| Literature DB >> 23431371 |
Yu-Xiang Zhang1, Yan Liu, Jing Dong, You-Xin Wang, Jing Wang, Guo-Qing Zhuang, Shu-Jing Han, Qing-Qing Guo, Yan-Xia Luo, Jie Zhang, Xiao-Xia Peng, Ling Zhang, Yu-Xiang Yan, Xing-Hua Yang, Hong Wang, Xu Han, Guang-Xu Liu, You-Hou Kang, You-Qin Liu, Sheng-Feng Weng, Hong Zhang, Xiao-Qiang Zhang, Ke-Bao Jia, Li Wang, Lei Zhao, Zhong-Xin Xiao, Shu-Hua Zhang, Hui-Hui Wu, Qing-Xuan Lai, Na Qi, Wei Wang, Herbert Gaisano, Fen Liu, Yan He.
Abstract
Since the KCNB1 encoding Kv2.1 channel accounts for the majority of Kv currents modulating insulin secretion by pancreatic islet beta-cells, we postulated that KCNB1 is a plausible candidate gene for genetic variation contributing to the variable compensatory secretory function of beta-cells in type-2 diabetes (T2D). We conducted two studies, a case-control study and a cross-section study, to investigate the association of common single-nucleotide polymorphisms (SNPs) in KCNB1 with T2D and its linking traits. In the case-control study, we first examined the association of 20 tag SNPs of KCNB1 with T2D in a population with 226 T2D patients and non-diabetic subjects (screening study). We then identified the association in an enlarged population of 412 T2D patients and non-diabetic subjects (replication study). In the cross-sectional study, we investigated the linkage between the candidate SNP rs1051295 and T2D by comparing beta-cell function and insulin sensitivity among rs1051295 genotypes in a general population of 1051 subjects at fasting and after glucose loading (oral glucose tolerance tests, OGTT) in 84 fasting glucose impaired subjects, and several T2D-related traits. We found that among the 19 available tag SNPs, only the KCNB1 rs1051295 was associated with T2D (P = 0.027), with the rs1051295 TT genotype associated with an increased risk of T2D compared with genotypes CC (P = 0.009). At fasting, rs1051295 genotype TT was associated with a 9.8% reduction in insulin sensitivity compared to CC (P = 0.008); along with increased plasma triglycerides (TG) levels (TT/CC: P = 0.046) and increased waist/hip (W/H) ratio (TT/CC: P = 0.013; TT/TC: P = 0.002). OGTT confirmed that genotype TT exhibited reduced insulin sensitivity by 16.3% (P = 0.030) compared with genotype TC+CC in a fasting glucose impaired population. The KCNB1 rs1051295 genotype TT in the Chinese Han population is associated with decreased insulin sensitivity and increased plasma TG and W/H ratio, which together contribute to an increased risk for T2D.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23431371 PMCID: PMC3576392 DOI: 10.1371/journal.pone.0056365
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
KCNB1 gene tag SNPs information.
| SNP ID | Genomic position (bp) | Genic position | Alleles (major/minor) | MAF | HWE ( |
| rs1051295 | 47988905 | 3′-UTR | T/C | 0.45 | 1.00 |
| rs186942 | 48045742 | Intron | G/C | 0.24 | 0.85 |
| rs1961192 | 48006307 | intron | T/C | 0.47 | 0.41 |
| rs237451 | 48024332 | intron | G/A | 0.33 | 0.46 |
| rs237458 | 48031549 | intron | C/T | 0.44 | 1.00 |
| rs237476 | 48051382 | intron | G/T | 0.24 | 0.17 |
| rs237477 | 48057448 | intron | T/C | 0.28 | 0.34 |
| rs3787318 | 48058067 | intron | T/C | 0.10 | 1.00 |
| rs4810952 | 48006175 | intron | T/C | 0.38 | 0.90 |
| rs553213 | 48097564 | intron | T/C | 0.35 | 1.00 |
| rs562954 | 48092076 | intron | G/A | 0.20 | 1.00 |
| rs572845 | 48076614 | intron | C/T | 0.11 | 0.74 |
| rs579113 | 48075912 | intron | A/G | 0.23 | 0.27 |
| rs610412 | 48078202 | intron | A/C | 0.16 | 0.46 |
| rs6125647 | 48027463 | intron | A/C | 0.24 | 0.91 |
| rs653070 | 48087408 | intron | C/T | 0.31 | 0.33 |
| rs7269864 | 48096608 | intron | T/C | 0.11 | 0.87 |
| rs742759 | 48061145 | intron | G/A | 0.13 | 1.00 |
| rs802952 | 48086269 | Intron | T/C | 0.22 | 0.19 |
| rs926673 | 48030010 | intron | T/G | 0.19 | 0.05 |
MAF: minor allele frequency. HWE: Hardy-Weinberg equilibrium.
