Literature DB >> 23284455

1-[1-(2,1,3-Benzoxadiazol-5-ylmeth-yl)-1H-1,2,3-triazol-4-yl]hexan-1-one.

Jessie A Key1, Christopher W Cairo, Robert McDonald.   

Abstract

The title compound, C(15)H(17)N(5)O(2), was synthesized as part of a series of benzoxadiazole analogs which were examined for fluorescent properties by Cu-catalysed azide-alkyne cyclo-addition (CuAAC) of a 4-azido-methyl-benzoxadiazole substrate. The structure shows a nearly coplanar orientation of the hexa-none keto group and the 1,2,3-triazole ring [dihedral angle = 4.3 (3)°], while the benzoxadiazole and triazole groups are much more severely inclined [dihedral angle = 70.87 (4)°]. In the crystal, weak C-H⋯N inter-actions connect translationally-related triazole rings, while another set of C-H⋯N inter-actions is formed between inversion-related benzoxadiazole units, forming a three-dimensional network. The crystal studied was a non-merohedral twin with refined value of the twin fraction of 0.2289 (16).

Entities:  

Year:  2012        PMID: 23284455      PMCID: PMC3515235          DOI: 10.1107/S1600536812041839

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of similar benzoxadiazole compounds, see: Key & Cairo (2011 ▶); Li et al. (2010 ▶). For two related benzoxadiazole-triazole structures, see: Key, Cairo & Ferguson (2012 ▶); Key, Cairo & McDonald (2012 ▶). For structures of 1-(ar­yl)methyl-1,2,3-triazole compounds with 4-carbonyl substituents [RC(O) or ROC(O)], see: Harju et al. (2003 ▶); Huang et al. (2010 ▶); Dong & Cheng (2011 ▶); Jia & Lu (2011 ▶); Menendez et al. (2012 ▶).

