Literature DB >> 24098264

N-(1-Allyl-1H-indazol-5-yl)-4-meth-oxy-benzene-sulfonamide hemihydrate.

Hakima Chicha1, El Mostapha Rakib, Detlef Geffken, Mohamed Saadi, Lahcen El Ammari.   

Abstract

In the title compound, C17H17N3O3 (.)0.5H2O, the indazole system makes a dihedral angle of 46.19 (8)° with the plane through the benzene ring and is nearly perpendicular to the allyl group, as indicated by the dihedral angle of 81.2 (3)°. In the crystal, the water mol-ecule, disordered over two sites related by an inversion center, forms O-H⋯N bridges between indazole N atoms of two sulfonamide mol-ecules. It is also connected via N-H⋯O inter-action to the third sulfonamide mol-ecule; however, due to the water mol-ecule disorder, only every second mol-ecule of sulfonamide participates in this inter-action. This missing inter-action results in a slight disorder of the sulfonamide S,O and N atoms which are split over two sites with half occupancy. With the help of C-H⋯O hydrogen bonds, the mol-ecules are further connected into a three-dimensional network.

Entities:  

Year:  2013        PMID: 24098264      PMCID: PMC3790445          DOI: 10.1107/S1600536813025543

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of sulfonamides, see: Bouissane et al. (2006 ▶); Supuran & Scozzafava (2003 ▶); Smith & Jones (2008 ▶); Scozzafava et al. (2003 ▶). For their anti­proliferative activity, see: Abbassi et al. (2012 ▶, 2013 ▶).

Experimental

Crystal data

2C17H17N3O3S·H2O M = 704.81 Monoclinic, a = 8.2099 (7) Å b = 13.8928 (12) Å c = 15.0495 (14) Å β = 92.327 (3)° V = 1715.1 (3) Å3 Z = 2 Mo Kα radiation μ = 0.21 mm−1 T = 296 K 0.38 × 0.36 × 0.25 mm

