Literature DB >> 23963792

Engineered solubility tag for solution NMR of proteins.

Amy M Ruschak1, Justine D Rose, Michael P Coughlin, Tomasz L Religa.   

Abstract

The low solubility of many proteins hinders large scale expression and purification as well as biophysical measurements. Here, we devised a general strategy to solubilize a protein by conjugating it at a solvent-exposed position to a 6 kDa protein that was re-engineered to be highly soluble. We applied this method to the CARD domain of Apoptosis-associated speck-like protein containing a CARD (ASC), which represents one member of a class of proteins that are notoriously prone to aggregation. Attachment of the tag to a cysteine residue, introduced by site-directed mutagenesis at its self-association interface, improved the solubility of the ASC CARD over 50-fold under physiological conditions. Although it is not possible to use nuclear magnetic resonance (NMR) to obtain a high quality 2D correlation spectrum of the wild type domain under physiological conditions, we demonstrate that NMR relaxation parameters of the solubilized variant are sufficiently improved to facilitate virtually any demanding measurement. The method shown here represents a straightforward approach for dramatically increasing protein solubility, enabled by ease of labeling as well as flexibility in tag placement with minimal perturbation to the target.
© 2013 The Protein Society.

Entities:  

Keywords:  CARD domain; nuclear magnetic resonance; protein A; protein aggregation; protein engineering; protein solubility

Mesh:

Substances:

Year:  2013        PMID: 23963792      PMCID: PMC3831679          DOI: 10.1002/pro.2337

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  50 in total

1.  Toward a molecular understanding of protein solubility: increased negative surface charge correlates with increased solubility.

Authors:  Ryan M Kramer; Varad R Shende; Nicole Motl; C Nick Pace; J Martin Scholtz
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

Review 2.  Macromolecular NMR spectroscopy for the non-spectroscopist: beyond macromolecular solution structure determination.

Authors:  Michael Bieri; Ann H Kwan; Mehdi Mobli; Glenn F King; Joel P Mackay; Paul R Gooley
Journal:  FEBS J       Date:  2011-01-28       Impact factor: 5.542

3.  Ubiquitin folds through a highly polarized transition state.

Authors:  Heather M Went; Sophie E Jackson
Journal:  Protein Eng Des Sel       Date:  2005-04-27       Impact factor: 1.650

Review 4.  The death-fold superfamily of homotypic interaction motifs.

Authors:  Kristof Kersse; Jelle Verspurten; Tom Vanden Berghe; Peter Vandenabeele
Journal:  Trends Biochem Sci       Date:  2011-07-26       Impact factor: 13.807

5.  Proteasome allostery as a population shift between interchanging conformers.

Authors:  Amy M Ruschak; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

6.  Segmental isotope labeling of proteins for NMR structural study using a protein S tag for higher expression and solubility.

Authors:  Hiroshi Kobayashi; G V T Swapna; Kuen-Phon Wu; Yuliya Afinogenova; Kenith Conover; Binchen Mao; Gaetano T Montelione; Masayori Inouye
Journal:  J Biomol NMR       Date:  2012-03-03       Impact factor: 2.835

7.  Abnormal SDS-PAGE migration of cytosolic proteins can identify domains and mechanisms that control surfactant binding.

Authors:  Yunhua Shi; Richard A Mowery; Jonathan Ashley; Michelle Hentz; Alejandro J Ramirez; Basar Bilgicer; Hilda Slunt-Brown; David R Borchelt; Bryan F Shaw
Journal:  Protein Sci       Date:  2012-08       Impact factor: 6.725

8.  Structure and dynamics of the second CARD of human RIG-I provide mechanistic insights into regulation of RIG-I activation.

Authors:  Fabien Ferrage; Kaushik Dutta; Estanislao Nistal-Villán; Jenish R Patel; María T Sánchez-Aparicio; Pablo De Ioannes; Angeliki Buku; Gloria González Aseguinolaza; Adolfo García-Sastre; Aneel K Aggarwal
Journal:  Structure       Date:  2012-10-11       Impact factor: 5.006

Review 9.  The quiet renaissance of protein nuclear magnetic resonance.

Authors:  Paul J Barrett; Jiang Chen; Min-Kyu Cho; Ji-Hun Kim; Zhenwei Lu; Sijo Mathew; Dungeng Peng; Yuanli Song; Wade D Van Horn; Tiandi Zhuang; Frank D Sönnichsen; Charles R Sanders
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162

10.  The CARD plays a critical role in ASC foci formation and inflammasome signalling.

Authors:  Martina Proell; Motti Gerlic; Peter D Mace; John C Reed; Stefan J Riedl
Journal:  Biochem J       Date:  2013-02-01       Impact factor: 3.857

View more
  1 in total

1.  Protein Abundance Biases the Amino Acid Composition of Disordered Regions to Minimize Non-functional Interactions.

Authors:  Benjamin Dubreuil; Or Matalon; Emmanuel D Levy
Journal:  J Mol Biol       Date:  2019-08-20       Impact factor: 5.469

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.