Literature DB >> 23473503

MicroRNAs as a selective channel of communication between competing RNAs: a steady-state theory.

Matteo Figliuzzi1, Enzo Marinari, Andrea De Martino.   

Abstract

It has recently been suggested that the competition for a finite pool of microRNAs (miRNA) gives rise to effective interactions among their common targets (competing endogenous RNAs or ceRNAs) that could prove to be crucial for posttranscriptional regulation. We have studied a minimal model of posttranscriptional regulation where the emergence and the nature of such interactions can be characterized in detail at steady state. Sensitivity analysis shows that binding free energies and repression mechanisms are the key ingredients for the cross-talk between ceRNAs to arise. Interactions emerge in specific ranges of repression values, can be symmetrical (one ceRNA influences another and vice versa) or asymmetrical (one ceRNA influences another but not the reverse), and may be highly selective, while possibly limited by noise. In addition, we show that nontrivial correlations among ceRNAs can emerge in experimental readouts due to transcriptional fluctuations even in the absence of miRNA-mediated cross-talk.
Copyright © 2013 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23473503      PMCID: PMC3870798          DOI: 10.1016/j.bpj.2013.01.012

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

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  64 in total

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Review 5.  Identification and consequences of miRNA-target interactions--beyond repression of gene expression.

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Review 6.  Endogenous microRNA sponges: evidence and controversy.

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