Data collection

Bruker X8 APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.693, T max = 0.747 19356 measured reflections 4088 independent reflections 2737 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.119 S = 1.01 4088 reflections 266 parameters 2 restraints H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813025543/gk2590sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813025543/gk2590Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813025543/gk2590Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C17H17N3O3S·H2OF(000) = 740
Mr = 704.81Dx = 1.365 Mg m3
Monoclinic, P21/nMelting point: 370 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 8.2099 (7) ÅCell parameters from 4088 reflections
b = 13.8928 (12) Åθ = 2.7–27.9°
c = 15.0495 (14) ŵ = 0.21 mm1
β = 92.327 (3)°T = 296 K
V = 1715.1 (3) Å3Block, colourless
Z = 20.38 × 0.36 × 0.25 mm
Bruker X8 APEX diffractometer4088 independent reflections
Radiation source: fine-focus sealed tube2737 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.031
φ and ω scansθmax = 27.9°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −10→10
Tmin = 0.693, Tmax = 0.747k = −17→18
19356 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0496P)2 + 0.3501P] where P = (Fo2 + 2Fc2)/3
4088 reflections(Δ/σ)max < 0.001
266 parametersΔρmax = 0.15 e Å3
2 restraintsΔρmin = −0.17 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.4495 (2)−0.11076 (14)0.23403 (11)0.0607 (5)
C20.3084 (2)−0.06191 (13)0.20204 (12)0.0602 (4)
H20.29890.00380.21260.072*
C30.18511 (19)−0.10864 (12)0.15581 (12)0.0560 (4)
H30.0918−0.07640.13510.067*
C40.20595 (18)−0.20712 (11)0.14118 (10)0.0469 (4)
C50.34564 (19)−0.25681 (12)0.17146 (11)0.0514 (4)
C60.4694 (2)−0.20697 (14)0.21927 (11)0.0618 (5)
H60.5628−0.23880.24040.074*
C70.3185 (2)−0.35243 (13)0.14334 (14)0.0680 (5)
H70.3916−0.40260.15420.082*
C8−0.0440 (2)−0.25522 (14)0.04742 (13)0.0656 (5)
H8A−0.1088−0.20840.07810.079*
H8B−0.1062−0.31450.04250.079*
C9−0.0116 (3)−0.21878 (16)−0.04337 (13)0.0753 (6)
H90.0561−0.2554−0.07810.090*
C10−0.0701 (3)−0.14065 (18)−0.07713 (17)0.0909 (7)
H10A−0.1382−0.1021−0.04430.109*
H10B−0.0443−0.1225−0.13440.109*
C110.64190 (18)0.08820 (13)0.17142 (11)0.0528 (4)
C120.6036 (2)0.07706 (13)0.08101 (11)0.0572 (4)
H120.62670.01940.05280.069*
C130.5320 (2)0.15075 (13)0.03369 (11)0.0574 (4)
H130.50560.1426−0.02650.069*
C140.49834 (19)0.23733 (12)0.07447 (12)0.0536 (4)
C150.5389 (2)0.24981 (15)0.16372 (13)0.0670 (5)
H150.51870.30820.19140.080*
C160.6095 (2)0.17525 (16)0.21134 (12)0.0676 (5)
H160.63580.18360.27150.081*
C170.3917 (3)0.39644 (15)0.0586 (2)0.1045 (9)
H17A0.34080.43710.01400.157*
H17B0.49150.42550.08050.157*
H17C0.31970.38840.10680.157*
N10.5992 (6)−0.0729 (4)0.2783 (4)0.0542 (11)0.50
H10.5661−0.04470.32750.065*0.50
S10.7087 (4)0.0029 (3)0.2443 (3)0.0586 (6)0.50
O10.7780 (11)−0.0690 (6)0.1876 (6)0.0787 (17)0.50
O20.8022 (7)0.0461 (5)0.3174 (4)0.0836 (15)0.50
N1'0.5494 (6)−0.0450 (4)0.2905 (4)0.0524 (11)0.50
H1'0.5163−0.01680.33970.063*0.50
S1'0.7382 (4)−0.0190 (3)0.2239 (2)0.0574 (7)0.50
O1'0.7928 (11)−0.0869 (6)0.1587 (5)0.0736 (12)0.50
O2'0.8508 (7)0.0180 (5)0.2899 (4)0.0801 (15)0.50
N20.1771 (2)−0.36215 (11)0.09978 (11)0.0683 (4)
N30.10705 (17)−0.27305 (10)0.09919 (9)0.0558 (4)
