Literature DB >> 23256581

Highlightable Ca2+ indicators for live cell imaging.

Hiofan Hoi1, Tomoki Matsuda, Takeharu Nagai, Robert E Campbell.   

Abstract

Two of the most powerful implementations of fluorescent protein (FP) technology are "highlighters", which can be converted from nonfluorescent to fluorescent or from one color to another by illumination, and calcium ion (Ca(2+)) indicators. Combining the properties of both of these FP classes into a single construct would produce a highlightable Ca(2+) indicator that would enable researchers to mark a single cell spectrally in a transfected tissue and image its intracellular Ca(2+) dynamics. In an effort to create such a hybrid tool, we explored three different protein design strategies. The strategy that ultimately proved successful involved the creation of a circularly permuted version of a green-to-red photoconvertible FP and its introduction into a G-CaMP-type single-FP-based Ca(2+) indicator. Optimization by directed evolution led to the identification of two promising variants that exhibit excellent photoconversion properties and have an up to 4.6-fold increase in red fluorescence intensity upon binding of Ca(2+). We demonstrate the utility of these variants in HeLa cells and rat hippocampal neurons.

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Year:  2012        PMID: 23256581     DOI: 10.1021/ja310184a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  22 in total

1.  Red fluorescent proteins (RFPs) and RFP-based biosensors for neuronal imaging applications.

Authors:  Yi Shen; Tiffany Lai; Robert E Campbell
Journal:  Neurophotonics       Date:  2015-06-19       Impact factor: 3.593

2.  All-optical functional synaptic connectivity mapping in acute brain slices using the calcium integrator CaMPARI.

Authors:  Timothy A Zolnik; Fern Sha; Friedrich W Johenning; Eric R Schreiter; Loren L Looger; Matthew E Larkum; Robert N S Sachdev
Journal:  J Physiol       Date:  2016-12-14       Impact factor: 5.182

Review 3.  Phototransformable fluorescent proteins: which one for which application?

Authors:  Virgile Adam
Journal:  Histochem Cell Biol       Date:  2014-02-13       Impact factor: 4.304

Review 4.  The Growing and Glowing Toolbox of Fluorescent and Photoactive Proteins.

Authors:  Erik A Rodriguez; Robert E Campbell; John Y Lin; Michael Z Lin; Atsushi Miyawaki; Amy E Palmer; Xiaokun Shu; Jin Zhang; Roger Y Tsien
Journal:  Trends Biochem Sci       Date:  2016-11-01       Impact factor: 13.807

5.  A long Stokes shift red fluorescent Ca2+ indicator protein for two-photon and ratiometric imaging.

Authors:  Jiahui Wu; Ahmed S Abdelfattah; Loïs S Miraucourt; Elena Kutsarova; Araya Ruangkittisakul; Hang Zhou; Klaus Ballanyi; Geoffrey Wicks; Mikhail Drobizhev; Aleksander Rebane; Edward S Ruthazer; Robert E Campbell
Journal:  Nat Commun       Date:  2014-10-31       Impact factor: 14.919

Review 6.  Multiparameter in vivo imaging in plants using genetically encoded fluorescent indicator multiplexing.

Authors:  Rainer Waadt; Jörg Kudla; Hannes Kollist
Journal:  Plant Physiol       Date:  2021-10-05       Impact factor: 8.005

Review 7.  Genetically encoded indicators of neuronal activity.

Authors:  Michael Z Lin; Mark J Schnitzer
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

Review 8.  Applications of phototransformable fluorescent proteins for tracking the dynamics of cellular components.

Authors:  Ina Nemet; Philip Ropelewski; Yoshikazu Imanishi
Journal:  Photochem Photobiol Sci       Date:  2015-10       Impact factor: 3.982

9.  SI-MOIRAI: a new method to identify and quantify the metabolic fate of nucleotides.

Authors:  Yoshiki Ikeda; Akiyoshi Hirayama; Satoshi Kofuji; Yoshihisa Hirota; Ryo Kamata; Natsuki Osaka; Yuki Fujii; Mika Sasaki; Satsuki Ikeda; Eric P Smith; Robert Bachoo; Tomoyoshi Soga; Atsuo T Sasaki
Journal:  J Biochem       Date:  2022-01-07       Impact factor: 3.241

Review 10.  Prey capture in zebrafish larvae serves as a model to study cognitive functions.

Authors:  Akira Muto; Koichi Kawakami
Journal:  Front Neural Circuits       Date:  2013-06-11       Impact factor: 3.492

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