Literature DB >> 16551092

15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions.

Xuanjun Ai1, Zheng Zhou, Yawen Bai, Wing-Yiu Choy.   

Abstract

The effects of macromolecular crowding on protein stability and folding kinetics have been studied using the recently developed 15N spin relaxation dispersion technique. By applying this method to a redesigned apocytochrome b562, the kinetics and thermodynamics of the protein folding processes in both the presence and the absence of crowding agents have been characterized. The result indicates that, even under the mild crowded environments (in the presence of 85 mg/mL of PEG 20K), the folding rate of the protein can speed up significantly while the unfolded rate remains unchanged within experimental error.

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Year:  2006        PMID: 16551092     DOI: 10.1021/ja057832n

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  The folding transition-state ensemble of a four-helix bundle protein: helix propensity as a determinant and macromolecular crowding as a probe.

Authors:  Harianto Tjong; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Generalized fundamental measure theory for atomistic modeling of macromolecular crowding.

Authors:  Sanbo Qin; Huan-Xiang Zhou
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-03-26

3.  In-cell thermodynamics and a new role for protein surfaces.

Authors:  Austin E Smith; Larry Z Zhou; Annelise H Gorensek; Michael Senske; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-11       Impact factor: 11.205

4.  Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin.

Authors:  Loren Stagg; Shao-Qing Zhang; Margaret S Cheung; Pernilla Wittung-Stafshede
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-16       Impact factor: 11.205

Review 5.  Protein folding in confined and crowded environments.

Authors:  Huan-Xiang Zhou
Journal:  Arch Biochem Biophys       Date:  2007-08-01       Impact factor: 4.013

6.  Using NMR to distinguish viscosity effects from nonspecific protein binding under crowded conditions.

Authors:  Conggang Li; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2009-02-04       Impact factor: 15.419

7.  Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin.

Authors:  Dirar Homouz; Loren Stagg; Pernilla Wittung-Stafshede; Margaret S Cheung
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

8.  Quantification of excluded volume effects on the folding landscape of Pseudomonas aeruginosa apoazurin in vitro.

Authors:  Alexander Christiansen; Pernilla Wittung-Stafshede
Journal:  Biophys J       Date:  2013-10-01       Impact factor: 4.033

9.  Atomistic modeling of macromolecular crowding predicts modest increases in protein folding and binding stability.

Authors:  Sanbo Qin; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

10.  Residue-level interrogation of macromolecular crowding effects on protein stability.

Authors:  Lisa M Charlton; Christopher O Barnes; Conggang Li; Jillian Orans; Gregory B Young; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2008-05-07       Impact factor: 15.419

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