Literature DB >> 16343531

Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder.

Brian C McNulty1, Gregory B Young, Gary J Pielak.   

Abstract

The natively disordered protein alpha-synuclein is the primary component of Lewy bodies, the cellular hallmark of Parkinson's disease. Most studies of this protein are performed in dilute solution, but its biologically relevant role is performed in the crowded environment inside cells. We addressed the effects of macromolecular crowding on alpha-synuclein by combining NMR data acquired in living Escherichia coli with in vitro NMR data. The crowded environment in the E.coli periplasm prevents a conformational change that is detected at 35 degrees C in dilute solution. This change is associated with an increase in hydrodynamic radius and the formation of secondary structure in the N-terminal 100 amino acid residues. By preventing this temperature-induced conformational change, crowding in the E.coli periplasm stabilizes the disordered monomer. We obtain the same stabilization in vitro upon crowding alpha-synuclein with 300 g/l of bovine serum albumin, indicating that crowding alone is sufficient to stabilize the disordered, monomeric protein. Two disease-associated variants (A30P and A53T) behave in the same way in both dilute solution and in the E.coli periplasm. These data reveal the importance of approaching the effects of macromolecular crowding on a case-by-case basis. Additionally, our work shows that discrete structured protein conformations may not be achieved by alpha-synuclein inside cells, implicating the commonly overlooked aspect of macromolecular crowding as a possible factor in the etiology of Parkinson's disease.

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Year:  2005        PMID: 16343531     DOI: 10.1016/j.jmb.2005.11.033

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  64 in total

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2.  A soluble α-synuclein construct forms a dynamic tetramer.

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

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Authors:  Vladimir N Uversky; A Keith Dunker
Journal:  Biochim Biophys Acta       Date:  2010-02-01

4.  Unraveling the nature of the segmentation clock: Intrinsic disorder of clock proteins and their interaction map.

Authors:  Sourav Roy; Santiago Schnell; Predrag Radivojac
Journal:  Comput Biol Chem       Date:  2006-06-22       Impact factor: 2.877

5.  Peeking into living eukaryotic cells with high-resolution NMR.

Authors:  Lisa M Charlton; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-31       Impact factor: 11.205

6.  Translocation of alpha-synuclein expressed in Escherichia coli.

Authors:  Guoping Ren; Xi Wang; Shufeng Hao; Hongyu Hu; Chih-Chen Wang
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

7.  Engineering productive enzyme confinement.

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Journal:  Trends Biotechnol       Date:  2007-03-26       Impact factor: 19.536

Review 8.  In-Cell NMR Spectroscopy of Intrinsically Disordered Proteins.

Authors:  Nicholas Sciolino; David S Burz; Alexander Shekhtman
Journal:  Proteomics       Date:  2019-01-15       Impact factor: 3.984

9.  Modulating Enzyme Activity by Altering Protein Dynamics with Solvent.

Authors:  Michael R Duff; Jose M Borreguero; Matthew J Cuneo; Arvind Ramanathan; Junhong He; Ganesh Kamath; S Chakra Chennubhotla; Flora Meilleur; Elizabeth E Howell; Kenneth W Herwig; Dean A A Myles; Pratul K Agarwal
Journal:  Biochemistry       Date:  2018-07-06       Impact factor: 3.162

10.  Protein (19)F NMR in Escherichia coli.

Authors:  Conggang Li; Gui-Fang Wang; Yaqiang Wang; Rachel Creager-Allen; Evan A Lutz; Heidi Scronce; Kristin M Slade; Rebecca A S Ruf; Ryan A Mehl; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

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