Characteristics of the participants in the case-control study.
| Variables | Screen study | Replication study | ||||
| Case (n = 112) | Control (n = 114) |
| Case (n = 176) | Control (n = 236) |
| |
| Age (years) | 66.96±13.32 | 67.32±15.25 | 0.85 | 65.10±14.06 | 63.92±15.01 | 0.42 |
| M/F | 56/56 | 68/46 | 0.15 | 88/88 | 124/112 | 0.61 |
| BMI (kg/m2) | 25.21±4.33 | 23.69±4.20 |
| 25.31±4.29 | 23.53±3.99 |
|
| W/H ratio | 0.90±0.07 | 0.89±0.08 | 0.37 | 0.89±0.07 | 0.88±0.09 | 0.27 |
| TG (mmol/L) | 2.15±1.78 | 1.27±0.62 |
| 2.02±1.57 | 1.41±0.75 |
|
| SBP(mmHg) | 129.74±16.23 | 126.35±17.99 | 0.11 | 129.91±15.61 | 126.37±17.73 |
|
| DBP (mmHg) | 74.55±9.41 | 76.06±12.00 | 0.30 | 75.87±9.50 | 76.05±12.00 | 0.87 |
| FPG (mmol/L) | 9.29±3.06 | 5.29±0.75 |
| 9.16±3.68 | 5.50±0.79 |
|
M/F: male/female. W/H ratio: waist/hip circumference. TG: triglycerides. SBP: systolic blood pressure. DBP: diastolic blood pressure. FPG: Fasting plasma glucose. Data are presented as mean ±SD. P from independent-sample t test except P for M/F from χ2 test.
Distribution of two tag SNPs of KCNB1 in the screening study.
| SNP ID | Cases | Controls | χ2 |
|
| OR (95% CI) |
| rs1051295 | n = 110 | n = 111 | 3.41 | 0.18 | ||
| CC | 13 | 23 | ||||
| TC | 62 | 59 | ||||
| TT | 35 | 29 | ||||
| TT vs CC | 0.08 | 2.18(0.89–5.31) | ||||
| TT vs TC | 0.15 | 1.81(0.89–4.09) | ||||
| rs742759 | n = 103 | n = 110 | 4.63 | 0.16 | ||
| GG | 69 | 86 | ||||
| GA | 23 | 18 | ||||
| AA | 11 | 6 | ||||
| AA vs GG | 0.19 | 1.44(0.84–2.56) | ||||
| AA vs GA | 0.56 | 1.45(0.42–4.96) |
P: from χ2 test; P: from Logistic regression analysis and adjusted for age, gender and BMI. OR: odds ratio. CI: confidence interval.
Distribution of KCNB1 rs1051295 SNPs in the replication study.
| SNP ID | Cases | Controls | χ2 |
|
| OR (95% CI) |
| rs1051295 | n = 169 | n = 224 | 7.21 | 0.027 | ||
| CC | 21 | 48 | ||||
| TC | 93 | 123 | ||||
| TT | 55 | 53 | ||||
| TT vs CC |
| 2.58(1.27,5.23) | ||||
| TT vs TC | 0.226 | 1.36(0.83,2.25) | ||||
| Dominentmodel | 0.051 | 0.071 | 0.64(0.40,1.04) | |||
| Recessivemodel |
|
| 2.10(1.13,3.90) |
P: from χ2 test; P from Logistic regression analysis and adjusted for age, gender and BMI. Dominant Model: CC+TC compared with TT; Recessive Model: TT+TC compared with CC. OR: odds ratio. CI: confidence interval.
Comparison of T2D-related traits among rs1051295 genotypes in a general population at fasting.
