Literature DB >> 26077373

Towards a molecular understanding of microRNA-mediated gene silencing.

Stefanie Jonas1, Elisa Izaurralde1.   

Abstract

MicroRNAs (miRNAs) are a conserved class of small non-coding RNAs that assemble with Argonaute proteins into miRNA-induced silencing complexes (miRISCs) to direct post-transcriptional silencing of complementary mRNA targets. Silencing is accomplished through a combination of translational repression and mRNA destabilization, with the latter contributing to most of the steady-state repression in animal cell cultures. Degradation of the mRNA target is initiated by deadenylation, which is followed by decapping and 5'-to-3' exonucleolytic decay. Recent work has enhanced our understanding of the mechanisms of silencing, making it possible to describe in molecular terms a continuum of direct interactions from miRNA target recognition to mRNA deadenylation, decapping and 5'-to-3' degradation. Furthermore, an intricate interplay between translational repression and mRNA degradation is emerging.

Mesh:

Substances:

Year:  2015        PMID: 26077373     DOI: 10.1038/nrg3965

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  114 in total

1.  P-body formation is a consequence, not the cause, of RNA-mediated gene silencing.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Daniel Schweizer; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

2.  Structural basis for the mutually exclusive anchoring of P body components EDC3 and Tral to the DEAD box protein DDX6/Me31B.

Authors:  Felix Tritschler; Joerg E Braun; Ana Eulalio; Vincent Truffault; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Mol Cell       Date:  2009-03-13       Impact factor: 17.970

3.  The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.

Authors:  Ingmar B Schäfer; Michaela Rode; Fabien Bonneau; Steffen Schüssler; Elena Conti
Journal:  Nat Struct Mol Biol       Date:  2014-06-01       Impact factor: 15.369

4.  PABP and the poly(A) tail augment microRNA repression by facilitated miRISC binding.

Authors:  Francesca Moretti; Constanze Kaiser; Agnieszka Zdanowicz-Specht; Matthias W Hentze
Journal:  Nat Struct Mol Biol       Date:  2012-05-27       Impact factor: 15.369

5.  Kinetic analysis reveals successive steps leading to miRNA-mediated silencing in mammalian cells.

Authors:  Julien Béthune; Caroline G Artus-Revel; Witold Filipowicz
Journal:  EMBO Rep       Date:  2012-06-08       Impact factor: 8.807

6.  Structural features of Argonaute-GW182 protein interactions.

Authors:  Janina Pfaff; Janosch Hennig; Franz Herzog; Ruedi Aebersold; Michael Sattler; Dierk Niessing; Gunter Meister
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

7.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

8.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

Review 9.  From guide to target: molecular insights into eukaryotic RNA-interference machinery.

Authors:  Jonathan J Ipsaro; Leemor Joshua-Tor
Journal:  Nat Struct Mol Biol       Date:  2015-01       Impact factor: 15.369

Review 10.  The role of disordered protein regions in the assembly of decapping complexes and RNP granules.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Genes Dev       Date:  2013-12-15       Impact factor: 11.361

View more
  665 in total

Review 1.  A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome.

Authors:  Bastian Fromm; Tyler Billipp; Liam E Peck; Morten Johansen; James E Tarver; Benjamin L King; James M Newcomb; Lorenzo F Sempere; Kjersti Flatmark; Eivind Hovig; Kevin J Peterson
Journal:  Annu Rev Genet       Date:  2015-10-14       Impact factor: 16.830

Review 2.  Intersections of post-transcriptional gene regulatory mechanisms with intermediary metabolism.

Authors:  Waqar Arif; Gandhar Datar; Auinash Kalsotra
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-11       Impact factor: 4.490

Review 3.  The roles of microRNAs in mouse development.

Authors:  Brian DeVeale; Jennifer Swindlehurst-Chan; Robert Blelloch
Journal:  Nat Rev Genet       Date:  2021-01-15       Impact factor: 53.242

Review 4.  Non-coding RNAs in hepatocellular carcinoma: molecular functions and pathological implications.

Authors:  Chun-Ming Wong; Felice Ho-Ching Tsang; Irene Oi-Lin Ng
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2018-01-10       Impact factor: 46.802

5.  Opposing roles of miR-294 and MBNL1/2 in shaping the gene regulatory network of embryonic stem cells.

Authors:  Da-Ren Wu; Kai-Li Gu; Jian-Cheng Yu; Xing Fu; Xi-Wen Wang; Wen-Ting Guo; Le-Qi Liao; Hong Zhu; Xiao-Shan Zhang; Jingyi Hui; Yangming Wang
Journal:  EMBO Rep       Date:  2018-05-07       Impact factor: 8.807

6.  miR-339 Promotes Development of Stem Cell Leukemia/Lymphoma Syndrome via Downregulation of the BCL2L11 and BAX Proapoptotic Genes.

Authors:  Tianxiang Hu; Yating Chong; Sumin Lu; Rebecca Wang; Haiyan Qin; Jeane Silva; Eiko Kitamura; Chang-Sheng Chang; LesleyAnn Hawthorn; John K Cowell
Journal:  Cancer Res       Date:  2018-05-07       Impact factor: 12.701

7.  MicroRNA-138 attenuates epithelial-to-mesenchymal transition by targeting SOX4 in clear cell renal cell carcinoma.

Authors:  Feng Liu; Linfeng Wu; Anping Wang; Yajun Xu; Xiaodong Luo; Xing Liu; Yi Hua; Deying Zhang; Shengde Wu; Tao Lin; Dawei He; Guanghui Wei; Shanwen Chen
Journal:  Am J Transl Res       Date:  2017-08-15       Impact factor: 4.060

8.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

9.  miR-634 exhibits anti-tumor activities toward hepatocellular carcinoma via Rab1A and DHX33.

Authors:  Chris Zhiyi Zhang; Yun Cao; Jia Fu; Jing-Ping Yun; Mei-Fang Zhang
Journal:  Mol Oncol       Date:  2016-09-20       Impact factor: 6.603

10.  Magnaporthe oryzae Induces the Expression of a MicroRNA to Suppress the Immune Response in Rice.

Authors:  Xin Zhang; Yalin Bao; Deqi Shan; Zhihui Wang; Xiaoning Song; Zhaoyun Wang; Jiansheng Wang; Liqiang He; Liang Wu; Zhengguang Zhang; Dongdong Niu; Hailing Jin; Hongwei Zhao
Journal:  Plant Physiol       Date:  2018-03-16       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.