O30.42555 (16)0.30521 (9)0.02113 (9)0.0731 (4)
O40.5283 (4)−0.0107 (2)0.44955 (19)0.0927 (10)0.50
H40.47280.04030.45980.111*0.50
H4'0.5735−0.02610.50010.111*0.50
U11U22U33U12U13U23
C10.0617 (10)0.0779 (12)0.0414 (9)−0.0260 (9)−0.0095 (7)0.0098 (8)
C20.0597 (10)0.0590 (10)0.0623 (11)−0.0108 (8)0.0071 (8)−0.0109 (9)
C30.0428 (8)0.0562 (10)0.0689 (11)0.0012 (7)0.0005 (7)−0.0025 (8)
C40.0431 (8)0.0524 (9)0.0447 (8)−0.0025 (6)−0.0032 (6)0.0017 (7)
C50.0479 (8)0.0552 (10)0.0507 (9)0.0003 (7)−0.0046 (7)0.0098 (7)
C60.0507 (9)0.0754 (12)0.0581 (10)−0.0083 (8)−0.0146 (8)0.0235 (9)
C70.0651 (11)0.0545 (11)0.0831 (13)0.0084 (9)−0.0107 (10)0.0057 (9)
C80.0545 (10)0.0683 (12)0.0723 (12)−0.0088 (8)−0.0198 (9)0.0031 (9)
C90.0764 (13)0.0858 (14)0.0621 (12)0.0144 (11)−0.0179 (10)−0.0080 (11)
C100.0900 (16)0.0918 (17)0.0903 (16)0.0097 (13)−0.0014 (13)0.0144 (13)
C110.0391 (8)0.0661 (10)0.0526 (9)−0.0119 (7)−0.0045 (7)−0.0006 (8)
C120.0607 (10)0.0550 (10)0.0557 (10)−0.0045 (8)−0.0002 (8)−0.0104 (8)
C130.0674 (10)0.0614 (11)0.0430 (9)−0.0061 (8)−0.0028 (8)−0.0060 (8)
C140.0465 (8)0.0547 (10)0.0595 (10)−0.0072 (7)−0.0009 (7)−0.0052 (8)
C150.0658 (11)0.0704 (12)0.0643 (12)0.0015 (9)−0.0020 (9)−0.0259 (10)
C160.0607 (11)0.0954 (15)0.0461 (10)−0.0057 (10)−0.0061 (8)−0.0158 (10)
C170.1018 (18)0.0579 (13)0.151 (2)0.0092 (12)−0.0287 (17)−0.0145 (14)
N10.051 (3)0.064 (3)0.048 (2)−0.0047 (19)−0.009 (2)−0.0044 (19)
S10.0382 (11)0.0669 (15)0.0694 (16)−0.0012 (8)−0.0146 (9)0.0034 (9)
O10.059 (2)0.056 (3)0.122 (6)0.028 (2)0.020 (3)−0.019 (3)
O20.069 (3)0.091 (4)0.087 (4)−0.013 (2)−0.045 (3)0.003 (2)
N1'0.050 (3)0.065 (3)0.042 (2)−0.0058 (19)−0.0044 (18)−0.0026 (19)
S1'0.0353 (12)0.0652 (18)0.0704 (18)−0.0059 (9)−0.0121 (9)0.0045 (11)
O1'0.046 (2)0.064 (3)0.112 (5)0.016 (2)0.014 (3)−0.017 (2)
O2'0.056 (3)0.082 (3)0.099 (4)−0.014 (2)−0.036 (2)0.007 (2)
N20.0745 (10)0.0528 (9)0.0764 (11)0.0032 (7)−0.0109 (8)−0.0062 (8)
N30.0533 (8)0.0537 (8)0.0590 (8)−0.0026 (6)−0.0133 (6)−0.0004 (7)
O30.0735 (9)0.0590 (8)0.0856 (9)−0.0007 (6)−0.0104 (7)0.0020 (7)
O40.133 (3)0.0734 (18)0.0708 (17)0.0370 (18)−0.0081 (18)−0.0020 (15)
C1—C61.366 (3)C11—S1'1.848 (4)
C1—C21.411 (3)C12—C131.366 (2)
C1—N11.471 (6)C12—H120.9300
C1—N1'1.474 (6)C13—C141.383 (2)
C2—C31.369 (2)C13—H130.9300
C2—H20.9300C14—O31.361 (2)
C3—C41.397 (2)C14—C151.382 (3)
C3—H30.9300C15—C161.374 (3)
C4—N31.3623 (19)C15—H150.9300
C4—C51.399 (2)C16—H160.9300
C5—C61.403 (2)C17—O31.419 (3)
C5—C71.409 (2)C17—H17A0.9600
C6—H60.9300C17—H17B0.9600
C7—N21.317 (2)C17—H17C0.9600
C7—H70.9300N1—S11.489 (8)
C8—N31.459 (2)N1—H10.8898
C8—C91.491 (3)S1—O21.445 (7)
C8—H8A0.9700S1—O11.4463 (10)
C8—H8B0.9700N1'—S1'1.914 (7)
C9—C101.283 (3)N1'—H1'0.8898
C9—H90.9300S1'—O2'1.425 (7)
C10—H10A0.9300S1'—O1'1.4460 (10)
C10—H10B0.9300N2—N31.365 (2)
C11—C161.381 (3)O4—O4i1.633 (6)
C11—C121.393 (2)O4—H40.8600
C11—S11.691 (5)O4—H4'0.8600
C6—C1—C2121.13 (15)C12—C13—H13119.7
C6—C1—N1108.7 (2)C14—C13—H13119.7
C2—C1—N1129.9 (3)O3—C14—C15124.71 (16)
C6—C1—N1'129.3 (2)O3—C14—C13115.57 (15)
C2—C1—N1'109.2 (2)C15—C14—C13119.73 (17)
C3—C2—C1121.71 (17)C16—C15—C14119.50 (17)
C3—C2—H2119.1C16—C15—H15120.3
C1—C2—H2119.1C14—C15—H15120.3
C2—C3—C4116.86 (16)C15—C16—C11121.18 (16)
C2—C3—H3121.6C15—C16—H16119.4
