| Literature DB >> 23316124 |
Peter Eastman1, Mark S Friedrichs, John D Chodera, Randall J Radmer, Christopher M Bruns, Joy P Ku, Kyle A Beauchamp, Thomas J Lane, Lee-Ping Wang, Diwakar Shukla, Tony Tye, Mike Houston, Timo Stich, Christoph Klein, Michael R Shirts, Vijay S Pande.
Abstract
OpenMM is a software toolkit for performing molecular simulations on a range of high performance computing architectures. It is based on a layered architecture: the lower layers function as a reusable library that can be invoked by any application, while the upper layers form a complete environment for running molecular simulations. The library API hides all hardware-specific dependencies and optimizations from the users and developers of simulation programs: they can be run without modification on any hardware on which the API has been implemented. The current implementations of OpenMM include support for graphics processing units using the OpenCL and CUDA frameworks. In addition, OpenMM was designed to be extensible, so new hardware architectures can be accommodated and new functionality (e.g., energy terms and integrators) can be easily added.Entities:
Year: 2012 PMID: 23316124 PMCID: PMC3539733 DOI: 10.1021/ct300857j
Source DB: PubMed Journal: J Chem Theory Comput ISSN: 1549-9618 Impact factor: 6.006