Literature DB >> 21754063

Methyl 1-(2,6-difluoro-benz-yl)-1H-1,2,3-triazole-4-carboxyl-ate.

Su-Lan Dong1, Xiao-Chun Cheng.   

Abstract

In the title compound, C(11)H(9)F(2)N(3)O(2), the triazole ring is planar, with an r.m.s. deviation of 0.0048 Å, and makes a dihedral angle of 77.3 (1)° with the benzene ring. In the crystal, weak inter-molecular C-H⋯O and C-H⋯N hydrogen bonds link the mol-ecules into chains along the b axis.

Entities:  

Year:  2011        PMID: 21754063      PMCID: PMC3099962          DOI: 10.1107/S1600536811006684

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthetic procedure and applications of the title compound, see: Arroyo (2007 ▶). The title compound is an inter­mediate in the preparation of the anti­convulsant drug rufinamide [systematic name 1-(2,6-difluoro­benz­yl)-1H-1,2,3-triazole-4-carboxamide], see: Meier (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H9F2N3O2 M = 253.21 Monoclinic, a = 8.4570 (17) Å b = 5.4140 (11) Å c = 12.125 (2) Å β = 92.28 (3)° V = 554.72 (18) Å3 Z = 2 Mo Kα radiation μ = 0.13 mm−1 T = 298 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.962, T max = 0.987 2187 measured reflections 1146 independent reflections 1035 reflections with I > 2σ(I) R int = 0.031 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.088 S = 1.04 1146 reflections 164 parameters 1 restraint H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811006684/bq2275sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811006684/bq2275Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9F2N3O2F(000) = 260
Mr = 253.21Dx = 1.516 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 25 reflections
a = 8.4570 (17) Åθ = 10–14°
b = 5.4140 (11) ŵ = 0.13 mm1
c = 12.125 (2) ÅT = 298 K
β = 92.28 (3)°Spiculate, colorless
V = 554.72 (18) Å30.30 × 0.20 × 0.10 mm
Z = 2
Enraf–Nonius CAD-4 diffractometer1035 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.031
graphiteθmax = 25.4°, θmin = 1.7°
ω/2θ scansh = 0→10
Absorption correction: ψ scan (North et al., 1968)k = −6→6
Tmin = 0.962, Tmax = 0.987l = −14→14
2187 measured reflections3 standard reflections every 200 reflections
1146 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0542P)2 + 0.0317P] where P = (Fo2 + 2Fc2)/3
1146 reflections(Δ/σ)max < 0.001
164 parametersΔρmax = 0.13 e Å3
1 restraintΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.4481 (2)0.4288 (4)0.80667 (14)0.0340 (5)
F10.67849 (18)0.9724 (4)0.74993 (14)0.0589 (5)
O10.3504 (3)0.2067 (5)0.47974 (15)0.0642 (6)
C10.7743 (3)0.7947 (5)0.7942 (2)0.0409 (6)
F20.74809 (18)0.2564 (4)0.96110 (13)0.0595 (5)
N20.3697 (2)0.2386 (5)0.85061 (16)0.0424 (5)
O20.2160 (2)−0.0844 (5)0.56720 (16)0.0613 (6)
C20.9334 (3)0.8063 (6)0.7754 (2)0.0500 (7)
H2B0.97450.93320.73360.060*
N30.3078 (2)0.1088 (5)0.76968 (17)0.0436 (5)
C31.0299 (3)0.6249 (7)0.8204 (2)0.0527 (7)
H3B1.13770.62840.80800.063*
C40.9699 (3)0.4388 (7)0.8831 (2)0.0517 (7)
H4A1.03540.31680.91370.062*
C50.8097 (3)0.4382 (5)0.89946 (19)0.0409 (6)
C60.7066 (3)0.6141 (5)0.85681 (19)0.0361 (5)
C70.5322 (3)0.6069 (5)0.87801 (19)0.0373 (6)
H7A0.51790.56330.95460.045*
H7B0.48730.76990.86550.045*
C80.4362 (3)0.4207 (6)0.69632 (18)0.0374 (5)
H8A0.47920.53030.64660.045*
C90.3472 (3)0.2167 (5)0.67313 (19)0.0368 (6)
C100.3059 (3)0.1160 (6)0.5631 (2)0.0438 (6)
C110.1788 (5)−0.2037 (8)0.4633 (3)0.0797 (11)
H11A0.1137−0.34570.47530.120*
H11B0.2749−0.25450.43040.120*
H11C0.1229−0.09040.41490.120*
U11U22U33U12U13U23
N10.0291 (9)0.0382 (11)0.0349 (9)0.0038 (10)0.0041 (7)0.0054 (10)
F10.0558 (9)0.0504 (10)0.0709 (10)0.0116 (9)0.0070 (8)0.0213 (9)