Experimental

Crystal data

C15H17N5O2 M = 299.34 Monoclinic, a = 16.5752 (16) Å b = 5.5429 (5) Å c = 16.2452 (16) Å β = 91.3612 (13)° V = 1492.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 173 K 0.74 × 0.14 × 0.06 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (TWINABS; Bruker, 2008 ▶) T min = 0.935, T max = 0.995 45733 measured reflections 3079 independent reflections 2413 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.091 S = 1.03 3079 reflections 201 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXD (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536812041839/mw2084sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812041839/mw2084Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812041839/mw2084Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H17N5O2F(000) = 632
Mr = 299.34Dx = 1.333 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5974 reflections
a = 16.5752 (16) Åθ = 2.5–24.3°
b = 5.5429 (5) ŵ = 0.09 mm1
c = 16.2452 (16) ÅT = 173 K
β = 91.3612 (13)°Rod, colourless
V = 1492.1 (2) Å30.74 × 0.14 × 0.06 mm
Z = 4
Bruker APEXII CCD diffractometer3079 independent reflections
Radiation source: fine-focus sealed tube2413 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
Detector resolution: 8.26 pixels mm-1θmax = 26.5°, θmin = 1.2°
ω scansh = −20→20
Absorption correction: multi-scan (TWINABS; Bruker, 2008)k = −6→6
Tmin = 0.935, Tmax = 0.995l = −20→20
45733 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0331P)2 + 0.4646P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3079 reflectionsΔρmax = 0.19 e Å3
201 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0114 (15)
Geometry. All standard uncertainties (s.u.'s) (except the s.u. in the dihedral angle between two least-squares planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving least-squares planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.07380 (7)0.1919 (2)0.16041 (7)0.0409 (3)
O20.51268 (8)0.0088 (2)0.11538 (10)0.0593 (4)
N1−0.03444 (8)−0.0165 (3)0.18558 (9)0.0382 (4)
N2−0.03404 (8)0.3110 (3)0.09850 (9)0.0363 (3)
N30.29027 (7)0.1559 (2)0.00229 (8)0.0272 (3)
N40.29675 (8)0.3994 (2)0.00904 (9)0.0317 (3)
N50.36597 (7)0.4428 (2)0.04758 (9)0.0309 (3)
C10.02958 (9)−0.0270 (3)0.13892 (9)0.0287 (4)
C20.02964 (8)0.1752 (3)0.08476 (9)0.0272 (3)
C30.09143 (9)0.2061 (3)0.02610 (9)0.0278 (3)
H30.09180.3406−0.01010.033*
C40.14968 (9)0.0339 (3)0.02451 (9)0.0256 (3)
C50.14964 (9)−0.1700 (3)0.07982 (10)0.0289 (3)
H50.1919−0.28500.07660.035*
C60.09180 (9)−0.2039 (3)0.13617 (10)0.0311 (4)
H60.0927−0.33920.17210.037*
C70.21712 (9)0.0526 (3)−0.03636 (10)0.0314 (4)
H7A0.2294−0.1098−0.05800.038*
H7B0.19940.1553−0.08330.038*
C80.35461 (9)0.0453 (3)0.03618 (10)0.0293 (4)
H80.3646−0.12330.03950.035*
C90.40295 (9)0.2287 (3)0.06506 (10)0.0288 (4)
C100.48268 (9)0.2074 (3)0.10742 (10)0.0330 (4)
C110.52284 (9)0.4320 (3)0.13876 (11)0.0331 (4)
H11A0.48860.50570.18110.040*
H11B0.52680.54840.09280.040*
C120.60693 (9)0.3892 (3)0.17585 (11)0.0349 (4)
H12A0.60290.27670.22290.042*
H12B0.64090.31170.13410.042*
C130.64772 (9)0.6203 (3)0.20530 (10)0.0320 (4)
H13A0.64960.73550.15880.038*
H13B0.61490.69410.24880.038*
C140.73289 (10)0.5801 (3)0.23904 (12)0.0422 (4)
H14A0.76650.51540.19460.051*
H14B0.73150.45760.28330.051*
C150.77195 (11)0.8090 (4)0.27312 (11)0.0450 (5)
H15A0.82650.77230.29390.054*
H15B0.73970.87220.31800.054*
H15C0.77480.93000.22930.054*
U11U22U33U12U13U23
O10.0309 (6)0.0481 (8)0.0440 (7)0.0059 (6)0.0048 (5)−0.0042 (6)
O20.0466 (8)0.0264 (7)0.1034 (13)0.0055 (6)−0.0278 (8)−0.0033 (7)
N10.0341 (7)0.0428 (9)0.0379 (8)0.0016 (7)0.0028 (6)−0.0012 (7)
N20.0316 (7)0.0373 (8)0.0400 (8)0.0036 (6)−0.0019 (6)−0.0019 (7)
N30.0270 (6)0.0249 (7)0.0297 (7)−0.0020 (5)0.0035 (5)−0.0010 (6)
N40.0301 (7)0.0256 (7)0.0395 (8)−0.0010 (6)0.0011 (6)0.0004 (6)
N50.0277 (7)0.0242 (7)0.0409 (8)−0.0001 (5)0.0004 (6)0.0006 (6)
C10.0264 (8)0.0317 (9)0.0279 (8)−0.0042 (7)−0.0016 (6)−0.0018 (7)
