Literature DB >> 23299939

Chtop is a component of the dynamic TREX mRNA export complex.

Chung-Te Chang1, Guillaume M Hautbergue, Matthew J Walsh, Nicolas Viphakone, Thamar B van Dijk, Sjaak Philipsen, Stuart A Wilson.   

Abstract

The TREX complex couples nuclear pre-mRNA processing with mRNA export and contains multiple protein components, including Uap56, Alyref, Cip29 and the multi-subunit THO complex. Here, we have identified Chtop as a novel TREX component. We show that both Chtop and Alyref activate the ATPase and RNA helicase activities of Uap56 and that Uap56 functions to recruit both Alyref and Chtop onto mRNA. As observed with the THO complex subunit Thoc5, Chtop binds to the NTF2-like domain of Nxf1, and this interaction requires arginine methylation of Chtop. Using RNAi, we show that co-knockdown of Alyref and Chtop results in a potent mRNA export block. Chtop binds to Uap56 in a mutually exclusive manner with Alyref, and Chtop binds to Nxf1 in a mutually exclusive manner with Thoc5. However, Chtop, Thoc5 and Nxf1 exist in a single complex in vivo. Together, our data indicate that TREX and Nxf1 undergo dynamic remodelling, driven by the ATPase cycle of Uap56 and post-translational modifications of Chtop.

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Year:  2013        PMID: 23299939      PMCID: PMC3567497          DOI: 10.1038/emboj.2012.342

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  40 in total

1.  Export and stability of naturally intronless mRNAs require specific coding region sequences and the TREX mRNA export complex.

Authors:  Haixin Lei; Anusha P Dias; Robin Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-18       Impact factor: 11.205

2.  The export factor Yra1 modulates mRNA 3' end processing.

Authors:  Sara A Johnson; Hyunmin Kim; Benjamin Erickson; David L Bentley
Journal:  Nat Struct Mol Biol       Date:  2011-09-25       Impact factor: 15.369

3.  A role for TREX components in the release of spliced mRNA from nuclear speckle domains.

Authors:  Anusha P Dias; Kobina Dufu; Haixin Lei; Robin Reed
Journal:  Nat Commun       Date:  2010-10-19       Impact factor: 14.919

4.  Arginine methyltransferase affects interactions and recruitment of mRNA processing and export factors.

Authors:  Michael C Yu; François Bachand; Anne E McBride; Suzanne Komili; Jason M Casolari; Pamela A Silver
Journal:  Genes Dev       Date:  2004-08-15       Impact factor: 11.361

5.  Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster.

Authors:  Jan Rehwinkel; Andrea Herold; Kerstin Gari; Thomas Köcher; Michaela Rode; Francesca L Ciccarelli; Matthias Wilm; Elisa Izaurralde
Journal:  Nat Struct Mol Biol       Date:  2004-05-09       Impact factor: 15.369

6.  Cotranscriptional recruitment of the mRNA export factor Yra1 by direct interaction with the 3' end processing factor Pcf11.

Authors:  Sara Ann Johnson; Gabrielle Cubberley; David L Bentley
Journal:  Mol Cell       Date:  2008-12-24       Impact factor: 17.970

7.  The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA.

Authors:  Alexander P Golovanov; Guillaume M Hautbergue; Aura M Tintaru; Lu-Yun Lian; Stuart A Wilson
Journal:  RNA       Date:  2006-09-25       Impact factor: 4.942

8.  A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.

Authors:  Abimael Cruz-Migoni; Guillaume M Hautbergue; Peter J Artymiuk; Patrick J Baker; Monika Bokori-Brown; Chung-Te Chang; Mark J Dickman; Angela Essex-Lopresti; Sarah V Harding; Nor Muhammad Mahadi; Laura E Marshall; George W Mobbs; Rahmah Mohamed; Sheila Nathan; Sarah A Ngugi; Catherine Ong; Wen Fong Ooi; Lynda J Partridge; Helen L Phillips; M Firdaus Raih; Sergei Ruzheinikov; Mitali Sarkar-Tyson; Svetlana E Sedelnikova; Sophie J Smither; Patrick Tan; Richard W Titball; Stuart A Wilson; David W Rice
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

9.  An essential role for Clp1 in assembly of polyadenylation complex CF IA and Pol II transcription termination.

Authors:  Raphaël Haddad; Frédérique Maurice; Nicolas Viphakone; Florence Voisinet-Hakil; Sébastien Fribourg; Lionel Minvielle-Sébastia
Journal:  Nucleic Acids Res       Date:  2011-10-12       Impact factor: 16.971

10.  The RNA-binding motif protein 15B (RBM15B/OTT3) acts as cofactor of the nuclear export receptor NXF1.

Authors:  Hiroaki Uranishi; Andrei S Zolotukhin; Susan Lindtner; Soren Warming; Gen-Mu Zhang; Jenifer Bear; Neal G Copeland; Nancy A Jenkins; George N Pavlakis; Barbara K Felber
Journal:  J Biol Chem       Date:  2009-07-08       Impact factor: 5.157

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  41 in total

Review 1.  Control of mammalian gene expression by selective mRNA export.

