Literature DB >> 23480663

The genetic composition of populations of cynomolgus macaques (Macaca fascicularis) used in biomedical research.

S Kanthaswamy1, J Ng, J Satkoski Trask, D A George, A J Kou, L N Hoffman, T B Doherty, P Houghton, D G Smith.   

Abstract

BACKGROUND: The genetic composition of cynomolgus macaques used in biomedical research is not as well-characterized as that of rhesus macaques.
METHODS: Populations of cynomolgus macaques from Sumatra, Corregidor, Mauritius, Singapore, Cambodia, and Zamboanga were analyzed using 24 STRs.
RESULTS: The Sumatran and Cambodian populations exhibited the highest allelic diversity, while the Mauritian population exhibited the lowest. Sumatran cynomolgus macaques were the most genetically similar to all others, consistent with an Indonesian origin of the species. The high diversity among Cambodian animals may result from interbreeding with rhesus macaques. The Philippine and Mauritian samples were the most divergent from other populations, the former due to separation from the Sunda Shelf by deepwater and the latter due to anthropogenic translocation and extreme founder effects.
CONCLUSIONS: Investigators should verify their research subjects' origin, ancestry, and pedigree to minimize risks to biomedical experimentation from genetic variance stemming from close kinship and mixed ancestry as these can obscure treatment effects.
© 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Mesh:

Year:  2013        PMID: 23480663      PMCID: PMC3651788          DOI: 10.1111/jmp.12043

Source DB:  PubMed          Journal:  J Med Primatol        ISSN: 0047-2565            Impact factor:   0.667


  34 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  An estimator for pairwise relatedness using molecular markers.

Authors:  Jinliang Wang
Journal:  Genetics       Date:  2002-03       Impact factor: 4.562

Review 3.  Demands for rhesus monkeys in biomedical research: a workshop report.

Authors: 
Journal:  ILAR J       Date:  2003

4.  Comparative phylogenetics offer new insights into the biogeographic history of Macaca fascicularis and the origin of the Mauritian macaques.

Authors:  Anthony J Tosi; Cathryn S Coke
Journal:  Mol Phylogenet Evol       Date:  2006-08-11       Impact factor: 4.286

5.  Mitochondrial DNA diversity among three subpopulations of cynomolgus macaques (Macaca fascicularis) originating from the Indochinese region.

Authors:  Takashi Shiina; Keiko Tanaka; Yoshihiko Katsuyama; Kouji Otabe; Kengo Sakamoto; Masaaki Kurata; Mamoru Nomura; Hisashi Yamanaka; Hiroshi Nakagawa; Hidetoshi Inoko; Masao Ota
Journal:  Exp Anim       Date:  2010

6.  Genetic diversity of longtail macaques (Macaca fascicularis) on the island of Mauritius: an assessment of nuclear and mitochondrial DNA polymorphisms.

Authors:  Y Kawamoto; S Kawamoto; K Matsubayashi; K Nozawa; T Watanabe; M-A Stanley; D Perwitasari-Farajallah
Journal:  J Med Primatol       Date:  2008-02       Impact factor: 0.667

7.  adegenet: a R package for the multivariate analysis of genetic markers.

Authors:  Thibaut Jombart
Journal:  Bioinformatics       Date:  2008-04-08       Impact factor: 6.937

8.  Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

Authors:  S Kanthaswamy; J P Capitanio; C J Dubay; B Ferguson; T Folks; J C Ha; C E Hotchkiss; Z P Johnson; M G Katze; L S Kean; H Michael Kubisch; S Lank; L A Lyons; G M Miller; J Nylander; D H O'Connor; R E Palermo; D G Smith; E J Vallender; R W Wiseman; J Rogers
Journal:  J Med Primatol       Date:  2009-10       Impact factor: 0.667

9.  Detecting signatures of inter-regional and inter-specific hybridization among the Chinese rhesus macaque specific pathogen-free (SPF) population using single nucleotide polymorphic (SNP) markers.