C4—C3—H3121.6C11—C16—H16119.4
N3—C4—C3131.06 (14)O3—C17—H17A109.5
N3—C4—C5106.54 (14)O3—C17—H17B109.5
C3—C4—C5122.40 (14)H17A—C17—H17B109.5
C4—C5—C6119.36 (16)O3—C17—H17C109.5
C4—C5—C7104.47 (14)H17A—C17—H17C109.5
C6—C5—C7136.17 (16)H17B—C17—H17C109.5
C1—C6—C5118.54 (16)C1—N1—S1127.0 (5)
C1—C6—H6120.7C1—N1—H1104.9
C5—C6—H6120.7S1—N1—H1100.6
N2—C7—C5111.81 (15)O2—S1—O1121.8 (5)
N2—C7—H7124.1O2—S1—N1110.0 (5)
C5—C7—H7124.1O1—S1—N188.4 (5)
N3—C8—C9111.58 (16)O2—S1—C11110.6 (4)
N3—C8—H8A109.3O1—S1—C11103.1 (5)
C9—C8—H8A109.3N1—S1—C11122.3 (3)
N3—C8—H8B109.3C1—N1'—S1'104.9 (3)
C9—C8—H8B109.3C1—N1'—H1132.6
H8A—C8—H8B108.0S1'—N1'—H1110.1
C10—C9—C8124.9 (2)C1—N1'—H1'124.8
C10—C9—H9117.6S1'—N1'—H1'129.3
C8—C9—H9117.6O2'—S1'—O1'119.8 (4)
C9—C10—H10A120.0O2'—S1'—C11105.2 (3)
C9—C10—H10B120.0O1'—S1'—C11112.0 (5)
H10A—C10—H10B120.0O2'—S1'—N1'102.7 (4)
C16—C11—C12118.85 (17)O1'—S1'—N1'120.8 (4)
C16—C11—S1113.23 (17)C11—S1'—N1'92.0 (2)
C12—C11—S1127.62 (18)C7—N2—N3105.84 (14)
C16—C11—S1'127.33 (16)C4—N3—N2111.33 (13)
C12—C11—S1'113.81 (17)C4—N3—C8127.69 (14)
C13—C12—C11120.08 (16)N2—N3—C8120.42 (14)
C13—C12—H12120.0C14—O3—C17118.21 (17)
C11—C12—H12120.0H4—O4—H4'104.9
C12—C13—C14120.64 (16)
C6—C1—C2—C30.6 (3)C16—C11—S1—O2−32.4 (4)
N1—C1—C2—C3174.6 (3)C12—C11—S1—O2154.1 (3)
N1'—C1—C2—C3−172.7 (3)S1'—C11—S1—O2124.8 (11)
C1—C2—C3—C4−0.4 (3)C16—C11—S1—O1−164.0 (4)
C2—C3—C4—N3179.20 (17)C12—C11—S1—O122.4 (5)
C2—C3—C4—C5−0.3 (3)S1'—C11—S1—O1−6.8 (9)
N3—C4—C5—C6−178.82 (15)C16—C11—S1—N199.6 (3)
C3—C4—C5—C60.8 (3)C12—C11—S1—N1−74.0 (3)
N3—C4—C5—C70.46 (18)S1'—C11—S1—N1−103.2 (11)
C3—C4—C5—C7−179.94 (17)C6—C1—N1'—S1'77.0 (4)
C2—C1—C6—C5−0.1 (3)C2—C1—N1'—S1'−110.3 (2)
N1—C1—C6—C5−175.3 (3)N1—C1—N1'—S1'44.8 (10)
N1'—C1—C6—C5171.8 (3)C16—C11—S1'—O2'−32.7 (4)
C4—C5—C6—C1−0.6 (3)C12—C11—S1'—O2'145.7 (3)
C7—C5—C6—C1−179.5 (2)S1—C11—S1'—O2'−59.3 (9)
C4—C5—C7—N20.1 (2)C16—C11—S1'—O1'−164.4 (4)
C6—C5—C7—N2179.2 (2)C12—C11—S1'—O1'14.0 (5)
N3—C8—C9—C10−125.3 (2)S1—C11—S1'—O1'169.0 (11)
C16—C11—C12—C13−1.4 (3)C16—C11—S1'—N1'71.0 (3)
S1—C11—C12—C13171.9 (2)C12—C11—S1'—N1'−110.6 (2)
S1'—C11—C12—C13−179.90 (18)S1—C11—S1'—N1'44.4 (9)
C11—C12—C13—C140.7 (3)C1—N1'—S1'—O2'−162.4 (4)
C12—C13—C14—O3−179.39 (15)C1—N1'—S1'—O1'−25.8 (6)
C12—C13—C14—C150.6 (3)C1—N1'—S1'—C1191.5 (3)
O3—C14—C15—C16178.76 (17)C5—C7—N2—N3−0.7 (2)
C13—C14—C15—C16−1.3 (3)C3—C4—N3—N2179.53 (18)
C14—C15—C16—C110.6 (3)C5—C4—N3—N2−0.92 (18)
C12—C11—C16—C150.7 (3)C3—C4—N3—C88.2 (3)
S1—C11—C16—C15−173.5 (2)C5—C4—N3—C8−172.26 (17)
S1'—C11—C16—C15179.0 (2)C7—N2—N3—C41.0 (2)
C6—C1—N1—S1118.9 (3)C7—N2—N3—C8173.05 (17)
C2—C1—N1—S1−55.7 (5)C9—C8—N3—C478.0 (2)
N1'—C1—N1—S1−86.9 (12)C9—C8—N3—N2−92.6 (2)
C1—N1—S1—O2157.9 (4)C15—C14—O3—C171.5 (3)
C1—N1—S1—O1−78.7 (5)C13—C14—O3—C17−178.45 (18)
C1—N1—S1—C1125.7 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···O40.891.932.802 (6)165
C3—H3···O1′ii0.932.503.237 (9)136
C8—H8A···O1′ii0.972.253.202 (4)168
C7—H7···O2iii0.932.633.447 (7)147
O4—H4···N2iv0.862.022.748 (3)142
O4—H4′···N2v0.862.293.082 (3)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O40.891.932.802 (6)165
C3—H3⋯O1′i 0.932.503.237 (9)136
C8—H8A⋯O1′i 0.972.253.202 (4)168
C7—H7⋯O2ii 0.932.633.447 (7)147
O4—H4⋯N2iii 0.862.022.748 (3)142
O4—H4′⋯N2iv 0.862.293.082 (3)152