C20.0244 (7)0.0258 (8)0.0310 (8)−0.0003 (6)−0.0061 (6)−0.0037 (7)
C30.0304 (8)0.0248 (8)0.0281 (8)−0.0035 (7)−0.0041 (6)0.0008 (7)
C40.0254 (7)0.0259 (8)0.0254 (8)−0.0039 (6)−0.0045 (6)−0.0033 (6)
C50.0281 (8)0.0250 (8)0.0334 (8)0.0024 (6)−0.0024 (6)−0.0016 (7)
C60.0354 (8)0.0256 (8)0.0323 (9)−0.0004 (7)−0.0019 (7)0.0037 (7)
C70.0311 (8)0.0339 (9)0.0292 (9)−0.0043 (7)−0.0012 (6)−0.0042 (7)
C80.0288 (8)0.0235 (8)0.0359 (9)0.0006 (6)0.0040 (6)0.0007 (7)
C90.0277 (8)0.0228 (8)0.0359 (9)0.0004 (6)0.0036 (6)−0.0001 (7)
C100.0290 (8)0.0258 (9)0.0442 (10)0.0011 (7)−0.0009 (7)0.0014 (8)
C110.0287 (8)0.0285 (9)0.0422 (10)−0.0003 (7)−0.0007 (7)−0.0011 (7)
C120.0323 (8)0.0312 (9)0.0410 (10)−0.0020 (7)−0.0037 (7)0.0050 (8)
C130.0295 (8)0.0344 (9)0.0321 (9)−0.0017 (7)−0.0005 (7)0.0001 (7)
C140.0370 (9)0.0402 (11)0.0488 (11)−0.0043 (8)−0.0115 (8)0.0055 (9)
C150.0410 (10)0.0518 (12)0.0418 (11)−0.0113 (9)−0.0077 (8)0.0025 (9)
O1—N21.3831 (18)C7—H7B0.9900
O1—N11.3835 (18)C8—C91.370 (2)
O2—C101.214 (2)C8—H80.9500
N1—C11.320 (2)C9—C101.480 (2)
N2—C21.320 (2)C10—C111.495 (2)
N3—C81.3376 (19)C11—C121.524 (2)
N3—N41.3581 (18)C11—H11A0.9900
N3—C71.4682 (19)C11—H11B0.9900
N4—N51.3160 (17)C12—C131.520 (2)
N5—C91.3627 (19)C12—H12A0.9900
C1—C21.425 (2)C12—H12B0.9900
C1—C61.425 (2)C13—C141.519 (2)
C2—C31.426 (2)C13—H13A0.9900
C3—C41.358 (2)C13—H13B0.9900
C3—H30.9500C14—C151.523 (2)
C4—C51.444 (2)C14—H14A0.9900
C4—C71.513 (2)C14—H14B0.9900
C5—C61.354 (2)C15—H15A0.9800
C5—H50.9500C15—H15B0.9800
C6—H60.9500C15—H15C0.9800
C7—H7A0.9900
N2—O1—N1112.57 (11)N5—C9—C10123.94 (14)
C1—N1—O1104.30 (13)C8—C9—C10127.49 (14)
C2—N2—O1104.33 (13)O2—C10—C9118.73 (15)
C8—N3—N4111.20 (12)O2—C10—C11122.74 (14)
C8—N3—C7129.75 (13)C9—C10—C11118.53 (14)
N4—N3—C7119.02 (13)C10—C11—C12113.64 (14)
N5—N4—N3106.65 (12)C10—C11—H11A108.8
N4—N5—C9108.83 (12)C12—C11—H11A108.8
N1—C1—C2109.40 (14)C10—C11—H11B108.8
N1—C1—C6129.85 (15)C12—C11—H11B108.8
C2—C1—C6120.73 (14)H11A—C11—H11B107.7
N2—C2—C1109.39 (14)C13—C12—C11112.92 (14)
N2—C2—C3129.38 (15)C13—C12—H12A109.0
C1—C2—C3121.22 (14)C11—C12—H12A109.0
C4—C3—C2116.78 (14)C13—C12—H12B109.0
C4—C3—H3121.6C11—C12—H12B109.0
C2—C3—H3121.6H12A—C12—H12B107.8
C3—C4—C5121.82 (14)C14—C13—C12113.13 (14)
C3—C4—C7120.05 (14)C14—C13—H13A109.0
C5—C4—C7118.13 (14)C12—C13—H13A109.0
C6—C5—C4122.70 (15)C14—C13—H13B109.0
C6—C5—H5118.6C12—C13—H13B109.0
C4—C5—H5118.6H13A—C13—H13B107.8
C5—C6—C1116.74 (15)C13—C14—C15113.11 (15)
C5—C6—H6121.6C13—C14—H14A109.0
C1—C6—H6121.6C15—C14—H14A109.0
N3—C7—C4111.25 (12)C13—C14—H14B109.0
N3—C7—H7A109.4C15—C14—H14B109.0
C4—C7—H7A109.4H14A—C14—H14B107.8
N3—C7—H7B109.4C14—C15—H15A109.5
C4—C7—H7B109.4C14—C15—H15B109.5
H7A—C7—H7B108.0H15A—C15—H15B109.5
N3—C8—C9104.76 (14)C14—C15—H15C109.5
N3—C8—H8127.6H15A—C15—H15C109.5
C9—C8—H8127.6H15B—C15—H15C109.5
N5—C9—C8108.57 (13)
N2—O1—N1—C1−0.28 (17)C2—C1—C6—C5−0.3 (2)
N1—O1—N2—C20.55 (16)C8—N3—C7—C494.95 (19)
C8—N3—N4—N50.04 (18)N4—N3—C7—C4−82.78 (18)
C7—N3—N4—N5178.17 (12)C3—C4—C7—N398.31 (16)
N3—N4—N5—C90.00 (17)C5—C4—C7—N3−81.66 (17)
O1—N1—C1—C2−0.09 (16)N4—N3—C8—C9−0.05 (17)
O1—N1—C1—C6−178.92 (15)C7—N3—C8—C9−177.93 (14)
O1—N2—C2—C1−0.58 (16)N4—N5—C9—C8−0.03 (18)
O1—N2—C2—C3178.43 (14)N4—N5—C9—C10179.26 (15)
N1—C1—C2—N20.45 (18)N3—C8—C9—N50.05 (17)
C6—C1—C2—N2179.40 (14)N3—C8—C9—C10−179.21 (15)
N1—C1—C2—C3−178.66 (14)N5—C9—C10—O2−175.34 (17)
C6—C1—C2—C30.3 (2)C8—C9—C10—O23.8 (3)
N2—C2—C3—C4−178.81 (15)N5—C9—C10—C114.8 (2)
C1—C2—C3—C40.1 (2)C8—C9—C10—C11−176.09 (16)
C2—C3—C4—C5−0.4 (2)O2—C10—C11—C124.1 (3)
C2—C3—C4—C7179.59 (13)C9—C10—C11—C12−176.03 (15)
C3—C4—C5—C60.4 (2)C10—C11—C12—C13178.46 (14)
C7—C4—C5—C6−179.61 (14)C11—C12—C13—C14−177.59 (15)
C4—C5—C6—C10.0 (2)C12—C13—C14—C15−176.65 (15)
N1—C1—C6—C5178.39 (16)
D—H···AD—HH···AD···AD—H···A
C3—H3···N2i0.952.583.475 (2)158
C8—H8···N5ii0.952.413.350 (2)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯N2i 0.952.583.475 (2)158
C8—H8⋯N5ii 0.952.413.350 (2)171