| Variable | TT | TC | CC | TT vs TC | TT vs CC | ||||
|
|
| b (95% CIs) |
|
| b (95% CIs) | ||||
| N (%) | 346 (33.62) | 514(49.95) | 169(16.42) | ||||||
| M/F | 153/193 | 226/288 | 74/95 | 0.94 | 0.93 | ||||
| Age (years) | 40.03±10.64 | 40.30±10.16 | 38.72±9.66 | 0.70 | 0.17 | ||||
| BMI (kg/m2) | 23.12±2.42 | 22.90±2.49 | 22.92±2.55 | 0.18 | 0.110 | 0.25 (−0.06,0.57) | 0.38 | 0.565 | 0.12(0.30, 0.54) |
| W/H ratio | 0.81±0.07 | 0.80±0.07 | 0.79±0.07 |
|
| 0.01(0.00,0.02) |
|
| 0.01(0.00,0.02) |
| TG(mmol/L)* | 1.04(0.74,1.46) | 0.98(0.68,1.38) | 0.93(0.67,1.31) | 0.07 | 0.092 | 0.05(−0.01,0.11) |
|
| 0.08(0.00, 0.16) |
| HDL-C(mmol/L) | 1.65±0.34 | 1.65±0.35 | 1.67±0.29 | 0.91 | 0.873 | −0.004(−0.05,0.04) | 0.62 | 0.478 | −0.02(−0.08, 0.04) |
| LDL-C(mmol/L) | 2.72±0.78 | 2.64±0.66 | 2.63±0.68 | 0.14 | 0.337 | 0.05(−0.05, 0.15) | 0.19 | 0.466 | 0.05(−0.08, 0.18) |
| TCH(mmol/L) | 4.65±0.88 | 4.57±0.83 | 4.55±0.76 | 0.15 | 0.221 | 0.07(−0.04,0.18) | 0.18 | 0.422 | 0.06(−0.09, 0.21) |
| FPG (mmol/L) | 4.98±0.51 | 4.99±0.46 | 4.99±0.50 | 0.76 | 0.635 | −0.02(−0.08,0.05) | 0.73 | 0.362 | −0.04(−0.12,0.04) |
| FINS(mUI/L) | 9.08±3.51 | 8.60±3.26 | 8.14±3.07 |
| 0.091 | 0.38 (−0.06,0.81) |
|
| 0.86(0.27, 1.44) |
| HOMA-S%* | 90.12(68.55,116.15) | 95.18(71.60,123.40) | 99.85(78.40,126.98) |
| 0.096 | −0.04(−0.09,0.01) |
|
| −0.09(−0.16, −0.02) |
| HOMA-B%* | 105.30(86.85,125.75) | 102.30(80.90,121.00) | 99.15(79.40,118.50) |
| 0.068 | 0.04(−0.00, 0.08) |
|
| 0.08(0.03, 0.13) |
M/F: male/female. W/H ratio: Waist/hip circumference. TG: Triglycerides. HDL-C: high-density lipoprotein cholesterol. LDL-C: low-density lipoprotein cholesterol. TCH: total cholesterol. FPG: Fasting plasma glucose. FINS: Fasting insulin b: unstandardized coefficients, CI: confidence interval. P: from one-way ANOVA test except for P for M/F from χ2 test; P b and 95% CIs: from multiple linear regression analysis adjusted for age, gender and BMI. *presented as median and quartiles and natural Log-transferred for analysis.
Comparison of T2D-related traits between rs1051295 genotype CC+TC and genotype TT in a type 2 diabetic-suspected population undergoing an OGTT.
| Variable | TT | TC+CC |
|
| b (95% CIs) |
| N | 23 | 61 | |||
| M/F | 9/14 | 25/36 | 0.82 | ||
| Age | 54.70±9.90 | 51.92±10.64 | 0.29 | ||
| BMI(kg/m2) | 24.07±3.06 | 25.01±2.66 | 0.18 | ||
| Glucose0(mmol/L) | 6.64±1.82 | 6.27±1.28 | 0.30 | ||
| Glucose30(mmol/L) | 10.97±2.98 | 10.54±2.55 | 0.54 | ||
| Glucose60(mmol/L) | 11.81±3.90 | 11.60±3.67 | 0.85 | ||
| Glucose120(mmol/L) | 9.89±4.44 | 8.47±3.45 | 0.13 | ||
| Insulin0(mmol/L)* | 12.84(9.94,16.06) | 12.53(9.83,15.25) | 0.61 | ||
| Insulin30(mmol/L)* | 44.87(33.41,75.59) | 42.83(27.25,71.73) | 0.36 | ||
| Insulin60(mmol/L)* | 66.53(49.38,107.76) | 65.64(43.42,98.72) | 0.74 | ||
| Insulin120(mmol/L)* | 76.45(33.74,106.15) | 54.84(35.32,74.54) | 0.10 | ||
| ISSI-2* | 32.23(26.67,37.71) | 37.54(21.45,50.33) | 0.30 | 0.13 | −0.29 (−0.67,0.09) |
| Matsuda index | 5.05±1.94 | 6.03±2.38 | 0.11 |
| −1.34 (−2.56, −0.12) |
M/F: male/female. W/H ratio: waist/hip circumference. b: unstandardized coefficients. CI: confidence interval. P: from one-way ANOVA test except for P for M/F from χ2 test; P, b and 95% CIs were from multiple linear regression analysis and adjusted for age, gender, and BMI. *presented as median and quartiles and natural Log-transferred for analysis.
Figure 1Relationship between plasma insulin and glucose levels during OGTT (0, 30th, 60th and 120th min).
n = 23 for rs1051295 genotype TT and 61 for rs1051295 genotypes CC+TC.