O10.0899 (15)0.0602 (15)0.0430 (10)−0.0071 (15)0.0099 (10)−0.0047 (11)
C10.0411 (13)0.0375 (15)0.0441 (13)0.0042 (12)0.0002 (10)−0.0002 (12)
F20.0514 (9)0.0533 (11)0.0742 (11)0.0048 (9)0.0064 (8)0.0239 (10)
N20.0395 (10)0.0474 (14)0.0406 (11)−0.0038 (11)0.0050 (9)0.0102 (11)
O20.0674 (12)0.0578 (14)0.0587 (11)−0.0161 (13)0.0018 (10)−0.0111 (12)
C20.0450 (14)0.0477 (17)0.0580 (15)−0.0094 (14)0.0106 (12)−0.0005 (15)
N30.0398 (11)0.0470 (13)0.0442 (11)−0.0052 (11)0.0038 (9)0.0076 (11)
C30.0364 (13)0.0589 (19)0.0630 (17)−0.0032 (15)0.0059 (12)−0.0071 (16)
C40.0367 (13)0.0536 (18)0.0644 (16)0.0064 (15)−0.0027 (12)−0.0005 (17)
C50.0380 (12)0.0394 (15)0.0451 (12)0.0027 (13)0.0018 (10)0.0046 (13)
C60.0335 (11)0.0396 (13)0.0353 (11)0.0012 (12)0.0013 (9)−0.0037 (11)
C70.0361 (11)0.0383 (14)0.0377 (11)0.0041 (12)0.0033 (9)−0.0012 (11)
C80.0381 (11)0.0386 (13)0.0361 (11)0.0020 (12)0.0076 (9)0.0045 (12)
C90.0316 (10)0.0386 (14)0.0403 (12)0.0033 (11)0.0042 (9)0.0014 (12)
C100.0438 (13)0.0389 (14)0.0489 (15)0.0073 (13)0.0051 (11)−0.0037 (13)
C110.098 (3)0.068 (3)0.073 (2)−0.016 (2)−0.0032 (19)−0.025 (2)
N1—C81.339 (3)C3—C41.372 (4)
N1—N21.346 (3)C3—H3B0.9300
N1—C71.461 (3)C4—C51.377 (3)
F1—C11.355 (3)C4—H4A0.9300
O1—C101.198 (3)C5—C61.378 (4)
C1—C21.375 (4)C6—C71.507 (3)
C1—C61.376 (4)C7—H7A0.9700
F2—C51.353 (3)C7—H7B0.9700
N2—N31.300 (3)C8—C91.360 (4)
O2—C101.327 (4)C8—H8A0.9300
O2—C111.439 (4)C9—C101.471 (4)
C2—C31.376 (5)C11—H11A0.9600
C2—H2B0.9300C11—H11B0.9600
N3—C91.362 (3)C11—H11C0.9600
C8—N1—N2110.6 (2)C1—C6—C7122.9 (2)
C8—N1—C7129.0 (2)N1—C7—C6111.9 (2)
N2—N1—C7120.43 (18)N1—C7—H7A109.2
F1—C1—C2118.4 (3)C6—C7—H7A109.2
F1—C1—C6117.9 (2)N1—C7—H7B109.2
C2—C1—C6123.7 (3)C6—C7—H7B109.2
N3—N2—N1107.75 (18)H7A—C7—H7B107.9
C10—O2—C11116.1 (3)N1—C8—C9104.6 (2)
C1—C2—C3118.1 (3)N1—C8—H8A127.7
C1—C2—H2B120.9C9—C8—H8A127.7
C3—C2—H2B120.9C8—C9—N3108.9 (2)
N2—N3—C9108.2 (2)C8—C9—C10126.8 (2)
C4—C3—C2121.1 (2)N3—C9—C10124.3 (2)
C4—C3—H3B119.4O1—C10—O2124.5 (3)
C2—C3—H3B119.4O1—C10—C9122.8 (3)
C3—C4—C5118.0 (3)O2—C10—C9112.7 (2)
C3—C4—H4A121.0O2—C11—H11A109.5
C5—C4—H4A121.0O2—C11—H11B109.5
F2—C5—C6117.3 (2)H11A—C11—H11B109.5
F2—C5—C4118.9 (2)O2—C11—H11C109.5
C6—C5—C4123.8 (3)H11A—C11—H11C109.5
C5—C6—C1115.3 (2)H11B—C11—H11C109.5
C5—C6—C7121.8 (2)
C8—N1—N2—N30.0 (3)C8—N1—C7—C6−59.3 (3)
C7—N1—N2—N3−179.3 (2)N2—N1—C7—C6119.9 (2)
F1—C1—C2—C3−179.8 (2)C5—C6—C7—N1−79.4 (3)
C6—C1—C2—C31.1 (4)C1—C6—C7—N1100.6 (3)
N1—N2—N3—C90.1 (3)N2—N1—C8—C9−0.2 (3)
C1—C2—C3—C4−0.7 (5)C7—N1—C8—C9179.1 (2)
C2—C3—C4—C50.3 (4)N1—C8—C9—N30.2 (3)
C3—C4—C5—F2180.0 (2)N1—C8—C9—C10−176.5 (2)
C3—C4—C5—C6−0.3 (4)N2—N3—C9—C8−0.2 (3)
F2—C5—C6—C1−179.7 (2)N2—N3—C9—C10176.6 (2)
C4—C5—C6—C10.6 (4)C11—O2—C10—O13.4 (4)
F2—C5—C6—C70.4 (4)C11—O2—C10—C9−176.1 (3)
C4—C5—C6—C7−179.3 (3)C8—C9—C10—O11.0 (4)
F1—C1—C6—C5179.9 (2)N3—C9—C10—O1−175.3 (3)
C2—C1—C6—C5−1.0 (4)C8—C9—C10—O2−179.4 (2)
F1—C1—C6—C7−0.2 (4)N3—C9—C10—O24.3 (3)
C2—C1—C6—C7178.9 (3)
D—H···AD—HH···AD···AD—H···A
C7—H7B···N3i0.972.623.538 (4)157
C8—H8A···O1ii0.932.353.243 (3)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7B⋯N3i0.972.623.538 (4)157
C8—H8A⋯O1ii0.932.353.243 (3)162

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Rufinamide.

Authors:  Santiago Arroyo
Journal:  Neurotherapeutics       Date:  2007-01       Impact factor: 7.620

  2 in total
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1.  1-[1-(2,1,3-Benzoxadiazol-5-ylmeth-yl)-1H-1,2,3-triazol-4-yl]hexan-1-one.

Authors:  Jessie A Key; Christopher W Cairo; Robert McDonald
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13
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