Symmetry codes: (i) ; (ii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Solid-phase synthesis of 1,2,3-triazoles via 1,3-dipolar cycloaddition.

Authors:  Kirsi Harju; Mikko Vahermo; Ilpo Mutikainen; Jari Yli-Kauhaluoma
Journal:  J Comb Chem       Date:  2003 Nov-Dec

3.  Methyl 1-(2,6-difluoro-benz-yl)-1H-1,2,3-triazole-4-carboxyl-ate.

Authors:  Su-Lan Dong; Xiao-Chun Cheng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-02

4.  Methyl 1-benzyl-1H-1,2,3-triazole-4-carboxyl-ate.

Authors:  Chiung-Cheng Huang; Feng-Ling Wu; Yih Hsing Lo; Wen-Rong Lai; Chia-Her Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-18

5.  Ethyl 1-(2,6-difluoro-benz-yl)-1H-1,2,3-triazole-4-carboxyl-ate.

Authors:  Jing Jia; Dingqiang Lu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-15

6.  5-(4-Hexyl-1H-1,2,3-triazol-1-yl)-2,1,3-benzoxadiazole.

Authors:  Jessie A Key; Christopher W Cairo; Michael J Ferguson
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13

7.  5-(1-Benzyl-1H-1,2,3-triazol-4-yl)-2,1,3-benzoxadiazole.

Authors:  Jessie A Key; Christopher W Cairo; Robert McDonald
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13
  7 in total
  2 in total

1.  5-(4-Hexyl-1H-1,2,3-triazol-1-yl)-2,1,3-benzoxadiazole.

Authors:  Jessie A Key; Christopher W Cairo; Michael J Ferguson
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13

2.  5-(1-Benzyl-1H-1,2,3-triazol-4-yl)-2,1,3-benzoxadiazole.

Authors:  Jessie A Key; Christopher W Cairo; Robert McDonald
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13
  2 in total

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