| Literature DB >> 23284320 |
Justin Nenwa1, Gouet Bebga, Signé Martin, Michel M Bélombé, Mohammed Mbarki, Boniface P T Fokwa.
Abstract
In the title hybrid salt, (C(5)H(7)N(2))[Cr(H(2)O)(2)(C(2)O(4))(2)], the Cr(III) ion is coordinated in a slightly distorted octa-hedral environment by four O atoms from two oxalate ligands in the equatorial plane and by two water O atoms in the axial sites. The 2-amino-pyridinium cation is disordered over two sets of sites in a 0.800 (7):0.200 (7) ratio. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds connect the components into a three-dimensional network. The crystal studied was an inversion twin with components in a ratio 0.75 (2):0.25 (2).Entities:
Year: 2012 PMID: 23284320 PMCID: PMC3515093 DOI: 10.1107/S1600536812040950
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H7N2)[Cr(H2O)2(C2O4)2] | |
| Monoclinic, | Mo |
| Hall symbol: I -2ya | Cell parameters from 3716 reflections |
| θ = 2.4–30.7° | |
| µ = 0.94 mm−1 | |
| β = 99.90 (3)° | Prism, blue |
| 0.23 × 0.15 × 0.10 mm | |
| Bruker SMART APEX CCD diffractometer | 3716 independent reflections |
| Radiation source: fine-focus sealed tube | 3391 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 30.7°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 9645 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3716 reflections | Δρmax = 0.52 e Å−3 |
| 241 parameters | Δρmin = −0.30 e Å−3 |
| 21 restraints | Absolute structure: Flack (1983), 1793 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.25 (2) |
| Experimental. A mixture of 2-aminopyridine (1 mmol, 100 mg) and oxalic acid (2 mmol, 260 mg) was dissolved in 30 ml of ethanol. An aqueous solution (20 ml) of CrCl3.6H2O (1 mmol, 266.5 mg) was added in successive small portions and stirred for 4 h continuously. The final blue-violet solution obtained was left at room temperature and crystals suitable for X-ray diffraction were obtained after a few days. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cr1 | 0.19814 (16) | 0.342519 (16) | 0.68436 (13) | 0.01109 (9) | |
| C11 | 0.2455 (5) | 0.48129 (16) | 0.7396 (4) | 0.0177 (7) | |
| C12 | 0.1032 (5) | 0.47555 (17) | 0.6004 (3) | 0.0195 (7) | |
| O11 | 0.2936 (4) | 0.53790 (12) | 0.7885 (3) | 0.0321 (6) | |
| O12 | 0.0359 (4) | 0.52679 (12) | 0.5348 (3) | 0.0282 (6) | |
| O14 | 0.3031 (4) | 0.42294 (13) | 0.7934 (3) | 0.0183 (5) | |
| O13 | 0.0649 (4) | 0.41336 (12) | 0.5602 (3) | 0.0180 (5) | |
| C21 | 0.2715 (5) | 0.20807 (17) | 0.7621 (3) | 0.0135 (6) | |
| C22 | 0.1519 (5) | 0.20649 (17) | 0.6142 (4) | 0.0145 (6) | |
| O22 | 0.0979 (3) | 0.26575 (12) | 0.5654 (2) | 0.0155 (5) | |
| O21 | 0.3152 (3) | 0.26885 (12) | 0.8085 (2) | 0.0134 (5) | |
