Literature DB >> 19863674

Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

S Kanthaswamy1, J P Capitanio, C J Dubay, B Ferguson, T Folks, J C Ha, C E Hotchkiss, Z P Johnson, M G Katze, L S Kean, H Michael Kubisch, S Lank, L A Lyons, G M Miller, J Nylander, D H O'Connor, R E Palermo, D G Smith, E J Vallender, R W Wiseman, J Rogers.   

Abstract

The National Primate Research Centers (NPRCs) established Working Groups (WGs) for developing resources and mechanisms to facilitate collaborations among non-human primate (NHP) researchers. Here we report the progress of the Genome Banking and the Genetics and Genomics WGs in developing resources to advance the exchange, analysis and comparison of NHP genetic and genomic data across the NPRCs. The Genome Banking WG has established a National NHP DNA bank comprising 1250 DNA samples from unrelated animals and family trios from the 10 NHP species housed within the NPRC system. The Genetics and Genomics WG is developing SNP arrays that will provide a uniform, highly informative, efficient and low-cost method for rhesus and long-tailed macaque genotyping across the eight NPRCs. This WG is also establishing a Biomedical Informatics Research Network-based portal for shared bioinformatics resources including vital statistics, genotype and population data and information on the National NHP DNA bank.

Entities:  

Mesh:

Year:  2009        PMID: 19863674     DOI: 10.1111/j.1600-0684.2009.00371.x

Source DB:  PubMed          Journal:  J Med Primatol        ISSN: 0047-2565            Impact factor:   0.667


  15 in total

1.  SNP-based genetic characterization of the Tulane National Primate Research Center's conventional and specific pathogen-free rhesus macaque (Macaca mulatta) populations.

Authors:  Sree Kanthaswamy; Jillian Ng; Robert F Oldt; Kathrine Phillippi-Falkenstein; H Michael Kubisch
Journal:  J Med Primatol       Date:  2017-06-21       Impact factor: 0.667

2.  Animal models in today's translational medicine world.

Authors:  Abhishek Choudhary; Jamal A Ibdah
Journal:  Mo Med       Date:  2013 May-Jun

3.  Progress in genetics and genomics of nonhuman primates. Introduction.

Authors:  John D Harding
Journal:  ILAR J       Date:  2013

4.  Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta).

Authors:  Sree Kanthaswamy; Zachary Johnson; Jessica Satkoski Trask; David G Smith; Ranjani Ramakrishnan; Jason Bahk; Jillian Ng; Roger Wiseman; H Michael Kubisch; Eric J Vallender; Jeffrey Rogers; Betsy Ferguson
Journal:  Am J Primatol       Date:  2014-06-20       Impact factor: 2.371

Review 5.  Old world monkeys and new age science: the evolution of nonhuman primate systems virology.

Authors:  Robert E Palermo; Jennifer Tisoncik-Go; Marcus J Korth; Michael G Katze
Journal:  ILAR J       Date:  2013

6.  Peptide-binding motifs associated with MHC molecules common in Chinese rhesus macaques are analogous to those of human HLA supertypes and include HLA-B27-like alleles.

Authors:  Bianca R Mothé; Scott Southwood; John Sidney; A Michelle English; Amanda Wriston; Ilka Hoof; Jeffrey Shabanowitz; Donald F Hunt; Alessandro Sette
Journal:  Immunogenetics       Date:  2013-02-17       Impact factor: 2.846

7.  Detecting signatures of inter-regional and inter-specific hybridization among the Chinese rhesus macaque specific pathogen-free (SPF) population using single nucleotide polymorphic (SNP) markers.

Authors:  Sree Kanthaswamy; Jessica Satkoski; Alex Kou; Venkat Malladi; David Glenn Smith
Journal:  J Med Primatol       Date:  2010-08       Impact factor: 0.667

8.  4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta).

Authors:  J Satkoski Trask; W T Garnica; S Kanthaswamy; R S Malhi; D G Smith
Journal:  Genomics       Date:  2011-08-31       Impact factor: 5.736

9.  The genetic composition of populations of cynomolgus macaques (Macaca fascicularis) used in biomedical research.

Authors:  S Kanthaswamy; J Ng; J Satkoski Trask; D A George; A J Kou; L N Hoffman; T B Doherty; P Houghton; D G Smith
Journal:  J Med Primatol       Date:  2013-03-11       Impact factor: 0.667

10.  Genome resource banking of biomedically important laboratory animals.

Authors:  Yuksel Agca
Journal:  Theriogenology       Date:  2012-09-13       Impact factor: 2.740

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