Literature DB >> 31513326

Mechanisms of nuclear mRNA export: A structural perspective.

Yihu Xie1, Yi Ren1.   

Abstract

Export of mRNA from the nucleus to the cytoplasm is a critical process for all eukaryotic gene expression. As mRNA is synthesized, it is packaged with a myriad of RNA-binding proteins to form ribonucleoprotein particles (mRNPs). For each step in the processes of maturation and export, mRNPs must have the correct complement of proteins. Much of the mRNA export pathway revolves around the heterodimeric export receptor yeast Mex67Mtr2/human NXF1NXT1, which is recruited to signal the completion of nuclear mRNP assembly, mediates mRNP targeting/translocation through the nuclear pore complex (NPC), and is displaced at the cytoplasmic side of the NPC to release the mRNP into the cytoplasm. Directionality of the transport is governed by at least two DEAD-box ATPases, yeast Sub2/human UAP56 in the nucleus and yeast Dbp5/human DDX19 at the cytoplasmic side of the NPC, which respectively mediate the association and dissociation of Mex67Mtr2/NXF1NXT1 onto the mRNP. Here we review recent progress from structural studies of key constituents in different steps of nuclear mRNA export. These findings have laid the foundation for further studies to obtain a comprehensive mechanistic view of the mRNA export pathway.
© 2019 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  DEAD-box ATPase; export receptor; mRNA export; mRNP remodeling; structural biology

Mesh:

Substances:

Year:  2019        PMID: 31513326      PMCID: PMC7074880          DOI: 10.1111/tra.12691

Source DB:  PubMed          Journal:  Traffic        ISSN: 1398-9219            Impact factor:   6.215


  127 in total

1.  Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes.

Authors:  Katharine Compton Abruzzi; Scott Lacadie; Michael Rosbash
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

Review 2.  The nuclear pore complex and nuclear transport.

Authors:  Susan R Wente; Michael P Rout
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-14       Impact factor: 10.005

3.  Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.

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Journal:  EMBO J       Date:  1998-02-16       Impact factor: 11.598

4.  Human mRNA export machinery recruited to the 5' end of mRNA.

Authors:  Hong Cheng; Kobina Dufu; Chung-Sheng Lee; Jeanne L Hsu; Anusha Dias; Robin Reed
Journal:  Cell       Date:  2006-12-29       Impact factor: 41.582

5.  U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction.

Authors:  J Fleckner; M Zhang; J Valcárcel; M R Green
Journal:  Genes Dev       Date:  1997-07-15       Impact factor: 11.361

6.  VSV disrupts the Rae1/mrnp41 mRNA nuclear export pathway.

Authors:  Paula A Faria; Papia Chakraborty; Agata Levay; Glen N Barber; Heather J Ezelle; Jost Enninga; Carlos Arana; Jan van Deursen; Beatriz M A Fontoura
Journal:  Mol Cell       Date:  2005-01-07       Impact factor: 17.970

7.  Nuclear import of Ran is mediated by the transport factor NTF2.

Authors:  A Smith; A Brownawell; I G Macara
Journal:  Curr Biol       Date:  1998 Dec 17-31       Impact factor: 10.834

8.  Gle1 functions during mRNA export in an oligomeric complex that is altered in human disease.

Authors:  Andrew W Folkmann; Scott E Collier; Xiaoyan Zhan; Melanie D Ohi; Susan R Wente
Journal:  Cell       Date:  2013-10-24       Impact factor: 41.582

9.  The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression.

Authors:  Maren Schneider; Doris Hellerschmied; Tobias Schubert; Stefan Amlacher; Vinesh Vinayachandran; Rohit Reja; B Franklin Pugh; Tim Clausen; Alwin Köhler
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

10.  The GLFG repetitive region of the nucleoporin Nup116p interacts with Kap95p, an essential yeast nuclear import factor.

Authors:  M K Iovine; J L Watkins; S R Wente
Journal:  J Cell Biol       Date:  1995-12       Impact factor: 10.539

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  23 in total

Review 1.  Following the messenger: Recent innovations in live cell single molecule fluorescence imaging.

Authors:  Andreas Schmidt; Guoming Gao; Saffron R Little; Ameya P Jalihal; Nils G Walter
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-01-28       Impact factor: 9.957

2.  Unraveling docking and initiation of mRNA export through the nuclear pore complex.

Authors:  Mark Tingey; Weidong Yang
Journal:  Bioessays       Date:  2022-06-26       Impact factor: 4.653

3.  Nuclear speckle integrity and function require TAO2 kinase.

Authors:  Shengyan Gao; Matthew Esparza; Ishmael Dehghan; Vasilisa Aksenova; Ke Zhang; Kimberly Batten; Max B Ferretti; Bridget E Begg; Tolga Cagatay; Jerry W Shay; Adolfo García-Sastre; Elizabeth J Goldsmith; Zhijian J Chen; Mary Dasso; Kristen W Lynch; Melanie H Cobb; Beatriz M A Fontoura
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-15       Impact factor: 12.779

Review 4.  Spelling out the roles of individual nucleoporins in nuclear export of mRNA.

Authors:  Mark Tingey; Yichen Li; Wenlan Yu; Albert Young; Weidong Yang
Journal:  Nucleus       Date:  2022-12       Impact factor: 4.590

5.  The nucleoporin Gle1 activates DEAD-box protein 5 (Dbp5) by promoting ATP binding and accelerating rate limiting phosphate release.

Authors:  Shawn Gray; Wenxiang Cao; Ben Montpetit; Enrique M De La Cruz
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 19.160

6.  Cellular mRNA export factor UAP56 recognizes nucleic acid binding site of influenza virus NP protein.

Authors:  Andrew K Morris; Zhen Wang; Austin L Ivey; Yihu Xie; Pate S Hill; Kevin L Schey; Yi Ren
Journal:  Biochem Biophys Res Commun       Date:  2020-02-19       Impact factor: 3.575

7.  PCID2, a subunit of the Drosophila TREX-2 nuclear export complex, is essential for both mRNA nuclear export and its subsequent cytoplasmic trafficking.

Authors:  A A Glukhova; M M Kurshakova; E N Nabirochkina; S G Georgieva; D V Kopytova
Journal:  RNA Biol       Date:  2021-02-19       Impact factor: 4.652

Review 8.  One Ring to Rule them All? Structural and Functional Diversity in the Nuclear Pore Complex.

Authors:  Javier Fernandez-Martinez; Michael P Rout
Journal:  Trends Biochem Sci       Date:  2021-02-06       Impact factor: 14.264

9.  Structure and activation mechanism of the yeast RNA Pol II CTD kinase CTDK-1 complex.

Authors:  Yihu Xie; Christopher L Lord; Bradley P Clarke; Austin L Ivey; Pate S Hill; W Hayes McDonald; Susan R Wente; Yi Ren
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-19       Impact factor: 12.779

Review 10.  Nucleo-cytoplasmic transport defects and protein aggregates in neurodegeneration.

Authors:  Giacomo Bitetto; Alessio Di Fonzo
Journal:  Transl Neurodegener       Date:  2020-07-03       Impact factor: 8.014

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