| O24 | 0.3136 (5) | 0.15470 (11) | 0.8242 (3) | 0.0221 (7) | |
| O23 | 0.1161 (5) | 0.15033 (11) | 0.5525 (3) | 0.0201 (6) | |
| OW1 | −0.0319 (4) | 0.33987 (10) | 0.7854 (3) | 0.0145 (5) | |
| OW2 | 0.4360 (4) | 0.34394 (10) | 0.5912 (3) | 0.0180 (5) | |
| N1 | 0.2574 (5) | 0.01644 (13) | 0.7419 (4) | 0.0213 (9) | 0.800 (7) |
| H1A | 0.3224 | 0.0271 | 0.8241 | 0.026* | 0.800 (7) |
| H1B | 0.2100 | 0.0492 | 0.6839 | 0.026* | 0.800 (7) |
| N2 | 0.3078 (5) | −0.09776 (18) | 0.7994 (3) | 0.0141 (8) | 0.800 (7) |
| H2 | 0.3733 | −0.0840 | 0.8794 | 0.017* | 0.800 (7) |
| C1 | 0.2309 (6) | −0.04927 (14) | 0.7051 (4) | 0.0134 (8) | 0.800 (7) |
| C6 | 0.1323 (6) | −0.0728 (2) | 0.5772 (4) | 0.0150 (8) | 0.800 (7) |
| H6 | 0.0779 | −0.0409 | 0.5080 | 0.018* | 0.800 (7) |
| C5 | 0.1146 (6) | −0.1417 (2) | 0.5524 (4) | 0.0180 (9) | 0.800 (7) |
| H5 | 0.0494 | −0.1574 | 0.4650 | 0.022* | 0.800 (7) |
| C4 | 0.1916 (6) | −0.19022 (15) | 0.6546 (4) | 0.0161 (9) | 0.800 (7) |
| H4 | 0.1756 | −0.2382 | 0.6383 | 0.019* | 0.800 (7) |
| C3 | 0.2877 (6) | −0.1664 (2) | 0.7750 (4) | 0.0152 (9) | 0.800 (7) |
| H3 | 0.3429 | −0.1980 | 0.8447 | 0.018* | 0.800 (7) |
| N1A | 0.161 (2) | 0.0179 (4) | 0.6157 (15) | 0.031 (4)* | 0.200 (7) |
| H1A1 | 0.2089 | 0.0479 | 0.6796 | 0.037* | 0.200 (7) |
| H1A2 | 0.0995 | 0.0323 | 0.5348 | 0.037* | 0.200 (7) |
| N2A | 0.275 (2) | −0.0690 (6) | 0.7682 (10) | 0.021 (3)* | 0.200 (7) |
| H2A1 | 0.3211 | −0.0370 | 0.8285 | 0.025* | 0.200 (7) |
| C1A | 0.180 (2) | −0.0492 (4) | 0.6414 (12) | 0.011 (3)* | 0.200 (7) |
| C6A | 0.101 (2) | −0.1015 (6) | 0.5499 (9) | 0.007 (3)* | 0.200 (7) |
| H6A | 0.0292 | −0.0900 | 0.4617 | 0.009* | 0.200 (7) |
| C5A | 0.129 (3) | −0.1687 (5) | 0.5876 (14) | 0.024 (5)* | 0.200 (7) |
| H5A | 0.0816 | −0.2039 | 0.5234 | 0.028* | 0.200 (7) |
| C4A | 0.227 (2) | −0.1868 (5) | 0.7210 (16) | 0.020 (4)* | 0.200 (7) |
| H4A | 0.2377 | −0.2335 | 0.7498 | 0.024* | 0.200 (7) |
| C3A | 0.303 (2) | −0.1361 (7) | 0.8054 (11) | 0.018 (4)* | 0.200 (7) |
| H3A | 0.3775 | −0.1471 | 0.8930 | 0.022* | 0.200 (7) |
| HW1A | 0.016 (6) | 0.3359 (17) | 0.867 (2) | 0.028* | |
| HW1B | −0.099 (5) | 0.3728 (13) | 0.764 (4) | 0.028* | |
| HW2A | 0.406 (6) | 0.3418 (16) | 0.5044 (19) | 0.028* | |
| HW2B | 0.485 (5) | 0.3815 (12) | 0.600 (4) | 0.028* |
| Cr1 | 0.01435 (16) | 0.00763 (14) | 0.01064 (15) | 0.0002 (2) | 0.00028 (11) | 0.0000 (2) |
| C11 | 0.0265 (17) | 0.0098 (12) | 0.0212 (14) | −0.0049 (11) | 0.0168 (13) | −0.0041 (10) |
| C12 | 0.0276 (17) | 0.0154 (15) | 0.0190 (15) | 0.0026 (12) | 0.0138 (13) | 0.0021 (12) |
| O11 | 0.0492 (16) | 0.0181 (11) | 0.0355 (14) | −0.0159 (10) | 0.0257 (12) | −0.0135 (10) |
