Literature DB >> 23353683

Polymer crowders and protein crowders act similarly on protein folding stability.

Huan-Xiang Zhou1.   

Abstract

Recently a polymer crowder and two protein crowders were found to have opposite effects on the folding stability of chymotrypsin inhibitor 2 (CI2), suggesting that they interact differently with CI2. Here we propose that all the macromolecular crowders act similarly, with an entropic component favoring the folded state and an enthalpic component favoring the unfolded state. The net effect is destabilizing below a crossover temperature but stabilizing above it. This general trend is indeed observed in recent experiments and hints experimental temperature as a reason for the opposite crowding effects of the polymer and protein crowders.
Copyright © 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23353683      PMCID: PMC3581760          DOI: 10.1016/j.febslet.2013.01.030

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  28 in total

1.  Molecular crowding enhances native state stability and refolding rates of globular proteins.

Authors:  Margaret S Cheung; Dmitri Klimov; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-21       Impact factor: 11.205

2.  Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: macromolecular crowding and protein stability revisited.

Authors:  Allen P Minton
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

3.  Effects of pH, salt, and macromolecular crowding on the stability of FK506-binding protein: an integrated experimental and theoretical study.

Authors:  Daniel S Spencer; Ke Xu; Timothy M Logan; Huan-Xiang Zhou
Journal:  J Mol Biol       Date:  2005-08-05       Impact factor: 5.469

4.  Destabilised mutants of ubiquitin gain equal stability in crowded solutions.

Authors:  Andrew Roberts; Sophie E Jackson
Journal:  Biophys Chem       Date:  2007-03-30       Impact factor: 2.352

5.  Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder.

Authors:  Brian C McNulty; Gregory B Young; Gary J Pielak
Journal:  J Mol Biol       Date:  2005-12-01       Impact factor: 5.469

6.  Efficacy of macromolecular crowding in forcing proteins to fold.

Authors:  Youxing Qu; D W Bolen
Journal:  Biophys Chem       Date:  2002-12-10       Impact factor: 2.352

7.  Protein stability curves.

Authors:  W J Becktel; J A Schellman
Journal:  Biopolymers       Date:  1987-11       Impact factor: 2.505

8.  Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2.

Authors:  S E Jackson; M Moracci; N elMasry; C M Johnson; A R Fersht
Journal:  Biochemistry       Date:  1993-10-26       Impact factor: 3.162

9.  Thermal versus guanidine-induced unfolding of ubiquitin. An analysis in terms of the contributions from charge-charge interactions to protein stability.

Authors:  B Ibarra-Molero; V V Loladze; G I Makhatadze; J M Sanchez-Ruiz
Journal:  Biochemistry       Date:  1999-06-22       Impact factor: 3.162

10.  15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions.

Authors:  Xuanjun Ai; Zheng Zhou; Yawen Bai; Wing-Yiu Choy
Journal:  J Am Chem Soc       Date:  2006-03-29       Impact factor: 15.419

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  22 in total

1.  Impact of reconstituted cytosol on protein stability.

Authors:  Mohona Sarkar; Austin E Smith; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

2.  Macromolecular crowding effects on two homologs of ribosomal protein s16: protein-dependent structural changes and local interactions.

Authors:  Therese Mikaelsson; Jörgen Ådén; Pernilla Wittung-Stafshede; Lennart B-Å Johansson
Journal:  Biophys J       Date:  2014-07-15       Impact factor: 4.033

3.  The extracellular protein VlsE is destabilized inside cells.

Authors:  Irisbel Guzman; Hannah Gelman; Jonathan Tai; Martin Gruebele
Journal:  J Mol Biol       Date:  2013-09-04       Impact factor: 5.469

4.  Residue level quantification of protein stability in living cells.

Authors:  William B Monteith; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

5.  Structural and functional impact of troponin C-mediated Ca2+ sensitization on myofilament lattice spacing and cross-bridge mechanics in mouse cardiac muscle.

Authors:  David Gonzalez-Martinez; Jamie R Johnston; Maicon Landim-Vieira; Weikang Ma; Olga Antipova; Omar Awan; Thomas C Irving; P Bryant Chase; J Renato Pinto
Journal:  J Mol Cell Cardiol       Date:  2018-08-21       Impact factor: 5.000

6.  Protein Composition Determines the Effect of Crowding on the Properties of Disordered Proteins.

Authors:  Cayla M Miller; Young C Kim; Jeetain Mittal
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

Review 7.  Electrostatic Interactions in Protein Structure, Folding, Binding, and Condensation.

Authors:  Huan-Xiang Zhou; Xiaodong Pang
Journal:  Chem Rev       Date:  2018-01-10       Impact factor: 60.622

Review 8.  Protein folding, binding, and droplet formation in cell-like conditions.

Authors:  Sanbo Qin; Huan-Xiang Zhou
Journal:  Curr Opin Struct Biol       Date:  2016-10-20       Impact factor: 6.809

9.  Minimal effects of macromolecular crowding on an intrinsically disordered protein: a small-angle neutron scattering study.

Authors:  David P Goldenberg; Brian Argyle
Journal:  Biophys J       Date:  2014-02-18       Impact factor: 4.033

10.  Simulation and Modeling of Crowding Effects on the Thermodynamic and Kinetic Properties of Proteins with Atomic Details.

Authors:  Huan-Xiang Zhou; Sanbo Qin
Journal:  Biophys Rev       Date:  2013-06-01
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