Literature DB >> 23479627

Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.

Sung Chang Lee1, Brad C Bennett, Wen-Xu Hong, Yu Fu, Kent A Baker, Julien Marcoux, Carol V Robinson, Andrew B Ward, James R Halpert, Raymond C Stevens, Charles David Stout, Mark J Yeager, Qinghai Zhang.   

Abstract

Amphiphile selection is a critical step for structural studies of membrane proteins (MPs). We have developed a family of steroid-based facial amphiphiles (FAs) that are structurally distinct from conventional detergents and previously developed FAs. The unique FAs stabilize MPs and form relatively small protein-detergent complexes (PDCs), a property considered favorable for MP crystallization. We attempted to crystallize several MPs belonging to different protein families, including the human gap junction channel protein connexin 26, the ATP binding cassette transporter MsbA, the seven-transmembrane G protein-coupled receptor-like bacteriorhodopsin, and cytochrome P450s (peripheral MPs). Using FAs alone or mixed with other detergents or lipids, we obtained 3D crystals of the above proteins suitable for X-ray crystallographic analysis. The fact that FAs enhance MP crystallizability compared with traditional detergents can be attributed to several properties, including increased protein stability, formation of small PDCs, decreased PDC surface flexibility, and potential to mediate crystal lattice contacts.

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Year:  2013        PMID: 23479627      PMCID: PMC3612649          DOI: 10.1073/pnas.1221442110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

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2.  Bicelle crystallization: a new method for crystallizing membrane proteins yields a monomeric bacteriorhodopsin structure.

Authors:  Salem Faham; James U Bowie
Journal:  J Mol Biol       Date:  2002-02-08       Impact factor: 5.469

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Journal:  Nat Biotechnol       Date:  2003-01-13       Impact factor: 54.908

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Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-24       Impact factor: 11.205

6.  Lipidic cubic phases: a novel concept for the crystallization of membrane proteins.

Authors:  E M Landau; J P Rosenbusch
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-10       Impact factor: 11.205

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9.  Electron crystallography reveals the structure of metarhodopsin I.

Authors:  Jonathan J Ruprecht; Thorsten Mielke; Reiner Vogel; Claudio Villa; Gebhard F X Schertler
Journal:  EMBO J       Date:  2004-08-26       Impact factor: 11.598

Review 10.  ATP-binding cassette transporters in bacteria.

Authors:  Amy L Davidson; Jue Chen
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

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  58 in total

1.  Self-Assembly Behaviors of a Penta-Phenylene Maltoside and Its Application for Membrane Protein Study.

Authors:  Muhammad Ehsan; Ashwani Kumar; Jonas S Mortensen; Yang Du; Parameswaran Hariharan; Kaavya K Kumar; Betty Ha; Bernadette Byrne; Lan Guan; Brian K Kobilka; Claus J Loland; Pil Seok Chae
Journal:  Chem Asian J       Date:  2019-04-10

2.  Structural Insights into the Lipid A Transport Pathway in MsbA.

Authors:  Pius S Padayatti; Sung Chang Lee; Robyn L Stanfield; Po-Chao Wen; Emad Tajkhorshid; Ian A Wilson; Qinghai Zhang
Journal:  Structure       Date:  2019-05-23       Impact factor: 5.006

3.  Distinct conformational spectrum of homologous multidrug ABC transporters.

Authors:  Arne Moeller; Sung Chang Lee; Houchao Tao; Jeffrey A Speir; Geoffrey Chang; Ina L Urbatsch; Clinton S Potter; Bridget Carragher; Qinghai Zhang
Journal:  Structure       Date:  2015-02-05       Impact factor: 5.006

4.  Membrane protein stability can be compromised by detergent interactions with the extramembranous soluble domains.

Authors:  Zhengrong Yang; Chi Wang; Qingxian Zhou; Jianli An; Ellen Hildebrandt; Luba A Aleksandrov; John C Kappes; Lawrence J DeLucas; John R Riordan; Ina L Urbatsch; John F Hunt; Christie G Brouillette
Journal:  Protein Sci       Date:  2014-05-03       Impact factor: 6.725

5.  A delocalized proton-binding site within a membrane protein.

Authors:  Steffen Wolf; Erik Freier; Klaus Gerwert
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

6.  Dodecyl maltopyranoside enabled purification of active human GABA type A receptors for deep and direct proteomic sequencing.

Authors:  Xi Zhang; Keith W Miller
Journal:  Mol Cell Proteomics       Date:  2014-12-03       Impact factor: 5.911

Review 7.  Methodological advances: the unsung heroes of the GPCR structural revolution.

Authors:  Eshan Ghosh; Punita Kumari; Deepika Jaiman; Arun K Shukla
Journal:  Nat Rev Mol Cell Biol       Date:  2015-01-15       Impact factor: 94.444

Review 8.  New approaches towards the understanding of integral membrane proteins: A structural perspective on G protein-coupled receptors.

Authors:  Reinhard Grisshammer
Journal:  Protein Sci       Date:  2017-06-07       Impact factor: 6.725

9.  Rationally Engineered Tandem Facial Amphiphiles for Improved Membrane Protein Stabilization Efficacy.

Authors:  Manabendra Das; Yang Du; Jonas S Mortensen; Parameswaran Hariharan; Hyun Sung Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Pil Seok Chae
Journal:  Chembiochem       Date:  2018-09-21       Impact factor: 3.164

10.  Structure of Cytochrome P450 2C9*2 in Complex with Losartan: Insights into the Effect of Genetic Polymorphism.

Authors:  Sonia J Parikh; Chiara M Evans; Juliet O Obi; Qinghai Zhang; Keiko Maekawa; Karen C Glass; Manish B Shah
Journal:  Mol Pharmacol       Date:  2020-09-16       Impact factor: 4.436

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