| O12 | 0.0499 (15) | 0.0123 (10) | 0.0273 (12) | 0.0118 (10) | 0.0205 (11) | 0.0068 (9) |
| O14 | 0.0220 (11) | 0.0174 (12) | 0.0157 (10) | −0.0056 (9) | 0.0036 (9) | −0.0046 (9) |
| O13 | 0.0271 (13) | 0.0100 (11) | 0.0181 (11) | 0.0048 (8) | 0.0071 (10) | 0.0029 (8) |
| C21 | 0.0142 (13) | 0.0143 (15) | 0.0134 (13) | 0.0026 (11) | 0.0067 (10) | 0.0014 (11) |
| C22 | 0.0155 (14) | 0.0128 (14) | 0.0167 (14) | −0.0029 (11) | 0.0068 (11) | −0.0014 (11) |
| O22 | 0.0213 (12) | 0.0118 (12) | 0.0133 (10) | −0.0012 (8) | 0.0029 (9) | −0.0013 (8) |
| O21 | 0.0150 (10) | 0.0115 (11) | 0.0126 (10) | 0.0021 (8) | −0.0008 (8) | 0.0015 (8) |
| O24 | 0.0332 (15) | 0.0117 (12) | 0.0247 (14) | 0.0056 (9) | 0.0147 (11) | 0.0070 (8) |
| O23 | 0.0277 (13) | 0.0115 (11) | 0.0239 (13) | −0.0059 (9) | 0.0121 (10) | −0.0076 (8) |
| OW1 | 0.0145 (12) | 0.0110 (11) | 0.0185 (12) | 0.0034 (7) | 0.0047 (10) | 0.0008 (7) |
| OW2 | 0.0208 (14) | 0.0133 (12) | 0.0198 (12) | −0.0025 (7) | 0.0031 (10) | −0.0011 (7) |
| N1 | 0.0254 (17) | 0.0137 (14) | 0.0246 (16) | −0.0009 (11) | 0.0033 (13) | −0.0023 (11) |
| N2 | 0.0150 (15) | 0.0179 (19) | 0.0084 (13) | 0.0007 (12) | −0.0013 (11) | 0.0031 (12) |
| C1 | 0.016 (2) | 0.0140 (14) | 0.011 (2) | 0.0005 (12) | 0.0032 (15) | 0.0028 (12) |
| C6 | 0.0124 (17) | 0.020 (2) | 0.0107 (16) | 0.0040 (14) | −0.0026 (13) | −0.0003 (15) |
| C5 | 0.0127 (17) | 0.024 (2) | 0.0158 (18) | 0.0029 (16) | −0.0016 (13) | −0.0073 (16) |
| C4 | 0.0159 (18) | 0.0116 (14) | 0.020 (2) | −0.0013 (14) | 0.0019 (19) | −0.0036 (12) |
| C3 | 0.0151 (18) | 0.0116 (17) | 0.0193 (19) | −0.0014 (14) | 0.0039 (14) | −0.0011 (14) |
| Cr1—O22 | 1.949 (2) | N2—C1 | 1.364 (4) |
| Cr1—O13 | 1.960 (2) | N2—H2 | 0.8800 |
| Cr1—O14 | 1.962 (2) | C1—C6 | 1.402 (5) |
| Cr1—O21 | 1.963 (2) | C6—C5 | 1.363 (5) |
| Cr1—OW2 | 2.006 (3) | C6—H6 | 0.9500 |
| Cr1—OW1 | 2.007 (3) | C5—C4 | 1.414 (5) |
| C11—O11 | 1.223 (4) | C5—H5 | 0.9500 |
| C11—O14 | 1.285 (4) | C4—C3 | 1.337 (5) |
| C11—C12 | 1.545 (4) | C4—H4 | 0.9500 |
| C12—O12 | 1.233 (4) | C3—H3 | 0.9500 |
| C12—O13 | 1.285 (4) | N1A—C1A | 1.331 (4) |
| C21—O24 | 1.214 (4) | N1A—H1A1 | 0.8800 |
| C21—O21 | 1.283 (4) | N1A—H1A2 | 0.8800 |
| C21—C22 | 1.545 (3) | N2A—C3A | 1.359 (5) |
| C22—O23 | 1.253 (4) | N2A—C1A | 1.363 (5) |
| C22—O22 | 1.278 (4) | N2A—H2A1 | 0.8800 |
| OW1—HW1A | 0.816 (18) | C1A—C6A | 1.402 (5) |
| OW1—HW1B | 0.796 (18) | C6A—C5A | 1.363 (5) |
| OW2—HW2A | 0.846 (18) | C6A—H6A | 0.9500 |
| OW2—HW2B | 0.803 (18) | C5A—C4A | 1.414 (6) |
| N1—C1 | 1.331 (3) | C5A—H5A | 0.9500 |
| N1—H1A | 0.8800 | C4A—C3A | 1.337 (6) |
| N1—H1B | 0.8800 | C4A—H4A | 0.9500 |
| N2—C3 | 1.358 (4) | C3A—H3A | 0.9500 |
| O22—Cr1—O13 | 94.80 (11) | C3—N2—C1 | 122.9 (3) |