Authors:  Sree Kanthaswamy; Jessica Satkoski; Alex Kou; Venkat Malladi; David Glenn Smith
Journal:  J Med Primatol       Date:  2010-08       Impact factor: 0.667

10.  Discriminant analysis of principal components: a new method for the analysis of genetically structured populations.

Authors:  Thibaut Jombart; Sébastien Devillard; François Balloux
Journal:  BMC Genet       Date:  2010-10-15       Impact factor: 2.797

View more
  29 in total

1.  Orbitofrontal Neuroadaptations and Cross-Species Synaptic Biomarkers in Heavy-Drinking Macaques.

Authors:  Sudarat Nimitvilai; Joachim D Uys; John J Woodward; Patrick K Randall; Lauren E Ball; Robert W Williams; Byron C Jones; Lu Lu; Kathleen A Grant; Patrick J Mulholland
Journal:  J Neurosci       Date:  2017-03-07       Impact factor: 6.167

2.  Rhesus Macaques Are More Susceptible to Progressive Tuberculosis than Cynomolgus Macaques: a Quantitative Comparison.

Authors:  Philana Ling Lin; Charles A Scanga; JoAnne L Flynn; Pauline Maiello; Robert M DiFazio; Anthony M Cadena; Mark A Rodgers
Journal:  Infect Immun       Date:  2018-01-22       Impact factor: 3.441

Review 3.  Genomic Tools for the Use of Nonhuman Primates in Translational Research.

Authors:  John D Harding
Journal:  ILAR J       Date:  2017-07-01

4.  Use of genome-wide heterospecific single-nucleotide polymorphisms to estimate linkage disequilibrium in rhesus and cynomolgus macaques.

Authors:  Jillian Ng; Jessica Satkoski Trask; Paul Houghton; David G Smith; Sree Kanthaswamy
Journal:  Comp Med       Date:  2015-02       Impact factor: 0.982

5.  Population Structure of Macaca fascicularis aurea, and their Genetic Relationships with M. f. fascicularis and M. mulatta Determined by 868 RADseq-Derived Autosomal SNPs-A consideration for biomedical research.

Authors:  Poompat Phadphon; Sree Kanthaswamy; Robert F Oldt; Yuzuru Hamada; Suchinda Malaivijitnond
Journal:  J Med Primatol       Date:  2021-11-26       Impact factor: 0.667

6.  A genetic comparison of two alleged subspecies of Philippine cynomolgus macaques.

Authors:  David Glenn Smith; Jillian Ng; Debra George; Jessica Satkoski Trask; Paul Houghton; Balbir Singh; Jason Villano; Sreetharan Kanthaswamy
Journal:  Am J Phys Anthropol       Date:  2014-06-30       Impact factor: 2.868

7.  DNA-based Determination of Ancestry in Cynomolgus Macaques (Macaca fascicularis).

Authors:  George Q Day; Jillian Ng; Robert F Oldt; Paul W Houghton; David Glenn Smith; Sree Kanthaswamy
Journal:  J Am Assoc Lab Anim Sci       Date:  2018-08-30       Impact factor: 1.232

8.  Preexisting Simian Immunodeficiency Virus Infection Increases Susceptibility to Tuberculosis in Mauritian Cynomolgus Macaques.

Authors:  Mark A Rodgers; Cassaundra Ameel; Amy L Ellis-Connell; Alexis J Balgeman; Pauline Maiello; Gabrielle L Barry; Thomas C Friedrich; Edwin Klein; Shelby L O'Connor; Charles A Scanga
Journal:  Infect Immun       Date:  2018-11-20       Impact factor: 3.441

9.  Quantitative and qualitative iNKT repertoire associations with disease susceptibility and outcome in macaque tuberculosis infection.

Authors:  Andrew Chancellor; Andrew White; Anna S Tocheva; Joe R Fenn; Mike Dennis; Liku Tezera; Akul Singhania; Tim Elliott; Marc Tebruegge; Paul Elkington; Stephan Gadola; Sally Sharpe; Salah Mansour
Journal:  Tuberculosis (Edinb)       Date:  2017-04-28       Impact factor: 3.131

10.  Comparative reactivity of human IgE to cynomolgus monkey and human effector cells and effects on IgE effector cell potency.

Authors:  Louise Saul; Debra H Josephs; Keith Cutler; Andrew Bradwell; Panagiotis Karagiannis; Chris Selkirk; Hannah J Gould; Paul Jones; James F Spicer; Sophia N Karagiannis
Journal:  MAbs       Date:  2014-01-14       Impact factor: 5.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.