor: 4.942

10.  Cytoplasmic foci are sites of mRNA decay in human cells.

Authors:  Nicolas Cougot; Sylvie Babajko; Bertrand Séraphin
Journal:  J Cell Biol       Date:  2004-04-05       Impact factor: 10.539

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  21 in total

Review 1.  Translational control in cellular and developmental processes.

Authors:  Jian Kong; Paul Lasko
Journal:  Nat Rev Genet       Date:  2012-06       Impact factor: 53.242

2.  Identification of DEAD-box RNA helicase 6 (DDX6) as a cellular modulator of vascular endothelial growth factor expression under hypoxia.

Authors:  Sebastian de Vries; Isabel S Naarmann-de Vries; Henning Urlaub; Hongqi Lue; Jürgen Bernhagen; Dirk H Ostareck; Antje Ostareck-Lederer
Journal:  J Biol Chem       Date:  2013-01-04       Impact factor: 5.157

3.  Makorin ring zinc finger protein 1 (MKRN1), a novel poly(A)-binding protein-interacting protein, stimulates translation in nerve cells.

Authors:  Hatmone Miroci; Claudia Schob; Stefan Kindler; Janin Ölschläger-Schütt; Susanne Fehr; Tassilo Jungenitz; Stephan W Schwarzacher; Claudia Bagni; Evita Mohr
Journal:  J Biol Chem       Date:  2011-11-29       Impact factor: 5.157

4.  Expanded CUG repeats Dysregulate RNA splicing by altering the stoichiometry of the muscleblind 1 complex.

Authors:  Sharan Paul; Warunee Dansithong; Sonali P Jog; Ian Holt; Saloni Mittal; J David Brook; Glenn E Morris; Lucio Comai; Sita Reddy
Journal:  J Biol Chem       Date:  2011-09-07       Impact factor: 5.157

5.  Transcriptional regulation of heterogeneous nuclear ribonucleoprotein K gene expression.

Authors:  Liqing He; Xiaochang Xue; Zhengjun Wang; Entai Hou; Yong Liu; Mingyu Liang; Yingqi Zhang; Zhongmin Tian
Journal:  Biochimie       Date:  2014-12-10       Impact factor: 4.079

Review 6.  The DHH1/RCKp54 family of helicases: an ancient family of proteins that promote translational silencing.

Authors:  Vlad Presnyak; Jeff Coller
Journal:  Biochim Biophys Acta       Date:  2013-03-23

7.  miR-155 targets Caspase-3 mRNA in activated macrophages.

Authors:  Rebecca De Santis; Anke Liepelt; Jana C Mossanen; Anne Dueck; Nadine Simons; Antje Mohs; Christian Trautwein; Gunter Meister; Gernot Marx; Antje Ostareck-Lederer; Dirk H Ostareck
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

8.  DDX3 Modulates Neurite Development via Translationally Activating an RNA Regulon Involved in Rac1 Activation.

Authors:  Hung-Hsi Chen; Hsin-I Yu; Woan-Yuh Tarn
Journal:  J Neurosci       Date:  2016-09-21       Impact factor: 6.167

9.  DDX6 localizes to nuage structures and the annulus of mammalian spermatogenic cells.

Authors:  Chika Kawahara; Sadaki Yokota; Hideaki Fujita
Journal:  Histochem Cell Biol       Date:  2013-10-20       Impact factor: 4.304

10.  Identification of RNA-binding Proteins in Macrophages by Interactome Capture.

Authors:  Anke Liepelt; Isabel S Naarmann-de Vries; Nadine Simons; Katrin Eichelbaum; Sophia Föhr; Stuart K Archer; Alfredo Castello; Björn Usadel; Jeroen Krijgsveld; Thomas Preiss; Gernot Marx; Matthias W Hentze; Dirk H Ostareck; Antje Ostareck-Lederer
Journal:  Mol Cell Proteomics       Date:  2016-06-08       Impact factor: 5.911

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