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Literature DB >> 23302925

Lack of evidence for existence of noncanonical RNA editing.

Robert Piskol, Zhiyu Peng, Jun Wang, Jin Billy Li.

Abstract

Mesh：

Year: 2013 PMID： 23302925 DOI： 10.1038/nbt.2472

Source DB: PubMed Journal: Nat Biotechnol ISSN： 1087-0156 Impact factor: 54.908

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8 in total

1. BLAT--the BLAST-like alignment tool.

Authors: W James Kent
Journal: Genome Res Date: 2002-04 Impact factor: 9.043

2. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Authors: Claudia L Kleinman; Jacek Majewski
Journal: Science Date: 2012-03-16 Impact factor: 47.728

3. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Authors: Wei Lin; Robert Piskol; Meng How Tan; Jin Billy Li
Journal: Science Date: 2012-03-16 Impact factor: 47.728

4. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Authors: Joseph K Pickrell; Yoav Gilad; Jonathan K Pritchard
Journal: Science Date: 2012-03-16 Impact factor: 47.728

5. Accurate identification of human Alu and non-Alu RNA editing sites.

Authors: Gokul Ramaswami; Wei Lin; Robert Piskol; Meng How Tan; Carrie Davis; Jin Billy Li
Journal: Nat Methods Date: 2012-04-04 Impact factor: 28.547

6. Widespread RNA and DNA sequence differences in the human transcriptome.

Authors: Mingyao Li; Isabel X Wang; Yun Li; Alan Bruzel; Allison L Richards; Jonathan M Toung; Vivian G Cheung
Journal: Science Date: 2011-05-19 Impact factor: 47.728

7. Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome.

Authors: Zhiyu Peng; Yanbing Cheng; Bertrand Chin-Ming Tan; Lin Kang; Zhijian Tian; Yuankun Zhu; Wenwei Zhang; Yu Liang; Xueda Hu; Xuemei Tan; Jing Guo; Zirui Dong; Yan Liang; Li Bao; Jun Wang
Journal: Nat Biotechnol Date: 2012-02-12 Impact factor: 54.908

8. Very few RNA and DNA sequence differences in the human transcriptome.

Authors: Daniel R Schrider; Jean-Francois Gout; Matthew W Hahn
Journal: PLoS One Date: 2011-10-12 Impact factor: 3.240

8 in total

40 in total

1. Reliable identification of genomic variants from RNA-seq data.

Authors: Robert Piskol; Gokul Ramaswami; Jin Billy Li
Journal: Am J Hum Genet Date: 2013-09-26 Impact factor: 11.025

2. Human coding RNA editing is generally nonadaptive.

Authors: Guixia Xu; Jianzhi Zhang
Journal: Proc Natl Acad Sci U S A Date: 2014-02-24 Impact factor: 11.205

Review 3. Single-nucleotide variants in human RNA: RNA editing and beyond.

Authors: Yan Guo; Hui Yu; David C Samuels; Wei Yue; Scott Ness; Ying-Yong Zhao
Journal: Brief Funct Genomics Date: 2019-02-14 Impact factor: 4.241

4. Analysis and design of RNA sequencing experiments for identifying RNA editing and other single-nucleotide variants.

Authors: Jae-Hyung Lee; Jason K Ang; Xinshu Xiao
Journal: RNA Date: 2013-04-18 Impact factor: 4.942

5. RNA editing in cancer: Mechanistic, prognostic, and therapeutic implications.

Authors: Leng Han; Han Liang
Journal: Mol Cell Oncol Date: 2015-12-14

6. Transcriptome-wide identification of adenosine-to-inosine editing using the ICE-seq method.

Authors: Tsutomu Suzuki; Hiroki Ueda; Shunpei Okada; Masayuki Sakurai
Journal: Nat Protoc Date: 2015-04-09 Impact factor: 13.491

7. The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers.

Authors: Leng Han; Lixia Diao; Shuangxing Yu; Xiaoyan Xu; Jie Li; Rui Zhang; Yang Yang; Henrica M J Werner; A Karina Eterovic; Yuan Yuan; Jun Li; Nikitha Nair; Rosalba Minelli; Yiu Huen Tsang; Lydia W T Cheung; Kang Jin Jeong; Jason Roszik; Zhenlin Ju; Scott E Woodman; Yiling Lu; Kenneth L Scott; Jin Billy Li; Gordon B Mills; Han Liang
Journal: Cancer Cell Date: 2015-10-01 Impact factor: 31.743