| O22—Cr1—O14 | 176.23 (12) | C3—N2—H2 | 118.6 |
| O13—Cr1—O14 | 82.55 (9) | C1—N2—H2 | 118.6 |
| O22—Cr1—O21 | 83.15 (7) | N1—C1—N2 | 117.3 (4) |
| O13—Cr1—O21 | 176.38 (11) | N1—C1—C6 | 125.5 (4) |
| O14—Cr1—O21 | 99.63 (11) | N2—C1—C6 | 117.2 (3) |
| O22—Cr1—OW2 | 88.05 (9) | C5—C6—C1 | 119.8 (3) |
| O13—Cr1—OW2 | 91.94 (10) | C5—C6—H6 | 120.1 |
| O14—Cr1—OW2 | 89.36 (10) | C1—C6—H6 | 120.1 |
| O21—Cr1—OW2 | 90.98 (10) | C6—C5—C4 | 121.1 (3) |
| O22—Cr1—OW1 | 93.02 (9) | C6—C5—H5 | 119.5 |
| O13—Cr1—OW1 | 90.31 (10) | C4—C5—H5 | 119.5 |
| O14—Cr1—OW1 | 89.68 (10) | C3—C4—C5 | 117.9 (3) |
| O21—Cr1—OW1 | 86.82 (9) | C3—C4—H4 | 121.0 |
| OW2—Cr1—OW1 | 177.42 (14) | C5—C4—H4 | 121.0 |
| O11—C11—O14 | 126.0 (4) | C4—C3—N2 | 121.1 (3) |
| O11—C11—C12 | 120.1 (3) | C4—C3—H3 | 119.4 |
| O14—C11—C12 | 113.9 (3) | N2—C3—H3 | 119.4 |
| O12—C12—O13 | 124.1 (3) | C1A—N1A—H1A1 | 120.0 |
| O12—C12—C11 | 122.0 (3) | C1A—N1A—H1A2 | 120.0 |
| O13—C12—C11 | 114.0 (3) | H1A1—N1A—H1A2 | 120.0 |
| C11—O14—Cr1 | 114.8 (2) | C3A—N2A—C1A | 122.7 (4) |
| C12—O13—Cr1 | 114.8 (2) | C3A—N2A—H2A1 | 118.6 |
| O24—C21—O21 | 125.9 (3) | C1A—N2A—H2A1 | 118.6 |
| O24—C21—C22 | 120.0 (4) | N1A—C1A—N2A | 117.8 (5) |
| O21—C21—C22 | 114.1 (3) | N1A—C1A—C6A | 125.0 (5) |
| O23—C22—O22 | 125.6 (4) | N2A—C1A—C6A | 117.1 (3) |
| O23—C22—C21 | 120.2 (4) | C5A—C6A—C1A | 120.0 (4) |
| O22—C22—C21 | 114.2 (3) | C5A—C6A—H6A | 120.0 |
| C22—O22—Cr1 | 114.4 (2) | C1A—C6A—H6A | 120.0 |
| C21—O21—Cr1 | 113.8 (2) | C6A—C5A—C4A | 120.9 (4) |
| Cr1—OW1—HW1A | 106 (3) | C6A—C5A—H5A | 119.6 |
| Cr1—OW1—HW1B | 108 (3) | C4A—C5A—H5A | 119.6 |
| HW1A—OW1—HW1B | 117 (3) | C3A—C4A—C5A | 117.8 (4) |
| Cr1—OW2—HW2A | 113 (3) | C3A—C4A—H4A | 121.1 |
| Cr1—OW2—HW2B | 109 (3) | C5A—C4A—H4A | 121.1 |
| HW2A—OW2—HW2B | 100 (3) | C4A—C3A—N2A | 121.3 (4) |
| C1—N1—H1A | 120.0 | C4A—C3A—H3A | 119.4 |
| C1—N1—H1B | 120.0 | N2A—C3A—H3A | 119.4 |
| H1A—N1—H1B | 120.0 |
| H··· | ||||
| O | 0.82 (2) | 1.86 (2) | 2.660 (4) | 166 (3) |
| O | 0.80 (2) | 1.92 (2) | 2.663 (3) | 156 (4) |
| O | 0.85 (2) | 1.78 (2) | 2.621 (4) | 172 (4) |
| O | 0.80 (2) | 1.95 (2) | 2.687 (3) | 153 (4) |
| N1—H1 | 0.88 | 2.33 | 3.183 (5) | 164 |
| N1—H1 | 0.88 | 2.38 | 3.251 (4) | 171 |
| N2—H2···O13v | 0.88 | 2.02 | 2.865 (3) | 159 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O | 0.82 (2) | 1.86 (2) | 2.660 (4) | 166 (3) |
| O | 0.80 (2) | 1.92 (2) | 2.663 (3) | 156 (4) |
| O | 0.85 (2) | 1.78 (2) | 2.621 (4) | 172 (4) |
| O | 0.80 (2) | 1.95 (2) | 2.687 (3) | 153 (4) |
| N1—H1 | 0.88 | 2.33 | 3.183 (5) | 164 |
| N1—H1 | 0.88 | 2.38 | 3.251 (4) | 171 |
| N2—H2⋯O13v | 0.88 | 2.02 | 2.865 (3) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .