Literature DB >> 15303899

Quantum statistics and classical mechanics: real time correlation functions from ring polymer molecular dynamics.

Ian R Craig1, David E Manolopoulos.   

Abstract

We propose an approximate method for calculating Kubo-transformed real-time correlation functions involving position-dependent operators, based on path integral (Parrinello-Rahman) molecular dynamics. The method gives the exact quantum mechanical correlation function at time zero, exactly satisfies the quantum mechanical detailed balance condition, and for correlation functions of the form C(Ax)(t) and C(xB)(t) it gives the exact result for a harmonic potential. It also works reasonably well at short times for more general potentials and correlation functions, as we illustrate with some example calculations. The method provides a consistent improvement over purely classical molecular dynamics that is most apparent in the low-temperature regime. (c) 2004 American Institute of Physics

Entities:  

Year:  2004        PMID: 15303899     DOI: 10.1063/1.1777575

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  30 in total

1.  Quantum dynamics of complex molecular systems.

Authors:  William H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

2.  Unraveling quantum mechanical effects in water using isotopic fractionation.

Authors:  Thomas E Markland; B J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-07       Impact factor: 11.205

3.  Dynamics and dissipation in enzyme catalysis.

Authors:  Nicholas Boekelheide; Romelia Salomón-Ferrer; Thomas F Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

4.  Formulation of state projected centroid molecular dynamics: Microcanonical ensemble and connection to the Wigner distribution.

Authors:  Lindsay Orr; Lisandro Hernández de la Peña; Pierre-Nicholas Roy
Journal:  J Chem Phys       Date:  2017-06-07       Impact factor: 3.488

5.  An extension of stochastic hierarchy equations of motion for the equilibrium correlation functions.

Authors:  Yaling Ke; Yi Zhao
Journal:  J Chem Phys       Date:  2017-06-07       Impact factor: 3.488

6.  Perturbation Approach for Computing Infrared Spectra of the Local Mode of Probe Molecules.

Authors:  Rui-Jie Xue; Adam Grofe; He Yin; Zexing Qu; Jiali Gao; Hui Li
Journal:  J Chem Theory Comput       Date:  2016-12-07       Impact factor: 6.006

Review 7.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

8.  Proton storage site in bacteriorhodopsin: new insights from quantum mechanics/molecular mechanics simulations of microscopic pK(a) and infrared spectra.

Authors:  Puja Goyal; Nilanjan Ghosh; Prasad Phatak; Maike Clemens; Michael Gaus; Marcus Elstner; Qiang Cui
Journal:  J Am Chem Soc       Date:  2011-09-06       Impact factor: 15.419

9.  OpenMM 4: A Reusable, Extensible, Hardware Independent Library for High Performance Molecular Simulation.

Authors:  Peter Eastman; Mark S Friedrichs; John D Chodera; Randall J Radmer; Christopher M Bruns; Joy P Ku; Kyle A Beauchamp; Thomas J Lane; Lee-Ping Wang; Diwakar Shukla; Tony Tye; Mike Houston; Timo Stich; Christoph Klein; Michael R Shirts; Vijay S Pande
Journal:  J Chem Theory Comput       Date:  2012-10-18       Impact factor: 6.006

10.  The strengths and limitations of effective centroid force models explored by studying isotopic effects in liquid water.

Authors:  Ying Yuan; Jicun Li; Xin-Zheng Li; Feng Wang
Journal:  J Chem Phys       Date:  2018-05-14       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.