Authors:  Vihandha O Wickramasinghe; Ronald A Laskey
Journal:  Nat Rev Mol Cell Biol       Date:  2015-06-17       Impact factor: 94.444

Review 2.  Modulating the expression of Chtop, a versatile regulator of gene-specific transcription and mRNA export.

Authors:  Keiichi Izumikawa; Hideaki Ishikawa; Richard J Simpson; Nobuhiro Takahashi
Journal:  RNA Biol       Date:  2018-05-11       Impact factor: 4.652

3.  Enhancer of Rudimentary Homolog Affects the Replication Stress Response through Regulation of RNA Processing.

Authors:  Gina Kavanaugh; Runxiang Zhao; Yan Guo; Kareem N Mohni; Gloria Glick; Monica E Lacy; M Shane Hutson; Manuel Ascano; David Cortez
Journal:  Mol Cell Biol       Date:  2015-06-22       Impact factor: 4.272

4.  The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming.

Authors:  Li Wang; Yi-Liang Miao; Xiaofeng Zheng; Brad Lackford; Bingying Zhou; Leng Han; Chengguo Yao; James M Ward; Adam Burkholder; Inna Lipchina; David C Fargo; Konrad Hochedlinger; Yongsheng Shi; Carmen J Williams; Guang Hu
Journal:  Cell Stem Cell       Date:  2013-12-05       Impact factor: 24.633

Review 5.  Mechanisms of nuclear mRNA export: A structural perspective.

Authors:  Yihu Xie; Yi Ren
Journal:  Traffic       Date:  2019-09-12       Impact factor: 6.215

6.  THOC2 Mutations Implicate mRNA-Export Pathway in X-Linked Intellectual Disability.

Authors:  Raman Kumar; Mark A Corbett; Bregje W M van Bon; Joshua A Woenig; Lloyd Weir; Evelyn Douglas; Kathryn L Friend; Alison Gardner; Marie Shaw; Lachlan A Jolly; Chuan Tan; Matthew F Hunter; Anna Hackett; Michael Field; Elizabeth E Palmer; Melanie Leffler; Carolyn Rogers; Jackie Boyle; Melanie Bienek; Corinna Jensen; Griet Van Buggenhout; Hilde Van Esch; Katrin Hoffmann; Martine Raynaud; Huiying Zhao; Robin Reed; Hao Hu; Stefan A Haas; Eric Haan; Vera M Kalscheuer; Jozef Gecz
Journal:  Am J Hum Genet       Date:  2015-07-09       Impact factor: 11.025

7.  LncRNA Pnky Positively Regulates Neural Stem Cell Migration by Modulating mRNA Splicing and Export of Target Genes.

Authors:  Jiannan Du; Yuan Li; Yuting Su; Wenqian Zhi; Jiale Zhang; Cheng Zhang; Juan Wang; Wensheng Deng; Shasha Zhao
Journal:  Cell Mol Neurobiol       Date:  2022-06-24       Impact factor: 5.046

8.  The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.

Authors:  Hans F Ehrnsberger; Christina Pfaff; Ines Hachani; María Flores-Tornero; Brian B Sørensen; Gernot Längst; Stefanie Sprunck; Marion Grasser; Klaus D Grasser
Journal:  Plant Physiol       Date:  2019-01-30       Impact factor: 8.340

9.  GGGGCC repeat expansion in C9orf72 compromises nucleocytoplasmic transport.

Authors:  Brian D Freibaum; Yubing Lu; Rodrigo Lopez-Gonzalez; Nam Chul Kim; Sandra Almeida; Kyung-Ha Lee; Nisha Badders; Marc Valentine; Bruce L Miller; Philip C Wong; Leonard Petrucelli; Hong Joo Kim; Fen-Biao Gao; J Paul Taylor
Journal:  Nature       Date:  2015-08-26       Impact factor: 49.962

10.  DDX39B promotes translation through regulation of pre-ribosomal RNA levels.

Authors:  Sharad Awasthi; Baskar Chakrapani; Arun Mahesh; Pavithra L Chavali; Sreenivas Chavali; Arunkumar Dhayalan
Journal:  RNA Biol       Date:  2018-09-19       Impact factor: 4.652

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