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  8 in total

1.  Synthesis and biological evaluation of N-(7-indazolyl)benzenesulfonamide derivatives as potent cell cycle inhibitors.

Authors:  L Bouissane; S El Kazzouli; S Léonce; B Pfeiffer; E M Rakib; M Khouili; G Guillaumet
Journal:  Bioorg Med Chem       Date:  2005-11-07       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Anticancer and antiviral sulfonamides.

Authors:  Andrea Scozzafava; Takashi Owa; Antonio Mastrolorenzo; Claudiu T Supuran
Journal:  Curr Med Chem       Date:  2003-06       Impact factor: 4.530

4.  Synthesis, antiproliferative and apoptotic activities of N-(6(4)-indazolyl)-benzenesulfonamide derivatives as potential anticancer agents.

Authors:  Najat Abbassi; Hakima Chicha; El Mostapha Rakib; Abdellah Hannioui; Mdaghri Alaoui; Abdelouahed Hajjaji; Detlef Geffken; Cinzia Aiello; Rosaria Gangemi; Camillo Rosano; Maurizio Viale
Journal:  Eur J Med Chem       Date:  2012-09-17       Impact factor: 6.514

Review 5.  Protease inhibitors of the sulfonamide type: anticancer, antiinflammatory, and antiviral agents.

Authors:  Claudiu T Supuran; Angela Casini; Andrea Scozzafava
Journal:  Med Res Rev       Date:  2003-09       Impact factor: 12.944

Review 6.  The sulfonamide group as a structural alert: A distorted story?

Authors:  Dennis A Smith; Rhys M Jones
Journal:  Curr Opin Drug Discov Devel       Date:  2008-01

7.  Ethyl 3-[6-(4-meth-oxy-benzene-sulfon-amido)-2H-indazol-2-yl]propano-ate monohydrate.

Authors:  Najat Abbassi; El Mostapha Rakib; Abdellah Hannioui; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-01-09

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.